Difference between revisions of "BGIOSGA012219"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA012219| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA012219, complete gene.| tag = OsI_107...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA012219|
 
GeneName = BGIOSGA012219|

Revision as of 15:44, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA012219

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012219, complete gene.

LocusTag

OsI_10722

Ensembl Transcript ID

BGIOSGA012219-TA

Ensembl Protein ID

BGIOSGA012219-PA

Length

2253

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8153144..8155396

Sequence Coding Region

8153144..8153204,8153340..8154090,8154781..8154879,8155210..8155396

Genome Context

<gbrowseImage1> name=IndicaChromosome03:8153144..8155396 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:8153144..8155396 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCACAGTGCCCAACTCATGTCGCTCTCCGGTTGCTTGCTCTGCTCTTCCTGCTTCCAGCTGCGTGGTCCGCGACGTTCACGATGACCAACAATTGCGGCTACACGGTGTGGCCTGGGCTGCTGTCGGGTGCCGGCACGGCGCCGCTGTCGACGACAGGGTTCGCGCTGGCGCACGGCGCGTCGGCGACGGTGGACGCGCCGGCGAGCTGGTCGGGGCGCATGTGGGCGCGCACGCTCTGCGCCGAGGACGCGACAGGCAAGTTCACCTGCGCCACGGGGGACTGTGGCTCGGGTGGCATCCAGTGCAACGGCGGTGGCGCGGCGCCGCCCGCCACGCTCGTGGAGTTCACGCTCGACGGCTCCGGCGGCATGGACTTCTTCGACGTGAGCCTCGTCGACGGGTATAACCTGCCCATGATCATCGTGCCGCAGGGCGGGGGCGCCGCAGCGCCGGCCGGAAGTGGCGGCGGCAGCGGCGGCAAGTGCATGGCCACGGGCTGCCTCGTCGACCTAAACGGCGCGTGCCCGGCCGACCTGAGGGTCATGGCGGCGAGCACCGGCACCGGCGCCGCCGCTCCCGGCGGGGGGCCCGTGGCTTGCCGCAGCGCGTGCGAGGCGTTCGGGTCGCCGCAGTACTGCTGCAGCGGCGCGTACGGGAACCCGAACACCTGCCGGCCGTCGACCTACTCTCAGTTCTTCAAGAACGCGTGCCCTCGCGCCTACAGCTACGCGTACGACGACTCCACCTCCACATTCACCTGCACCGCCGGCACCAACTACGCCATCACCTTCTGCCCAAGCACCACCAGGTGTGAGATCATTCAGACGAGCCAGGAGAACTATTCAACCAACGGCCAACCCAGCAGCGCGGCAACGGCTAGGCGGGAGGAATCTGTGCCGCGGCGTGGCGGGAAGTACTCCGGCGGTGAGAACCCGCAGGCGGCCGGCGTGCCGTCCACCAACGACACGATGGTCGTCCTCGGCGCCGAGCAGCTCTCCACCGCCTCCTCCGCCGCCGCCCATGCTGCGCCGCAGCTCACGCTACCACTACTACCACTCGTCGTCGTCGCCGCCCTCGTTGCCGCCATGATCTAG</cdnaseq>

Protein Sequence

<aaseq>MSQCPTHVALRLLALLFLLPAAWSATFTMTNNCGYTVWPGLLSGAGTAPLSTTGFALAHGASATVDAPASWSGRMWARTLCAEDATGKFTCATGDCGSGGIQCNGGGAAPPATLVEFTLDGSGGMDFFDVSLVDGYNLPMIIVPQGGGAAAPAGSGGGSGGKCMATGCLVDLNGACPADLRVMAASTGTGAAAPGGGPVACRSACEAFGSPQYCCSGAYGNPNTCRPSTYSQFFKNACPRAYSYAYDDSTSTFTCTAGTNYAITFCPSTTRCEIIQTSQENYSTNGQPSSAATARREESVPRRGGKYSGGENPQAAGVPSTNDTMVVLGAEQLSTASSAAAHAAPQLTLPLLPLVVVAALVAAMI</aaseq>

