Difference between revisions of "BGIOSGA005960"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA005960| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005960, complete gene.| tag = P0010C0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA005960|
 
GeneName = BGIOSGA005960|

Revision as of 18:38, 20 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA005960

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005960, complete gene.

LocusTag

P0010C01.30

Ensembl Transcript ID

BGIOSGA005960-TA

Ensembl Protein ID

BGIOSGA005960-PA

Length

1638

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27437485..27439122

Sequence Coding Region

27438365..27439122,27437485..27438217

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27437485..27439122 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27437485..27439122 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGTTCACAGTGCGTTGAGCGTACAGTGCATTTCCTTTCCTACATGTCGCCTTTGCCGTCGCCTCAACCACACCGACCAGCGTCACATCCAGCAAGCAAAGTCCGTGCGTGTGGGCGTGGCTGACACCACGACGCAGGCGCAGGCGCAGGCGCTGCACAGGTTGGTTTCTAGAGGGTCGCCTCGCCCCGCCGTGCCGTGTCGAGGCGAGCCGTCCATCTCCGCCGCACCATCCAAACACCATCCGAAAGCGGTACAGTTCGCGCGTCCCGTCTCCCACCTGCTCTGCTTGCCACTGACTCCGTACTACGAGTGCCCGGTTGCCACCACTGCGCACAAGCACACGCGCACGCGGCGAGGCTGCTTGCTATCTCTTCCGGCCTTCCCTCTGCTCTGCTCCCCCTTGCCGGCTCGGGCTCTCGGTTCTTGCATTGCACCGCCGTCCACGGAGATGGTCGCTGCGGCGGAGTGGTGGGAGGCCACCATCGCGGCGTACACGGGGCTGTCTCCCGCGGCGTTCTTCACGGCCGTGGCGGTGGCCGCCGCGCTGTACGTCGCGGTGTCCGGTCTCCTCACGCGGCGGCCGCCGCCGCTGCCTAGGAGACAGGAGGAGGCGAGGGCGTCGCAGCCGCTGCCGCCACCGGTGCAGCTCGGGGAGGTGACGGAGGAGGAGCTGAGGGTCTACGACGGGTCCGACCCCAACAAGCCGCTGCTCATGGCCATCAAGGGCCAAATCTACGATGTCACGCAGAGCAGGATGTTCTATGGACCTGGTGGCCCATACGCACTGTTTGCAGGCAGAGATGCTAGTAGAGCTTTGGCGAAGATGTCCTTCGAGCTGGATGATTTAACCGGCGACGTTTCTGGCTTAGGCCCCATTGAGCTCGAGGCTCTACACGAATGGGAGGGCAAATTCATGAGCAAGTACGTGAAGGTTGGAACAATCAAGAAGATCATCCCGGTGTCAGAGGGAGATGCTGCAACTCATGGTGGGACATCTGATAGAGGCATCGATGTAGGCACAATAGAGAGCAACCGTGTGCCAGAACCAGAGGAAAATGGAGCTACAAGTCATGCAGATGCAGTGGAAAAATCAGATGCTGATGTGAGCACACACAGCCACGAGGATGTTGTAGAGAAGTCGGATGAGCTGCTGGAATCAGGTGTGGATACTAGAAGCACCCATGAAGATGCAGTGGGGAAGCCAAAGGAAGAAACAGAAGATGCAGATGTTCAGAAAACGATCAGCACTGAAGTTGCAGGTGAGGGAAAGGGAGCACCTGATGAAGATGAGAGGAACACGTGCAGTCTGGAAGACGCAATTGAGAAGCCAAAGGAAACGGCATACATTGATGTGAAGGATACAAGCGGCCATGAAGTTGCTGGAGAACCAAAGGAAGCACCAGATGTGGATGGGAACAATACAAGCAGCAATCAAGATGCAGTGGATGAGCCGAAGGAAGCGTCACATGAAGCGAAGGAAGCGTAG</cdnaseq>

