Difference between revisions of "BGIOSGA011524"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA011524| Description = ESTs AU031435(E61570)| Definition = Oryza sativa Indica Group BGIOSGA011524, complete gene.| tag = | tid = BGIOSGA01...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA011524|
 
GeneName = BGIOSGA011524|

Revision as of 15:40, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011524

Description

ESTs AU031435(E61570)

Definition

Oryza sativa Indica Group BGIOSGA011524, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA011524-TA

Ensembl Protein ID

BGIOSGA011524-PA

Length

6256

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1955297..1961552

Sequence Coding Region

1961131..1961552,1960028..1960241),complement(1958463..1958534,1958217..1958288),complement(1957993..1958091
,1957815..1957886),complement(1957618..1957732,1957433..1957501),complement(1956609..1956912
,1955823..1955934),complement(1955297..1955740

Genome Context

<gbrowseImage1> name=IndicaChromosome03:1955297..1961552 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:1955297..1961552 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGCACCTGCTGGTTGGCGAGGAGGCAATGTTGGTTCCGTTGGAGGTCTCCCGCAAGCTACTCCAGGAGCAACTGCTCCACAACAAGCAACACCGGGTGGATTTGGTCTTACATTGTCTAGTACAATGGGCATGGCTCCCGGACAACAGGCACAAGGAACGCCTCCTTCGTCAATGCCACCACAAAGCAACAGTGCTGTATCAGCTCAAGATTCGAAAGCTTTGGTGCTGTCTGGAAATGGCTCTGCCAGTGGCTTAGGAGCAAGCAATGACATCTTCTCTGCTCTTACTCAGCCTAAGTCGAATGTATCCACACTTTCATTTCCGACGAGCATGGCTCCTAATTCATCCAGTTTTATAGTCCACACCATCTGGCTCCCAGAACCTGTTGAATCTAGCTCAGTTTGGTTCTCAACAAGGACTGCACACAAGGGTCCTGGAGCAGCTGGGATGCCTGCTACTGGTGTGCGGCAACCTTTGCCACCACATTTGCAGGCACAGATGGATGGTGCTAACAGACCANGGCAACCAAGACCTCACATGCCTGGTATGGATAACCATGCAGCACCTCAAGCAAATAAAGATGACGGAAGTGGAGCGAACTCAGCTGTGCAGGAGGATGCCCCTAAGAAGGTTGAGGTGGAGAAGCAAGTCCTAGATTCCAGAGAGAAACTAGAATACTACCGTACAAAGATGCAAGATCTTGTTCTGTACAAAAGTCGGTGTGACAACAGGCTGAATGAAATCACAGAAAGGGCATCCTCTGATAAACGTGAGGTGGAATCATTAGCTAAGAAGTATGAAGAGAAATACAAGCAAGTGGCAGAGTTAGCTTCCAAACTGGCAGTTGAAGAACATGCCTTCCGTGATGTTCAGGAGAGGAAAGTTGAACTGCATGATGCATTAGTTAAAATGGTACAAGGTGGAAGTGTTGATGGTTTGCTTCAGGTTCGAGCTGATCGAATCCAATACCAATTAGAGGAGATGGAGAAAGCTTTTAGTGAACGGTGCAAGCACTTTGGACTGCAGTTCAAGCCATCTGCATCAGTTGAGCTTCCTTTTGGTTGGGAACCTGGGAAGCAAGAGGGGGCAATTGAGTGGGATGAAGACTGGGACAAATTTGAGGATGAAGGGTTTGGTTTTGTAAAGGACAATGGTACAATTGTTGAAAACCCAGTTGCTTCTGAAAATGTGAAAGTACCATCTCTCTGGAATGATATGGATGAGAGCCCTGTTGCATCTTCGAACGGTCACATCAAGGCTGAGAGACATTACAGAGCTGGTGATCATGCAGCTGAGAGTGACTTAGGGTATGATTTTGGTGAGGAATCTGTAAGGAGCCCCAGCAGTGCTGGAAGAAGTGCATCTGGAAGTCCATTTGTGTCTTCAAATTTTGCGATGCATGACTCATCTCCCAGCAAAAAGGAAACCTACAGTGACCATGGTGGTTCTGAATCCATTTTTGGTGACAAATATGCCGATGAAACCTCCTGGAACTTTGATGACCAAGACACTGAATCTGTTTGGGGATCTAATGCAATGAACAACGAGTCTGACCATCATGGAAGTGCACACAACTCTTTCTTTGGGTCAGATGACTTCGGTGTAAATCCTGTTAGGGTGGGCTCTCCAAGTGGTGCCAGTACCTATGGAAAGAAGAAAAGTTCATTCTTTGATGATTCTGTTCCAAGTTCACCTGCATACACATCTGGATTCTCACCAAAATTCAGTGAAAGCCGCGATGATAGCTCCTCATATAACTTTGGAAGGTTCGATTCCTTCAGATCCCAGGAGAGCGGATTCTTCCCTCAGGAAAGTCGTTTTTCCAGGTTTGACTCCATAAACAACTCCAAAGGTGAGAATGTAACTGGATTCGATTCACCGAAAAGCTCAACAAATTTCGGTCGGTTTGATTCTTTTGATGATGCCGATCCATTTGGTTCAAGTGGACCCTTTAAAGCATCAGGTAGCAGGTCTCCCCCCAAATTCTGA</cdnaseq>

