Difference between revisions of "BGIOSGA005405"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA005405|
Description = cDNA clone:J013094E21, full insert sequence|
Definition = Oryza sativa Indica Group BGIOSGA005405, complete gene.|
ta...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA005405| | GeneName = BGIOSGA005405| | ||
Revision as of 18:35, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA005405 |
|---|---|
| Description |
cDNA clone:J013094E21, full insert sequence |
| Definition |
Oryza sativa Indica Group BGIOSGA005405, complete gene. |
| LocusTag |
OJ1548_F12.25 |
| Ensembl Transcript ID |
BGIOSGA005405-TA |
| Ensembl Protein ID |
BGIOSGA005405-PA |
| Length |
5606 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:36446507..36452112 |
| Sequence Coding Region |
36451704..36452112,36451373..36451612,36451114..36451280,36450842..36451022,36450702..36450754 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome02:36446507..36452112 source=RiceIndica02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome02:36446507..36452112 source=RiceIndica02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGGCGCTCGTGCGGCCCGCCGTGCTGCCCGTCTGCGCCATGACGGGCGGCGGCGGTAACGACAAGCGGTCGCCGCCGCAGCAGCGGTCGTGGTGGGGCGGGAACAAGCAGAGATTGCCGCACCAGCCGCGGCGGCAGCCGGGCGGGAATGGTGGCCGAGGAGGAGGAGGAGGGGCGCTGGACCAGGTGCTCGGAGTGCTCCGCCGCGACGGCGAGTTCCTCCAGGCGGCAGCCGGCGCCCCCCTCCGCGACATCTTCTGGCTCCGCTTCCTCGAGAAGAAGAAGCAGCAGCGGCGGCGGAAGCAACCAAAACCTAAACCCAAACCTCCGGAGCAGCAGCAGCAGCAAGAGGAAGCGGCGGCGGCTAGCCAAGCCCCATCCTTCCCACCTCCCTCCTACCAGCCAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGCAGCAGCAGCAGAAGAAGCAGCAGCAACAAGAGCACCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCAGATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCTACAGCGGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAAAGTTGGACAGTCCCTCTCAACAAGGCCTGATATCACAGGCTCGGAGATTTCTGAGGCACTCGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGAGAAAAGATGCAATGAAGATTATTGAGGGAGAATTTGAGCTCCCTGTATCACACATTTTCAGTTACATTTCTGATGAGCCTGTTGCTGCAGCTTCCTTTGGACAGGTTTATCAGGGACGTACAGTTGATGGTGCTCTTGTGGCCATAAAGGTTCAACGGCCTAACCTTCTTCCTTCAGTATTGAGGGACATTTATATTCTACGGCTTGGGCTTTCTTTTGTGAGGAAGGTAGCAAAGAGGAAAAGCAACATTGCCCTCTATGCTGATGAGTTGGGTAAAGGTTTTGTTGGCGAGTTGGACTACAATATTGAAGCTGCTAATGCTACCAAATTCCTGGAATATCATTCCAGATATTCATTTATGCTGGTTCCAAAGGTTCTCAAGCAACTTACGAGGAGAAGAGTTTTGACAATGGAGTGGGTATCTGGTGAAAATCCCACAGATTTGCTTTCCTTATCTAAAGGAATTTCATCAGAAATTGCTGAATCGTCAGAGAAGCAGAAGATCGAAGCAACAGCCCGTCTTCTTGACCTGGTCAACAAAGGTGTCGAAGCATCATTAGTGCAGCTCCTCGAGACTGGTTTGTTGCATGCTGATCCTCATCCTGGGAATTTGCGTTATACACCTGAAGGTCGTGTCGGGTTTCTTGATTTTGGTTTGCTTTGTATGATGGAGAAGAAACATCAGCATGCTATGCTTGCAAGTATCGTTCACATAGTAAATGGAGATTGGGCTTCTCTTGTTTATGATTTGACTGCAATGGATGTTGTTCCACCAAGAACTAATCTACGCCGAGTGACAATGGACTTGGAGGATGCGTTGGGTGAGGTGACCTTTGAAGATGGAATTCCAGATATCAAGTTTAGCAGGGTGCTTGGAAAAATATGGTCTGTGGCATTTAAATACCACTTCCGTATGCCGCCGTACTACACGCTCGTCCTGAGGTCACTTGCCTCTTTGGAAGGGCTGGCCATTGCAGCAGATGGAACTTTTAAAACATTTCAAGCAGCATATCCATATGTTGTGCGGAAGCTTCTATCGGATAATTCAGTTGCAACAAGGAGACTCTTGCATCAGGCTATTTTCAACAAAAGGAAAGAGTTTCAGTGGAACAAGATTACAGTATTTCTAAAATTAGCATCAGCAAGGGGTAACTTCAGGTATAATACTGGCGTTTTGCCTGAGAGGAAGGGTTTGGATGTTGCAAAACTTGTAGAGATCAGTGATGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAGCCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAGGCTGAAGGTGATATTCTCCAAGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGTCTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGA</cdnaseq> |
| Protein Sequence |
<aaseq>MAALVRPAVLPVCAMTGGGGNDKRSPPQQRSWWGGNKQRLPHQPRRQPGGNGGRGGGGGALDQVLGVLRRDGEFLQAAAGAPLRDIFWLRFLEKKKQQRRRKQPKPKPKPPEQQQQQEEAAAASQAPSFPPPSYQPGLSCLDLMTADFEALKLYIGYSKHAIEQQFLKGKRQPQHQQTPKPKLQQQQQQQQKKQQQQEHQNQTLQPPAFPPPSYPPGLSCMELMMADIEALKLYINYYVAILTTPLPQHYDPEILSRYFTSRPHILAFRTIQIIFAFVSAAVKMQISKRTNLITDATYSGNSTGSKGFNASQYMVGQLLKETFLDLGPTFVKVGQSLSTRPDITGSEISEALAELHEKVPPFPRKDAMKIIEGEFELPVSHIFSYISDEPVAAASFGQVYQGRTVDGALVAIKVQRPNLLPSVLRDIYILRLGLSFVRKVAKRKSNIALYADELGKGFVGELDYNIEAANATKFLEYHSRYSFMLVPKVLKQLTRRRVLTMEWVSGENPTDLLSLSKGISSEIAESSEKQKIEATARLLDLVNKGVEASLVQLLETGLLHADPHPGNLRYTPEGRVGFLDFGLLCMMEKKHQHAMLASIVHIVNGDWASLVYDLTAMDVVPPRTNLRRVTMDLEDALGEVTFEDGIPDIKFSRVLGKIWSVAFKYHFRMPPYYTLVLRSLASLEGLAIAADGTFKTFQAAYPYVVRKLLSDNSVATRRLLHQAIFNKRKEFQWNKITVFLKLASARGNFRYNTGVLPERKGLDVAKLVEISDASSSLHLNRATPERALHTANLCLRLLLSKESIVIRRLVMTANAKSLARDLISKDASIYRVLLSRVLADVIFQWMVKATGFKRAGQLEPHPRVTAGKNDEDLGLSKEAPALVTFQTAVRDRRLKVIFSKFVRDIREDPILMVRVSWNMFAISVVSAAIGVHRFIVVLSEEFLSTLPPPVPPPRLVQIQSI</aaseq> |
| Gene Sequence |
<dnaseqindica>1..409#501..740#833..999#1091..1271#1359..1411#1551..1694#1846..1950#2421..2546#2635..2832#3203..3309#3468..3630#3842..3907#4001..4094#4235..4347#4622..4692#4834..5035#5160..5606#ATGGCGGCGCTCGTGCGGCCCGCCGTGCTGCCCGTCTGCGCCATGACGGGCGGCGGCGGTAACGACAAGCGGTCGCCGCCGCAGCAGCGGTCGTGGTGGGGCGGGAACAAGCAGAGATTGCCGCACCAGCCGCGGCGGCAGCCGGGCGGGAATGGTGGCCGAGGAGGAGGAGGAGGGGCGCTGGACCAGGTGCTCGGAGTGCTCCGCCGCGACGGCGAGTTCCTCCAGGCGGCAGCCGGCGCCCCCCTCCGCGACATCTTCTGGCTCCGCTTCCTCGAGAAGAAGAAGCAGCAGCGGCGGCGGAAGCAACCAAAACCTAAACCCAAACCTCCGGAGCAGCAGCAGCAGCAAGAGGAAGCGGCGGCGGCTAGCCAAGCCCCATCCTTCCCACCTCCCTCCTACCAGCCAGGTTTGTCGCCGCGCGGCAGAGAAGCATCTCGATTGGGCTCCGTTGCGCACGCATTGTTCCTGTTGCTGATGGGGATTCTCCCAATTGGTAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGCAGCAGCAGCAGAAGAAGCAGCAGCAACAAGAGCACCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGTTGCTTACACCAAGCAGTGCCCAATTAGCTGTTGCTTAATCATTTAAGTTTCATCGATTGCATTATTAACTTGTTTTATGATTTTTGCTAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCAGGTAAAAGCTGTAATTACTGTTCATCTTTGCTCTTACTAAGCTTCAACTGATAAATCTAATAGTTCAGTGTGCCATGCTTCTGTATCTGTAGATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCTACAGCGGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAAAGGTCAGGTTTTCAGGTTCGATAGCTTTAAGCCATGGTAGTGGCCACTCGGTTCGGATTAATGTTGACTTGCTTGTCTTCTGTGTGCAGTTGGACAGTCCCTCTCAACAAGGCCTGATATCACAGGCTCGGAGATTTCTGAGGTTAGGTAAAATTACTGCAGGATACAATAACATTTCTGCATTTCTTTAATTGCTTCATCATCTTCAGAAGTGTTTTGTTGATCATTAAACAATCTCCATAGTCTTTCTCAAAATTAACTGGCGCACACCCCAATCATAGGCACTCGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGAGAAAAGATGCAATGAAGATTATTGAGGGAGAATTTGAGCTCCCTGTATCACACATTTTCAGTTACATTTCTGATGAGCCTGTTGCTGCAGCTTCCTTTGGACAGGTAATCATATCTTGCAAAACTTTTCCCGTTCTTTTTTAAATATTAGAGACAGGAGCTTTGTAGTTTCTGATTAAGCCTTATTATGTTTTTCTGTACTATCTCTTTCAATTTTTCTGTTATGCTCAGTGTACTCTTGTTTGTTGTACTTTAGGTTTATCAGGGACGTACAGTTGATGGTGCTCTTGTGGCCATAAAGGTTCAACGGCCTAACCTTCTTCCTTCAGTATTGAGGGACATTTATATTCTACGGCTTGGGGTACGTATGCAACTTTATCTCCATTAAATATATAAGCTCATCTGTTTTTGAGTGTTTTTAATTCTGCCAAGTGCTAATGCCCACATCTTGTTCATAGAAGATATATACACCATAGGTTCTTCGCCTACTGTTTGACAAAAAAGAAAGTTCATCTTCTGATCCTCAGCATGAGCATAATACCTGATGCCTTCTATTTTGTTGTCCCTAAACAAGCTTTACCGTTTCCCTGATTTTGTGTTTAATTAAGAGTGTTAATGTGACTATGATAACCTGTGCTGACACAAGAAACATTGTACAGTACTTTCTTTCAATACAGATGGACCTTGTCTCATTTAAGTTTATCTGTATTTAGATTAAATGTTCTTGCACTTCATTTTATTTCTTTATTTTGCTTACAAAATTATAGCATTGCAGCATTTTTCCACTATAGTCCTAGCAACTTGATGTCTTTTCTACCATATATGTTTCAGCTTTCTTTTGTGAGGAAGGTAGCAAAGAGGAAAAGCAACATTGCCCTCTATGCTGATGAGTTGGGTAAAGGTTTTGTTGGCGAGTTGGACTACAATATTGAAGCTGCTAATGCTACCAAATTCCTGGTGCTTTGGTCTTGTCTCCTACCTATACTTTACTAACATATGCCTATTCCTGTTTTGGTGTTTTATCTCATAATTTGTACTTCTGTAGGAATATCATTCCAGATATTCATTTATGCTGGTTCCAAAGGTTCTCAAGCAACTTACGAGGAGAAGAGTTTTGACAATGGAGTGGGTATCTGGTGAAAATCCCACAGATTTGCTTTCCTTATCTAAAGGAATTTCATCAGAAATTGCTGAATCGTCAGAGAAGCAGAAGATCGAAGCAACAGCCCGTCTTCTTGACCTGGTATTTATGTTCGTCACAAGTTATTTCTAAATTATCTGCTTCATTTGAAAAAAGATGAGCACCATAAATAAATTAATCCACAACAATCAGTGCTCCAGGGTAGCAAATATTTGGAATTGAAGTTGTGCTCAGTGAATAGGGCTTTTTTGTCAGTTAGAAACTGCAGTTTACATGGTTCTTTGCAATATTGTGTTTGTTTCAGAAACACGCAGCTTAATTTTATAAATATCTATCACTTCAATATTGATGTTCTTTTCTCTCTGCTGTGGTAGAAATATAAACATTATAACAACAATTACTACATTTCAATAAACATTTTTCCCCTCTGGACAAAATGTTTTAACATCTTGTTAATTACTATGATGATAAGGTCAACAAAGGTGTCGAAGCATCATTAGTGCAGCTCCTCGAGACTGGTTTGTTGCATGCTGATCCTCATCCTGGGAATTTGCGTTATACACCTGAAGGTCGTGTCGGGTTAGTGTTAATTTATCTTTTTATGTACGCTCTATAAGAAAATGTCTTCTTACTATAATCAGCAGAATCATGTTATACAGTGGGTCTGATGTTTTTGTAATGGTTTTCCTCTGTCACTCTCCCTTTGAGCAATAGTAACACCTTCCTAATTATGTTAGGTTTCTTGATTTTGGTTTGCTTTGTATGATGGAGAAGAAACATCAGCATGCTATGCTTGCAAGTATCGTTCACATAGTAAATGGAGATTGGGCTTCTCTTGTTTATGATTTGACTGCAATGGATGTTGTTCCACCAAGAACTAATCTACGCCGAGTGACAATGGTAATTCATCAGAATGCAGAATATTTATTTATTTATGGTTATTACAAGATGGAAAAAAACAAAGGTTCTTATCTCATACTCCCTCCGTCCCAAAATATAAGGGATTTTGGATGGATTGGACACATCCTAGTTTTACAAATCTGGAAAGGGAGCTTGTAGTGTTATTTAGTTTGTTATTCCATTATTATTTTTAATGTTTGTTGATTGGTAGGACTTGGAGGATGCGTTGGGTGAGGTGACCTTTGAAGATGGAATTCCAGATATCAAGTTTAGCAGGGTGTGTAGCTTTCCCTCTTTAAGTTCAGTTATAAACTGCGGCATGTCTCTCTCTTTATCGGCATCTTCCTGAACTGTTAAAAACATCCTTTAGGTGCTTGGAAAAATATGGTCTGTGGCATTTAAATACCACTTCCGTATGCCGCCGTACTACACGCTCGTCCTGAGGTCACTTGCCTCTTTGGAAGGTTAGTTTGTTTAGATGAAATTCAGTACTGAACTAGCTCAATTATAAGTATGTGTTGCTTTTTTGTTTCTGACTTGTACATATTTGAGCATGTGTTTTTTTTTGGAGGCTTACCAGCGTCCCCTTTTGTGTAATCTGTAGGGCTGGCCATTGCAGCAGATGGAACTTTTAAAACATTTCAAGCAGCATATCCATATGTTGTGCGGAAGCTTCTATCGGATAATTCAGTTGCAACAAGGAGACTCTTGCATCAGGTATTATTATTTTACCTCATTTGTTTACCTGTATAGTATATATGTTAAGTTGATTTAATTAATTGATTCACTTTTCTTATATTTTGTGCAACCTGGACAATATGTGCTCTTTGAAACAGTCAACTCACCCATTTTCGTTTGTACGAGATGTACAGAAATCCTGCAATAAAATTTGAAATTCTGAGTTTTGTTAGTTCACGATATCAAACGTCAAACACCCAAGGGAAATGGCATCGATGATAATAGAGTTCTGACACCAATTATTAATACACAGGCTATTTTCAACAAAAGGAAAGAGTTTCAGTGGAACAAGATTACAGTATTTCTAAAATTAGCATCAGCAAGGTCAGTTCTCTAGTTCTGAGCAGAATTGTGTGTAAACATCATGTTTTTTTCACTAAACTGTATGAACAGAATTTCTTCTACTATGATGCTTACTTGCTTAGTTTTCACGAGATGCATCTGATGATGTTTTCGTATGTGAAGGGGTAACTTCAGGTATAATACTGGCGTTTTGCCTGAGAGGAAGGGTTTGGATGTTGCAAAACTTGTAGAGATCAGTGATGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGGTATGTACTTTTCCTTGTTTCCCCTCTTTACCTGAATCAACTGGCCCTTTTGGCTGGATTTCTGAACGCATAAAACACACTAAACTAGAAATCAACTGAGCTCACCATACTTCCTGTTGCACAGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAGCCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAGGCTGAAGGTGATATTCTCCAAGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGTCTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGA</dnaseqindica> 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| External Link(s) |
