Difference between revisions of "Os09g0382120"

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(Created page with "{{JaponicaGene| GeneName = Os09g0382120| Description = Zinc finger, BED-type predicted domain containing protein| Version = NM_001188885.1 GI:297726900 GeneID:9269550| Len...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0382120|
 
GeneName = Os09g0382120|

Revision as of 20:58, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0382120

Description

Zinc finger, BED-type predicted domain containing protein

Version

NM_001188885.1 GI:297726900 GeneID:9269550

Length

4790 bp

Definition

Oryza sativa Japonica Group Os09g0382120, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13560388..13565177

Sequence Coding Region

13560388..13560434,13561244..13561309,13561514..13561598,13561727..13561897,13562875..13563107
,13563216..13563280,13563518..13564688,13565111..13565177

Expression

GEO Profiles:Os09g0382120

Genome Context

<gbrowseImage1> name=NC_008402:13560388..13565177 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13560388..13565177 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgatcaggagtgtggcggtccaagcggcggcgtcggcaaacaagaggatggagaaatgaatggcacggaaaatgaggttgacgatgccgatgacatggttgaacaagaggaaagctcaggcagcgcgccaagcccattgctcttaggcacacggcccaaaaggctccgatcaaaggtgtgggatgacttcacacccatcttcgtcgatgggaaggttgcgagggctgagtgcatgcattgccaccgagtcttcaacagtggcacaagcaatctgctaaagcatcaggccaaatgcagcccccgggcacagaagaggcccatgcaacaagagcttccagtatcgctgtcagtcgagaataggtcccctaaggaacttgatgcagttgagcaggacattcctacagacaaaaatacaaagaacctggaggttgaacaggctgaaactaataagctcgtcagaacattggcaatgtacggagatattccgttgagggtgagcaaccatggtgaattcagtcggtttgttgcttccttaaaccctatggtcgaaattccacctgcagataacttgtacttgtacttcacgggattatttgaagaagaaaaggccaagcttaagaagcggttagcatctttaaatagtcgggtgtccctgagtgtttatgtttggcactatgacacactcttgccatttttgtgcttgagtgttcattacatcgatgatcaatggcagaaggacaaaaagatcattgcattccaggctgtcgattcttcttgccacgcaaaagaattgagtatggtcatattaacagctattagagattggggtctctttggcaaggttttcagcattgcattagatgatgcattcattgacgattcagtggcttcagatgtgaaggatatccttcaaaaatggaactcactgcatgcagatgaaaacttatctggaaaccagagcttgtttgtggtacgctacgcaactcatctacttgatcagattattcaggtagggctcgatgagctcgacaagatcatggagaaatcaagaaagttttctaaacttaacaaattcatggagaggtcaagaaagttttctaagtatccaaagggtgacgctcctttagcattacagtatccaaattgtagatatgcaccatcatcagaagactggggtaaagcagataaaatttgtgcgatcttggatgattttcatcgacaaaaggatgaacttgatatggaagattatattgaagaagtaaatgacatgttgcttaggctcttcagggaatattctgagcggaagcgaccgatgactgaatttgatcagtatttggaagatccatgtctctcaaatgatggaaccagtgttctcaaatggtggaaggaacatagtatgatatatcctacaatcgctcggatagcacgtgacatattggcaataccttaccgtactgattgtaaggtagcaacaaggaccacaagagttgcaattgctaagtcagatggtaaccactatgttgaagagcgcattcttgtgcagcatgatgcagtacgcaaggaacagagactgaactacagcaaaagcacacaagttcagaactggagttctagcgccagcttgttgggccgaaccaaaatggttaaatgggctctaggttttcaggcttgggctccctggaaaagtggggcccagacaaagagagaggaaaaatcctcgcttcccaagagggtagcggcggcggcggaggtggcggcaaggaatccagcgttgcgtccggggatcggcatggaacaagattgtgatgatgctgcaaaccaagtcggcgcaggagaggaaaggatactgaacgttgtgctcctcaagacatgtgtgaagcacaattttattggtaagtaa</cdnaseq>