Protein Sequence

<aaseq>MGVHSALSVQCISFPTCRLCRRLNHTDQRHIQQAKSVRVGVADTTTQAQAQALHRLVSRGSPRPAVPCRGEPSISAAPSKHHPKAVQFARPVSHLLCLPLTPYYECPVATTAHKHTRTRRGCLLSLPAFPLLCSPLPARALGSCIAPPSTEMVAAAEWWEATIAAYTGLSPAAFFTAVAVAAALYVAVSGLLTRRPPPLPRRQEEARASQPLPPPVQLGEVTEEELRVYDGSDPNKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGRDASRALAKMSFELDDLTGDVSGLGPIELEALHEWEGKFMSKYVKVGTIKKIIPVSEGDAATHGGTSDRGIDVGTIESNRVPEPEENGATSHADAVEKSDADVSTHSHEDVVEKSDELLESGVDTRSTHEDAVGKPKEETEDADVQKTISTEVAGEGKGAPDEDERNTCSLEDAIEKPKETAYIDVKDTSGHEVAGEPKEAPDVDGNNTSSNQDAVDEPKEASHEAKEA</aaseq>

Gene Sequence

<dnaseqindica>1..758#906..1638#ATGGGCGTTCACAGTGCGTTGAGCGTACAGTGCATTTCCTTTCCTACATGTCGCCTTTGCCGTCGCCTCAACCACACCGACCAGCGTCACATCCAGCAAGCAAAGTCCGTGCGTGTGGGCGTGGCTGACACCACGACGCAGGCGCAGGCGCAGGCGCTGCACAGGTTGGTTTCTAGAGGGTCGCCTCGCCCCGCCGTGCCGTGTCGAGGCGAGCCGTCCATCTCCGCCGCACCATCCAAACACCATCCGAAAGCGGTACAGTTCGCGCGTCCCGTCTCCCACCTGCTCTGCTTGCCACTGACTCCGTACTACGAGTGCCCGGTTGCCACCACTGCGCACAAGCACACGCGCACGCGGCGAGGCTGCTTGCTATCTCTTCCGGCCTTCCCTCTGCTCTGCTCCCCCTTGCCGGCTCGGGCTCTCGGTTCTTGCATTGCACCGCCGTCCACGGAGATGGTCGCTGCGGCGGAGTGGTGGGAGGCCACCATCGCGGCGTACACGGGGCTGTCTCCCGCGGCGTTCTTCACGGCCGTGGCGGTGGCCGCCGCGCTGTACGTCGCGGTGTCCGGTCTCCTCACGCGGCGGCCGCCGCCGCTGCCTAGGAGACAGGAGGAGGCGAGGGCGTCGCAGCCGCTGCCGCCACCGGTGCAGCTCGGGGAGGTGACGGAGGAGGAGCTGAGGGTCTACGACGGGTCCGACCCCAACAAGCCGCTGCTCATGGCCATCAAGGGCCAAATCTACGATGTCACGCAGAGCAGGTAGGCTTCCTTCATTTCTTGGGTACCGTAAAAATTCGATCGAAACTTTCTTTTCTTGGATCATGGCACTACCTATGACCATTGCAAATCACTAGCTCTAGCTGCAAAATGTTCGTCCATATTTCATCTTTCATCTCCGTTTTGCAGGATGTTCTATGGACCTGGTGGCCCATACGCACTGTTTGCAGGCAGAGATGCTAGTAGAGCTTTGGCGAAGATGTCCTTCGAGCTGGATGATTTAACCGGCGACGTTTCTGGCTTAGGCCCCATTGAGCTCGAGGCTCTACACGAATGGGAGGGCAAATTCATGAGCAAGTACGTGAAGGTTGGAACAATCAAGAAGATCATCCCGGTGTCAGAGGGAGATGCTGCAACTCATGGTGGGACATCTGATAGAGGCATCGATGTAGGCACAATAGAGAGCAACCGTGTGCCAGAACCAGAGGAAAATGGAGCTACAAGTCATGCAGATGCAGTGGAAAAATCAGATGCTGATGTGAGCACACACAGCCACGAGGATGTTGTAGAGAAGTCGGATGAGCTGCTGGAATCAGGTGTGGATACTAGAAGCACCCATGAAGATGCAGTGGGGAAGCCAAAGGAAGAAACAGAAGATGCAGATGTTCAGAAAACGATCAGCACTGAAGTTGCAGGTGAGGGAAAGGGAGCACCTGATGAAGATGAGAGGAACACGTGCAGTCTGGAAGACGCAATTGAGAAGCCAAAGGAAACGGCATACATTGATGTGAAGGATACAAGCGGCCATGAAGTTGCTGGAGAACCAAAGGAAGCACCAGATGTGGATGGGAACAATACAAGCAGCAATCAAGATGCAGTGGATGAGCCGAAGGAAGCGTCACATGAAGCGAAGGAAGCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005960