Gene Sequence

<dnaseqindica>1..61#197..947#1638..1736#2067..2253#ATGTCACAGTGCCCAACTCATGTCGCTCTCCGGTTGCTTGCTCTGCTCTTCCTGCTTCCAGGTAATGGATCTTTTGGCGTCCTTGCTCTGCTTATGCGCATTGTTTTGTTTTTGCTTGTGTTTTTGGTTGGCATTGGCCGTTGGATTTTGCTTGCGTGCGGCTGCTGAATCGGTGGAATTGTTGCGTGTGTTGCAGCTGCGTGGTCCGCGACGTTCACGATGACCAACAATTGCGGCTACACGGTGTGGCCTGGGCTGCTGTCGGGTGCCGGCACGGCGCCGCTGTCGACGACAGGGTTCGCGCTGGCGCACGGCGCGTCGGCGACGGTGGACGCGCCGGCGAGCTGGTCGGGGCGCATGTGGGCGCGCACGCTCTGCGCCGAGGACGCGACAGGCAAGTTCACCTGCGCCACGGGGGACTGTGGCTCGGGTGGCATCCAGTGCAACGGCGGTGGCGCGGCGCCGCCCGCCACGCTCGTGGAGTTCACGCTCGACGGCTCCGGCGGCATGGACTTCTTCGACGTGAGCCTCGTCGACGGGTATAACCTGCCCATGATCATCGTGCCGCAGGGCGGGGGCGCCGCAGCGCCGGCCGGAAGTGGCGGCGGCAGCGGCGGCAAGTGCATGGCCACGGGCTGCCTCGTCGACCTAAACGGCGCGTGCCCGGCCGACCTGAGGGTCATGGCGGCGAGCACCGGCACCGGCGCCGCCGCTCCCGGCGGGGGGCCCGTGGCTTGCCGCAGCGCGTGCGAGGCGTTCGGGTCGCCGCAGTACTGCTGCAGCGGCGCGTACGGGAACCCGAACACCTGCCGGCCGTCGACCTACTCTCAGTTCTTCAAGAACGCGTGCCCTCGCGCCTACAGCTACGCGTACGACGACTCCACCTCCACATTCACCTGCACCGCCGGCACCAACTACGCCATCACCTTCTGCCCAAGCACCACCAGGTAATCGATTTCTCCACGACTCCCACCCCATGATTCGTACTCGACGGCTCGAAGCTTCATAACTCAGCAACCAACTCCCCTTACAATTAGGCGCGCTTAGGCGCGAAATGTACGGTCGAACTGCCTTAAAAGTCAAGTTTTTAACGTGTCGACAACTAATCAACGTAGAGTGCCCGAAAATTTTCTGATTTGGGAATGAGACAGATCGAAGTCGATTTTTTTTATTGAATTTTGATCAAGTGGATCTTTTTTTAATTGAATTTTTGCAAGATAGTACTCGTTGGGGTTTTGATTGGACATGTCAGGAACACATAGAAATCATCGTTTCTTTTTTCTCTCACCGTGCATACGAATCCTCCAATGGCCAATTGACGGTGGAAATGCTACGGTACAGACTACATAGCTCACTCTACGACGGAAAGCCTACTTTCTGACTCTCACCGTGCATACACAGTCCTCTGCACAATGAGCTTGCCGCAAGCCTGCGTTCTGGTTTAGTCCCAATTTTTTCCTCCAACTTTTAACTTTTTCATTACGTAAAAACTTTTCTACGCACAGAAACTTTTAACTTTTTGGACATATCTTTTCAATTTTAATTAAAGTGTGAACTAAACACACCCTGCGTAACACGGTCAACACTGTGATAAAAAGGTGGAACGTTTATTATTCGTCTCTGTTCCTCTGACAAAGGTGTGAGATCATTCAGACGAGCCAGGAGAACTATTCAACCAACGGCCAACCCAGCAGCGCGGCAACGGCTAGGCGGGAGGAATCTGTGCCGCGGCGTGGGTGCGTCTCCCCCCTCCAAGCACAGGACGACAAAAGCTGAGGATGACACCAAGCCTGCACTGGCTTTCTAGCCGTTTCGCGCGTACGGCCCCATCCTGCCATCACCATATTGATTGATGGCGCTGCCACTGTTGTCCTCTTGCCCGCATCCCATGTTCCCGTGCCCACACGCATTTGCGCCTTGCTACTCAAACCAGATCTGCATTCTGCAACAAAAAAAAATCTGCACCGTTGTTACTACCCGCGTTAGTAGTACACTGTTGACAAACTTCATTTTGGTTCCGTATTCTGACCGTGCTTCGCTTGCGTTCTTTGTTTGTTTTGTTGCAGCGGGAAGTACTCCGGCGGTGAGAACCCGCAGGCGGCCGGCGTGCCGTCCACCAACGACACGATGGTCGTCCTCGGCGCCGAGCAGCTCTCCACCGCCTCCTCCGCCGCCGCCCATGCTGCGCCGCAGCTCACGCTACCACTACTACCACTCGTCGTCGTCGCCGCCCTCGTTGCCGCCATGATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012219