Protein Sequence

<aaseq>MGAPAGWRGGNVGSVGGLPQATPGATAPQQATPGGFGLTLSSTMGMAPGQQAQGTPPSSMPPQSNSAVSAQDSKALVLSGNGSASGLGASNDIFSALTQPKSNVSTLSFPTSMAPNSSSFIVHTIWLPEPVESSSVWFSTRTAHKGPGAAGMPATGVRQPLPPHLQAQMDGANRPXQPRPHMPGMDNHAAPQANKDDGSGANSAVQEDAPKKVEVEKQVLDSREKLEYYRTKMQDLVLYKSRCDNRLNEITERASSDKREVESLAKKYEEKYKQVAELASKLAVEEHAFRDVQERKVELHDALVKMVQGGSVDGLLQVRADRIQYQLEEMEKAFSERCKHFGLQFKPSASVELPFGWEPGKQEGAIEWDEDWDKFEDEGFGFVKDNGTIVENPVASENVKVPSLWNDMDESPVASSNGHIKAERHYRAGDHAAESDLGYDFGEESVRSPSSAGRSASGSPFVSSNFAMHDSSPSKKETYSDHGGSESIFGDKYADETSWNFDDQDTESVWGSNAMNNESDHHGSAHNSFFGSDDFGVNPVRVGSPSGASTYGKKKSSFFDDSVPSSPAYTSGFSPKFSESRDDSSSYNFGRFDSFRSQESGFFPQESRFSRFDSINNSKGENVTGFDSPKSSTNFGRFDSFDDADPFGSSGPFKASGSRSPPKF</aaseq>