Protein Sequence

<aaseq>MDDQECGGPSGGVGKQEDGEMNGTENEVDDADDMVEQEESSGSA PSPLLLGTRPKRLRSKVWDDFTPIFVDGKVARAECMHCHRVFNSGTSNLLKHQAKCSP RAQKRPMQQELPVSLSVENRSPKELDAVEQDIPTDKNTKNLEVEQAETNKLVRTLAMY GDIPLRVSNHGEFSRFVASLNPMVEIPPADNLYLYFTGLFEEEKAKLKKRLASLNSRV SLSVYVWHYDTLLPFLCLSVHYIDDQWQKDKKIIAFQAVDSSCHAKELSMVILTAIRD WGLFGKVFSIALDDAFIDDSVASDVKDILQKWNSLHADENLSGNQSLFVVRYATHLLD QIIQVGLDELDKIMEKSRKFSKLNKFMERSRKFSKYPKGDAPLALQYPNCRYAPSSED WGKADKICAILDDFHRQKDELDMEDYIEEVNDMLLRLFREYSERKRPMTEFDQYLEDP CLSNDGTSVLKWWKEHSMIYPTIARIARDILAIPYRTDCKVATRTTRVAIAKSDGNHY VEERILVQHDAVRKEQRLNYSKSTQVQNWSSSASLLGRTKMVKWALGFQAWAPWKSGA QTKREEKSSLPKRVAAAAEVAARNPALRPGIGMEQDCDDAANQVGAGEERILNVVLLK TCVKHNFIGK</aaseq>

