Difference between revisions of "BGIOSGA013923"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA013923|
Description = Pentatricopeptide repeat protein ppr1106-17|
Definition = Oryza sativa Indica Group BGIOSGA013923, complete gene.|
ta...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA013923| | GeneName = BGIOSGA013923| | ||
Revision as of 15:53, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA013923 |
|---|---|
| Description |
Pentatricopeptide repeat protein ppr1106-17 |
| Definition |
Oryza sativa Indica Group BGIOSGA013923, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA013923-TA |
| Ensembl Protein ID |
BGIOSGA013923-PA |
| Length |
3605 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:39857098..39860702 |
| Sequence Coding Region |
39857098..39857197,39857297..39857398,39857492..39857625,39857706..39857975,39858156..39858334 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome03:39857098..39860702 source=RiceIndica03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome03:39857098..39860702 source=RiceIndica03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGGAAAGATGCGGAAATCTAAGAGGACGGCTGATCATAATCTCACAAGAAGCTCCAAGAACGAAGGAGAGATAAGCAGTACTAAGTCATTGATCTCAGGCGACTTAAATTCGGGCTCTAATCAAGATGTCTGGGCTATTCTCAGTGTTGAAGTTGCATCAAATTTGTCTAAAAGCGTTGTCTCACTCACCTTGTCTGATGGAAACACACTGATATATGCATGCTCGGGCATAGCTATCGAGTGCCAGGAGGGGTCTGGTACAATTTTCCTGACCTCGGCTAGTTTGGTAACAGCTTTCTATGATACTGAAGAAGTCTATGATAACTTAAAGGTGATTGAAGTGCGCCATGAAGGCAATGAAGTGCTCAAGGGTTATTTGGCAAAATATGATTTAGACAAGAACTTTGCTGTTGTCTACACCATGGAATCTCTTGATGTTCATATTGTACTTACCGAAAATTCGAGGGATAGGTATATCAACAAAAAGTTAGTAGCTGTAGGGCGTGACAAACATGGCGTATTAATGGCCAAAAGTGTGATGGTGGCTGGTTGTCGTGATTCAAACAGATCTGAAGATAGCAAAGAAATTAGGTTGATCTCTGAGGACTGGGAAGGTGGACCGCTTTTTGATTTTGATGGGAAATTTGTTGGCATGAATCGTTTTTCGGTTATGGATAGAACATCTGTCCTGTCATGGGTCTCAATTCTCATTATTTTGAAGCATTATTTGCCATCCCTGCAAAACAGGATTCTTAAACGGTTACAAAATGTCAAAAGAGTCAGGAAAAAGGAGGTCTTTTGCATGCACGGTTTCTTTATTGAATGGAAGGGATGTACAACTATTCTGACATCTGCGAGCTTGGTTAGAGAGTCTGATGATGGAAACAAGATTGATGAAAACTTGAGGATTGAAGTGTTGCTTCCAAACAAACAACTTAGAGAAGGAACACTACAGCATTATAGTTTACACTACAATGTTGCTCTAGTGAGTGTTAAGGACAAGGATTTCCATGCTCGTCCAGCAAATATTCAGCTTGATCATAATCATGGACCTGGAGTAGCAGCCGTAGGGCGTTGCTTCGAATCAGGCAAATTAATGGCTGCACGGACGGATGTTGTTGATTGGTCGGGCACACTTGATTGTGAGATGTTCCTTATACGTTCCTCATGCAAAATCACTAAGGCAGGGATTGGAGGACCTCTTGTTGACTTAGAAGGGAAAGTTATTGGCATGAACTTCTATGATAAGAAGATAGGAACCCCTTGCCTGCCATGGAATGTGATTCTTATGGTTCTGGCATGTTTTGAGAAAGAAAGTAGCGGTGGTGAAGTTGGCAGTGGTAGTGATCCATGTGGTGCGCCTGGCTGGAAAATCCCTCGAGATGAGAGTGTCAGGCTAAACAGGTGGCCTGTGCCCCTGACATATTGGCGTCCTCATGACGATGTGGATGAACAAGAACCCCCAGAAGGCTGTGAGCACATCTACACATACATAAATGGTGAAAGATATTGTTACAGAATTTCCTGGTATTTCGGGATTCCTAATTGGATGTGGAAAACGATCAGGAACCCTAATTCTTGCCGGCCCATGGTCATGGAGCCTGAATCTGAAACGCATAAGATGTGGATGCGTTATATGTGGAGTTAA</cdnaseq> |
| Protein Sequence |
<aaseq>MGKMRKSKRTADHNLTRSSKNEGEISSTKSLISGDLNSGSNQDVWAILSVEVASNLSKSVVSLTLSDGNTLIYACSGIAIECQEGSGTIFLTSASLVTAFYDTEEVYDNLKVIEVRHEGNEVLKGYLAKYDLDKNFAVVYTMESLDVHIVLTENSRDRYINKKLVAVGRDKHGVLMAKSVMVAGCRDSNRSEDSKEIRLISEDWEGGPLFDFDGKFVGMNRFSVMDRTSVLSWVSILIILKHYLPSLQNRILKRLQNVKRVRKKEVFCMHGFFIEWKGCTTILTSASLVRESDDGNKIDENLRIEVLLPNKQLREGTLQHYSLHYNVALVSVKDKDFHARPANIQLDHNHGPGVAAVGRCFESGKLMAARTDVVDWSGTLDCEMFLIRSSCKITKAGIGGPLVDLEGKVIGMNFYDKKIGTPCLPWNVILMVLACFEKESSGGEVGSGSDPCGAPGWKIPRDESVRLNRWPVPLTYWRPHDDVDEQEPPEGCEHIYTYINGERYCYRISWYFGIPNWMWKTIRNPNSCRPMVMEPESETHKMWMRYMWS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..100#200..301#395..528#609..878#1059..1237#2180..2303#2388..2663#2754..2887#2967..3053#3159..3272#3476..3605#ATGGGAAAGATGCGGAAATCTAAGAGGACGGCTGATCATAATCTCACAAGAAGCTCCAAGAACGAAGGAGAGATAAGCAGTACTAAGTCATTGATCTCAGGTCCGCTGGTTTTCCTATTTTCTGCATATCTTCTTGTATCGTATAACCCTATTTGAGTACTAACACTTGTGTTGTATGTATATATGGCGTTTTAACCAGGCGACTTAAATTCGGGCTCTAATCAAGATGTCTGGGCTATTCTCAGTGTTGAAGTTGCATCAAATTTGTCTAAAAGCGTTGTCTCACTCACCTTGTCTGATGGTAATTATATGTTTTGCTATTGTTATACATTGTCAAATTTATATTTGAACAATGTCCCCTGTTATAAATGGTTTAACCTGCGATCTTGTGTAGGAAACACACTGATATATGCATGCTCGGGCATAGCTATCGAGTGCCAGGAGGGGTCTGGTACAATTTTCCTGACCTCGGCTAGTTTGGTAACAGCTTTCTATGATACTGAAGAAGTCTATGATAACTTAAAGGTGGTGCTTGTTGTCATCCTTTACTAATTTTTGCTTGTTTGCTTAGGATATTTTGTGACTCCTTTCTTGCTTTGCCATTATAGATTGAAGTGCGCCATGAAGGCAATGAAGTGCTCAAGGGTTATTTGGCAAAATATGATTTAGACAAGAACTTTGCTGTTGTCTACACCATGGAATCTCTTGATGTTCATATTGTACTTACCGAAAATTCGAGGGATAGGTATATCAACAAAAAGTTAGTAGCTGTAGGGCGTGACAAACATGGCGTATTAATGGCCAAAAGTGTGATGGTGGCTGGTTGTCGTGATTCAAACAGATCTGAAGATAGCAAAGAAATTAGGTTGATCTCTGAGGTAAACTCGCATAATGATACAAGCACATCTTAACCTTTTTCTGTTACTATATCTATATGCACTAAACTTTATTATCAGGCCTGTAAAAGTGGAATTTTTTTTCTATGTGAATGTTGTTCAATATCACTTCCTTTTGTTCAAATGGAGTCCTTGTTGACCATCACTTTATATTTGTGTTAGGACTGGGAAGGTGGACCGCTTTTTGATTTTGATGGGAAATTTGTTGGCATGAATCGTTTTTCGGTTATGGATAGAACATCTGTCCTGTCATGGGTCTCAATTCTCATTATTTTGAAGCATTATTTGCCATCCCTGCAAAACAGGATTCTTAAACGGTTACAAAATGTCAAAAGAGTCAGGTATGTCTTTGCTTATGTTTGATCCTCATTGGTTCACCCACTTTATTACCCTGCATGTGTTCATACGGTAGGCTGGTTTGCATGTCAAACAACATATGAGCGAATTTGTTCTTCAATGATCTGGATTGTTAGCTGCTGTTCCTTTTTATAGGTCCTCAAAACTTCAGATCCTCTTTTTTATCTTTTTCCTTTTTCTCCTTGCCTATGATGCTACCCTGTAGGTGTTGGCATTGTGTTATGCACTGGTATGACCCGTTTTACCTTTGGGTTGGTGTTCTTCTGCAGGGATGGAGAGAGACCCACAGGTGAGCTACCTGACTATCATCAAGAAGGTGAGCACAGTGCCATAGTGCCATACCTTGGCACCACCAAACATGCATGCAAATTTTGGTTGTATGTAATGGTATCTATTTTTAATATTAGCTTTTACATTTGAACTTTCTAATTTTACATGAACTTATCGCATTTAGTTAGTGTATCTCAGCGCTAATCACTTGGCCTTGTGCAGCACCAGTACATAGATGTGGTCTCAACACAGAACAGTTTGGGTATCTAAACTCCATGGGTTATCCCAAGCCGCCAATAAATGTGTTAGACGGTGAGTCATTGTTTGTAAATTTGCTAACTTATCGCGCATCACATCTTTCTACAGTTTACTACTACGAATTAATGACTATTCTACCATGTATCTTCTACCAGATGGTATGATTTTGGCTAATTCTTTTGAAGAGACTTTTGGAGATTTATGTGGTGAAGATCTTTGGAGTGAAATCAATAAAAAGGTTCCTTGTGACATACATCAAAATGTTGTTGCACTTGCTTCATTCAAAGGTGATTTTACACTAATTAATGTGCTATATTGATTTTCCCATTTCATATTTGTATTCGGTTGTCACTAATAAATAATAATCAAATGTATGCATGATAATGCATGGTATGCAGGAAAAAGGAGGTCTTTTGCATGCACGGTTTCTTTATTGAATGGAAGGGATGTACAACTATTCTGACATCTGCGAGCTTGGTTAGAGAGTCTGATGATGGAAACAAGATTGATGAAAACTTGAGGGTGGGTGCTAATCATGTAGCTCCTCCTAATTATTTTGCTCTTTATTTTTAAGTCTCACTCACTTATTCATCAATTTATTTGCAGATTGAAGTGTTGCTTCCAAACAAACAACTTAGAGAAGGAACACTACAGCATTATAGTTTACACTACAATGTTGCTCTAGTGAGTGTTAAGGACAAGGATTTCCATGCTCGTCCAGCAAATATTCAGCTTGATCATAATCATGGACCTGGAGTAGCAGCCGTAGGGCGTTGCTTCGAATCAGGCAAATTAATGGCTGCACGGACGGATGTTGTTGATTGGTCGGGCACACTTGATTGTGAGATGTTCCTTATACGTTCCTCATGCAAAATCACTAAGGTACATACCGCTAGATAGCTGTTGATTTTAAATCTCTAGCATGTTTTTACATGCACGGTGAAAATTTATAACCATCGCGTTGGTTTGTAGGCAGGGATTGGAGGACCTCTTGTTGACTTAGAAGGGAAAGTTATTGGCATGAACTTCTATGATAAGAAGATAGGAACCCCTTGCCTGCCATGGAATGTGATTCTTATGGTTCTGGCATGTTTTGAGAAAGAAAGGTATTCGTAGATTTCTTTTCTTTTTTTTTTGGTTATTTAAGTGCTTGCAATAAAATCTATTCGATTGTGTGTTTGACAGTAGCGGTGGTGAAGTTGGCAGTGGTAGTGATCCATGTGGTGCGCCTGGCTGGAAAATCCCTCGAGATGAGAGTGTCAGGCTAAACAGGTTGGTTTTCTGATAAATCTCAACAGTTAACACTTAACACTACCAATTTACAGGGTCTCATATTATTTTCTGATCGCATTGCATATATTGGAACTAAACTAATAGGTGGCCTGTGCCCCTGACATATTGGCGTCCTCATGACGATGTGGATGAACAAGAACCCCCAGAAGGCTGTGAGCACATCTACACATACATAAATGGTGAAAGATATTGTTACAGGTAGAATCTGCTTCTTCTACTCTGTCTGTTGGATCTACTACGACGCCCGTTTGCTAGCGGAGCTTGCTGCCGTGATTCAAGATTTTGATGAGCTTGAACTGTTTGATGTACATATGCAGATTTAGACGCCAGATGTAATATATATTACTAAAGAAAGTTTATTCGAATCAAGAGATCTTTGTGTTGTGTGTTTGCTTCTGCAGAATTTCCTGGTATTTCGGGATTCCTAATTGGATGTGGAAAACGATCAGGAACCCTAATTCTTGCCGGCCCATGGTCATGGAGCCTGAATCTGAAACGCATAAGATGTGGATGCGTTATATGTGGAGTTAA</dnaseqindica> |
| External Link(s) |