Gene Sequence

<dnaseqindica>1..422#1312..1525#3019..3090#3265..3336#3462..3560#3667..3738#3821..3935#4052..4120#4641..4944#5619..5730#5813..6256#ATGGGAGCACCTGCTGGTTGGCGAGGAGGCAATGTTGGTTCCGTTGGAGGTCTCCCGCAAGCTACTCCAGGAGCAACTGCTCCACAACAAGCAACACCGGGTGGATTTGGTCTTACATTGTCTAGTACAATGGGCATGGCTCCCGGACAACAGGCACAAGGAACGCCTCCTTCGTCAATGCCACCACAAAGCAACAGTGCTGTATCAGCTCAAGATTCGAAAGCTTTGGTGCTGTCTGGAAATGGCTCTGCCAGTGGCTTAGGAGCAAGCAATGACATCTTCTCTGCTCTTACTCAGCCTAAGTCGAATGTATCCACACTTTCATTTCCGACGAGCATGGCTCCTAATTCATCCAGTTTTATAGTCCACACCATCTGGCTCCCAGAACCTGTTGAATCTAGCTCAGTTTGGTTCTCAACAAGGTATTCCGACAGTGAGTTCTGGTGGCAGTCAACCTCAACAGACTCATCCCATCACAAAGCCGAGTGTTCCAGCACCAACTGTATCTGGTGTTTCTGCTGGAGTTTCTAATTCAGCTTCTCAATGGCCAAAAGTTACTCAGTCTGACATCCAGAAGTACACTAAAGTCTTTGCGGATGTTGATAGGGACAGAGATGGCAAAATAACTGGCGCGGAAGCTCGCACCCTGTTCCTCAGTTGGAGACTTCCAAGAGGTGGGATCTCATGACTAGCATTTAATTCTTCTAACTCCTAAGTATGCAAATGCTTGTTTCTGTCTGTAAGATACTCTAATTCCTTTCTTTTGTGAAGTTCTTGTACACATTTTCTGTTTTAGCTTATTGTTTTACGCTGATTTGTTATGTTTACTGGCATAATACTTGTGGTGTAGGTTATAATTTCGACTAATTCTATTTCTATGATAGTTTTCTTAAGATGCCAAACATATCCCCTTGGGGATGGAGTTCTGTTGCAAACGTCTAATGCAAGTGATGTTCTTCTATAATTTTCAGAGATTCTGAAGCAAGTGTGGGACCTGTCTGACCAAGATAATGATGGCATGCTTTCTTTGAGAGAGTTTGCATTGCTCTTTATTTGATGGAGAGGCACCGAGCTGGAACTCCTTTGCCTCCAGCACTTCCTGACTCTCTTAAATATGATGAGGTACTGCTGCGTGCAACAGGCTTGTCTTCAACAGCATACAACGGCCCGTCATGGCAACAAAATCAAGGTAAGTGATAATACTGGCTACCAGATTTCAATTATTATTTCATAACTTTGTCACAACATGATATCTTGTGTCTACCTCTCGTTGTGCTCTCTTCGCTCATAAGGTATTTTATGTTGGGCCAGGACTGCACACAAGGGTCCTGGAGCAGCTGGGATGCCTGCTACTGGTGTGCGGCAACCTTTGCCACCACATTTGCAGGCACAGATGGATGGTGCTAACAGACCANGGCAACCAAGACCTCACATGCCTGGTATGGATAACCATGCAGCACCTCAAGCAAATAAAGATGACGGAAGTGGAGCGAACTCAGCTGTGCAGGAGGATGCCCCTAAGAAGGTATTTGATCACTTCCTTAAATCCTGAACTGTCTGTACTGAAGCTGGTTGATCTAAATATCAGTCCTGATCCACTTTGAGCAGGCTAATTCTTCAATGGTAAACAGTGGGCTGATGCACATATATAATGGTTAAAGGACAGTCTTATTATTCATTCAATGCGAAGCGGAACTCGTATGATAGTGATCCAAATAATACTGTGCATGACGTAATGGAGCAATAGCTTTGTCGTAACGGATGGTAGGGTGTGTTCACACGAGGAATCGTGCAATTGTTGAAGAAAGAAGCAAGCAATCTTTACTCTTATGAAAGTGGTGATTGGGGGTTATGGTGTGTGCGACAGTCAATCCCCGACTTAGATATTTTGTGATTGCAAACATGTAGGCATATGCATACTGTCTCGAATGATTTTTACAAAGATCAATGCTTATATCCACACGAGTACACGCATATGGTTGATCGGTATCATGTAGTCACATATACAATAATTTAGATTACCCGGATAGTTACTTATTTATTTATTTATTTAATTAATTGCGTTTATGCACTCTGAAACATTATTATCTGCTGCGACACATGGGAAAGATGCTAGTTTAACCATAGTAGCTAAATCAAGAGGCAAATACCACATATGATACAGAGTTATGTATGAACTTTCTGTTGGTAGTTGTTTATGAAAGAGTAAAGTGCATGGGTGGTCCCTAAACTTGTGTGGGTGTGTCAACTAGGTCCCTGAACTCTCAACATGAATTTTTGGGTCCCTCAATTTGTCTCGGGTGTCATGTAGGTCCCAATGGGTTCCAACCCACTCCGTGTGCTGACGTGGGATGACATAGTGGCACCTACATGTCAGTGGAACCCATATGTCAGCCACAACAAGAAAAAATTAAGAACATATTTTTTTCTCCTCTCTTTTTTCATTTATTTTTTCAAAATTAAAAACATCCTTTTCTTCTCTCTCTCCTCTCTTTTTAAATTTATTTTTTTCTATATGACTGACATGTGGATCCACTGACACGTAAGTGTCACTGTGACATGCCACATCATCTCATGGAGCGGGTTGGAGCCCGTTTGGACCTATATGACACTCATGACAAGTTTGGGGACCCAAAAAATTCATTTTGATAGTTTAGGGACCTAGATGATACATCCGTACAAGTTTAAGGACCGCCTGTGCACTTCACTCCTTATGAAATTATTTCATCCCCCACTAATGTCTTTATGAAATTCTGACTTTGTGCCATACAAGTTTCCATTCCATGCATTATTAAGTTGACTGATATATGCTGATACTCTGTTTCTTGGCACTCATCGATTGCAAGTTCAGGATAGCTTTTTTCTCTTGATTAAGTGATATTATTATCTTTTTGTACCTTCCATCCCAACTTCCTATAAATGACAGTTAGAGCCGTAAGTATTGCTTAATATATGTTATATTTTGCTCTTTTACGAACTTTGAAACAAATTGTCTTTTGTCTCTTTTGCATTGTGAAGGTTGAGGTGGAGAAGCAAGTCCTAGATTCCAGAGAGAAACTAGAATACTACCGTACAAAGATGCAAGATCTTGTAAGCACACTTGTAATCTCTTACTAGTTTTCATGTGCAAAATGATTTGGTTAATTAAAGTAATTCTGGCTTGTACATGTGCTGATTTTTTAAATGAACATAACTAGGTTGCTGAAAATTGATTTATTAATGTGATTTAGTTATCATTCCTTTATTTGTTTTGTCTTGTCGAAGGTTCTGTACAAAAGTCGGTGTGACAACAGGCTGAATGAAATCACAGAAAGGGCATCCTCTGATAAACGTGAGGTACAGAACATGCTTATTACTTTATCCCCTTTTGGGGCCGTTTGATCTTGCTTTTAAATATTTGGAAGCATGTTAGGAATCATTAATTTGTAACACACTGATGGGCGATTTTTATTTTAATTCAGGTGGAATCATTAGCTAAGAAGTATGAAGAGAAATACAAGCAAGTGGCAGAGTTAGCTTCCAAACTGGCAGTTGAAGAACATGCCTTCCGTGATGTTCAGGTTGCTCTGCGCTGCACCGCATAAAATTACCACTTGAATTTTTTGCTGCAATCTTCTTATCTCTTGTCTCTCTGTGTTGAATCAAAGTTGGTTGGTTTTTGTTCAGGAGAGGAAAGTTGAACTGCATGATGCATTAGTTAAAATGGTACAAGGTGGAAGTGTTGATGGTTTGCTTCAGGTATGTTCTAACTTTGTTAGGTACTTAGGTGTTGTCACCTATCTCTCTTGAATAACACTGTGCACTGTTCCACTGTTCCTAGGTTCGAGCTGATCGAATCCAATACCAATTAGAGGAGATGGAGAAAGCTTTTAGTGAACGGTGCAAGCACTTTGGACTGCAGTTCAAGCCATCTGCATCAGTTGAGCTTCCTTTTGGTACTACACTATCCAACTCCTGGCATGTTATCAGTAGAACAAAATACTGCCCTAGTGCAATTTCACTTCCTGCATTCTTCAGATACATAATCTGCGAGTTTGTCCTTGTTTGTTAGGTTGGGAACCTGGGAAGCAAGAGGGGGCAATTGAGTGGGATGAAGACTGGGACAAATTTGAGGATGAAGGTAAAATAACGCTTTCATGCCATCCTGCCTGATATTGTTATTGCTTAAGAATACTTGAAATGAATTGATTTCCTATTATATTGAAGTTGAAAACTTTGTTTATTCAATCCAAACCAGTAAGTAATTCTTGAATGATTTAAATGTCTGCCATTTATCTTCTCTGAGTTGTTGCTAATGGCAGCTATTTTGCATCTTAAATAATAAAGCATGACTGTGTTTATGACTATTATATAGTGTGTGGTACAACTTTTAAATGTAAATTATGTAGATAAAATTTACTCGGTATTCTTATCATTCTGTTGATTACCCACTGCTCATATTTAGGATAGCAGGGCAATCTGTTCAGTAACAAATGTTTCTCACTAGAACATTGATGGTATGGCAGTAAACATGTTTGGTAGTAAAGATAACACACATCTCAATCACATTAGCTTCATTCGTTCAGATTTAGTGTCTTCTACTTGGTCAACCTAATTCTCTCTTTTTTCAGTTTATCTGACTAAATCATATATTTTAACAGGGTTTGGTTTTGTAAAGGACAATGGTACAATTGTTGAAAACCCAGTTGCTTCTGAAAATGTGAAAGTACCATCTCTCTGGAATGATATGGATGAGAGCCCTGTTGCATCTTCGAACGGTCACATCAAGGCTGAGAGACATTACAGAGCTGGTGATCATGCAGCTGAGAGTGACTTAGGGTATGATTTTGGTGAGGAATCTGTAAGGAGCCCCAGCAGTGCTGGAAGAAGTGCATCTGGAAGTCCATTTGTGTCTTCAAATTTTGCGATGCATGACTCATCTCCCAGCAAAAAGGAAACCTACAGGTACAAGTTTTCCCATTTTGGATAGTGCACAATTCTTATTCTATAATGTTTGACTTGCTACCTACATGATCACTAGAACTGAGATATGCCAGGCATAGTTTAATTGAACAGAATGGGCTGTATTTACAAATTTGAAACAAGTCAGCATGTTTCTCTGCAGTATAGTGCTGAGCCATCTGGTGCCACAACATGGGTCCACTTTCAGTATCCTATTCTAGTCCACTTGTAAATAGTTCATGTATTGCTCTGGCTATAAGCCTTCCATCTTGCGAGGCTGTGACAGGTTTTCTCCAATGGATGGAAGCTTAGGGTTTCCTTAGTTCCATATGTTCCTAGCATGACTGCATGAGTCAAGATTATCCATAGGGTTTCTTTAGCAGCAGTCGATCATGATGGGTAGCTGGATACCATGTCGTTCACACATTAAATTTTCTGTACACCAGATTCCCTCACCTTATTTTAACAAAAGAAAATATAGTAGGAATGCATGATATTCAGCATTGTTTCGTACTTCCTAGAAATGCGTCTCCACGGTCTTTACACTGTATGAGTGCATGTGCTGACCGTTTGTGGAAAAGATTCTGTAGAATGCTCAATTGTGATCATACCTTAGATAGTATTGAACCATGTAATTTTAAATTTTGTCTTGTCACTTATTGTTATTTCTGTCACAGTGACCATGGTGGTTCTGAATCCATTTTTGGTGACAAATATGCCGATGAAACCTCCTGGAACTTTGATGACCAAGACACTGAATCTGTTTGGGGATCTAATGCAATGAACAACGTGAGTTACATAGCTTCTTTCCAGTTGTGGTTTCTGAGCATGTCAACCCCTTTTCTGTTTCTTATGAGCTGCATTGATACAGGAGTCTGACCATCATGGAAGTGCACACAACTCTTTCTTTGGGTCAGATGACTTCGGTGTAAATCCTGTTAGGGTGGGCTCTCCAAGTGGTGCCAGTACCTATGGAAAGAAGAAAAGTTCATTCTTTGATGATTCTGTTCCAAGTTCACCTGCATACACATCTGGATTCTCACCAAAATTCAGTGAAAGCCGCGATGATAGCTCCTCATATAACTTTGGAAGGTTCGATTCCTTCAGATCCCAGGAGAGCGGATTCTTCCCTCAGGAAAGTCGTTTTTCCAGGTTTGACTCCATAAACAACTCCAAAGGTGAGAATGTAACTGGATTCGATTCACCGAAAAGCTCAACAAATTTCGGTCGGTTTGATTCTTTTGATGATGCCGATCCATTTGGTTCAAGTGGACCCTTTAAAGCATCAGGTAGCAGGTCTCCCCCCAAATTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011524