Gene Sequence

<dnaseqindica>4744..4790#3869..3934#3580..3664#3281..3451#2071..2303#1898..1962#490..1660#1..67#atggatgatcaggagtgtggcggtccaagcggcggcgtcggcaaacaagaggatggagaaatgaatggtgcgattctctctactatctcgtatggattgaaacgaatctattttcatgatgcgttcttgcaagtggaagtcttctaggttcacttcgattgcacgagtaataggcagcttcaaagtctagtacctattgcgctacatttatttcctcgaaatgctacttgtctactttgttcacaaatctggtactctataagctctacattgttgaatgataaactctcttgcatgtaaagaagaaatgttgcagtgcagctttaatcttgtggtgcatttggcaattacaatgttttcacagcaatgcgctaagcctgttcagtccatccccttttaaaaatattgttcacttaaattagggcaattaatttttagacatgttttactcaattgactgcacttttctaagtctttcctgatgtctaggcacggaaaatgaggttgacgatgccgatgacatggttgaacaagaggaaagctcaggcagcgcgccaagcccattgctcttaggcacacggcccaaaaggctccgatcaaaggtgtgggatgacttcacacccatcttcgtcgatgggaaggttgcgagggctgagtgcatgcattgccaccgagtcttcaacagtggcacaagcaatctgctaaagcatcaggccaaatgcagcccccgggcacagaagaggcccatgcaacaagagcttccagtatcgctgtcagtcgagaataggtcccctaaggaacttgatgcagttgagcaggacattcctacagacaaaaatacaaagaacctggaggttgaacaggctgaaactaataagctcgtcagaacattggcaatgtacggagatattccgttgagggtgagcaaccatggtgaattcagtcggtttgttgcttccttaaaccctatggtcgaaattccacctgcagataacttgtacttgtacttcacgggattatttgaagaagaaaaggccaagcttaagaagcggttagcatctttaaatagtcgggtgtccctgagtgtttatgtttggcactatgacacactcttgccatttttgtgcttgagtgttcattacatcgatgatcaatggcagaaggacaaaaagatcattgcattccaggctgtcgattcttcttgccacgcaaaagaattgagtatggtcatattaacagctattagagattggggtctctttggcaaggttttcagcattgcattagatgatgcattcattgacgattcagtggcttcagatgtgaaggatatccttcaaaaatggaactcactgcatgcagatgaaaacttatctggaaaccagagcttgtttgtggtacgctacgcaactcatctacttgatcagattattcaggtagggctcgatgagctcgacaagatcatggagaaatcaagaaagttttctaaacttaacaaattcatggagaggtcaagaaagttttctaagtatccaaagggtgacgctcctttagcattacagtatccaaattgtagatatgcaccatcatcagaagactggggtaaagcagataaaatttgtgcgatcttggatgattttcatcgacaaaaggatgaactgtacaaaggttgcagtccactctagctctttgacaagatctgggatgtcaagaaggatttgcaccgtgaaccagtttactatagtgacgaagaaagttcgtatgtgcgggaaaagatgcaaaggaagttcaaggaacaatggaaattcaattgcttacatatttgtatgcctatgatcatggatcctaaataccgtctggaaatcatcaagtcacgtattatgtataattttaacagtgatatggaagattatattgaagaagtaaatgacatgttgcttaggctcttcagggaatattctggtcagactgaagaccctaactgcacttccagttttataactagtggctggaattatttgtataaagatgacaggttgttggatcattatcattattctgaatttccagagcggaagcgaccgatgactgaatttgatcagtatttggaagatccatgtctctcaaatgatggaaccagtgttctcaaatggtggaaggaacatagtatgatatatcctacaatcgctcggatagcacgtgacatattggcaataccttaccgtactgattgtaaggtagcaacaaggaccacaagagttgcaattgctaagtcagatggtaaccactatgttgaagagcgcgtatgtactcaggattggctcagatcaggcggtgagttttgtgcccttgctgttctcttttttttttgaggggtagtgcccttgctgttctcactgctatccaattgcatgattgtactaactgtggtatacatgtgttgtaggttatgcaagttagttacctcatatcattcaatgatactttggggcgaatagttcagcattgctaatgttttatgtaagttgttttccttatgttctcactgtaatatgtgctactggcaatgctcataagctacatttctgatgcaggtctgcaggattcgacaatgcgtgtactcaggttcagaaatgttgaggataatatgcttagttcatttggcaactatggttaacagtatcttcagttactgatgatagatcatggatgtgtaatggggcttgtgtatgtatgtgtggtcggtgacttgtcggttggtctactggtttcagtatttatcctttctaaacctatcgatccggtgatacttgatcattgttcttatcttgatattatattaattatatatccctgagttatattcctgtaattttcagtcttacggtttccataagctagagtatactttattttgcttttcatgcttgtatctggtttgttcggtcgaccaaaaaaatattcaggctttctatgaagaatgatgcacgacatgatcatgcatagatcacagtagtagtttttaatttatcatcaaccatttttttcctggaagatctgaaaaaccaggcggatatactctgataagtccatgggacaaaactaaaatgttcagaacatcatagagaagtagagagcacacctttttttttggttgcagtgctgttctcagaactcagaactcacctccgcttaataaagctaaacacagatctagatttgtacacaatctgcagctttttctttgttagttcaacccaatcgatctcttacaacacagattcttgtgcagcatgatgcagtacgcaaggaacagagactgaactacagcaaaagcacacaagttcagaactggagttctagcgccagcttgttgggccgaaccaaaatggttaaatgggctctaggttttcaggcttgggctccctggaaaagtggggcccagacaaaggtaggtgacagattttcatttttaccgcgaacgcgaggtgaggtggcgcggggaatcggcgcgaaaggctccttcccggtttctcctttcccgccatatttctctctcgtttgcttccgctttaatagagagaggaaaaatcctcgcttcccaagagggtagcggcggcggcggaggtggcggcaaggaatccagcgttgcgtccggggatcggtatgcgtcttctcgattcttgtttattcactattctttctcgattcctggttttcttcttctttttttccccatttcttggggttgtggtgatgcactctgcttcttcctagtggatttcggtttttgtcgattcgttatatcgtgcatgctggttgtgattggaaacagctgaggaatggattgcttctgtttggtgtctaggcatggaacaagattgtgatgatgctgcaaaccaagtcggcgcaggagaggaaaggatactgaacggtactgttttctcttactctcactcagaactcagaagatgtcatctatttggatgccatcgccagctgcatagtttgttattgattttctgttgctctatttattcatctagctgttaaatgtctggtttgattaactttgttcacaaatctgacgctggacgaattctactttgttgaaatgtctactcagttagtcagtttgcaaaaacaacgacgacaacgaatgctattccaattagtattttgtttttttttcgcgaatgccaattagtattttgttgcattaggctttaatcgatttataaaactagtaaggaagcccgcgcagatgcgcgggcagtttatttattgtatataaaaagaatactaaaagaaatcctatctcactatattcactataataaatagatcatagattctgatgtactaaatgataaggatgcgtatcatatccaaacaaaataatcactttgtctcgattatatgtaaattcgcctatcaccactacttattgtcattgtcttgaaatatgattgtctttttaatagatataattgcagttatacctaaaaataaacccaacacatcattaatgtcataaaaaaatctccacatcatactcaagtgcccatgtctcacatgtgtccaaatctgtatataaatattaaaagtaccgcttctaccaattaataggataaccccattaaacttatataagaatgcccctctaacgactgggtgaagccgactatagccgctaaggatttttctctaatgccttaattcatgggtctcatattgatatagttgtgctcctcaagacatgtgtgaagcacaattttattggtaagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0382120, RefSeq:Os09g0382120