Difference between revisions of "BGIOSGA006856"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA006856| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006856, complete gene.| tag = OS02G02...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA006856|
 
GeneName = BGIOSGA006856|

Revision as of 18:42, 20 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA006856

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006856, complete gene.

LocusTag

OS02G0221100

Ensembl Transcript ID

BGIOSGA006856-TA

Ensembl Protein ID

BGIOSGA006856-PA

Length

3465

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7698541..7702005

Sequence Coding Region

7701613..7702005,7701435..7701449),complement(7700380..7701339,7699484..7699975),complement(7698541..7698612

Genome Context

<gbrowseImage1> name=IndicaChromosome02:7698541..7702005 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:7698541..7702005 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACACCATCTTCGTGCTCGGCCAAGAGTCCCGGCAGCGCATCCTCCACCGCGCCGCCGCGCGCCTCCCCGGCTGCGCCTACGTCTGCGCCTGGGCTCCCCTCCCCCTCGTCGCCGCCGCCGGCCTGCACCACCAGCGTCCTTCTTCCGGCGGCGCCGCCGGTGCTGCGCGTCTGCTCTACTGCGTCGACGGATGGCTCTCCGGTGGTGAGGACGGCGGCGGCTGCGTGCGCGCGCTGTTCGACGCGTACCGGGGATCCGTCTGCGGCGCCGTGACCGGGTGCGTGCCGGGGTGGGCGTACGTCGGCGGCGGCGGCGGCGCGTTCATGGAGCTCTCGGAGCTCGAGCTCGTCGCCTCCGCCTCGCTGCCGGTGCAGCAAAGCTTCTACCAGGAAGCTGGCATTAAGATGGCGGCGTTCATGGGATGCGAGAGCGGCGAGATCGAGGTCGGCTTCTCGACGGCGCCGGCGGAGAACTACGGTGGCGGCGGCGGCGGCGGCAGCTTGCAGGCGAGCGTGGAGCAGGTCTTCTCCGAGGACTTCTTCCAGCAGTCGCTGCTCGAGGAGCTCCTCCAGCTGCCGCCGACGCGGCCGTCGTCGTCGTCGTCCTCGCTCGTCGGCAGCCCGGCCGACGGCGCCGCCTCCACGTCGCTGCTCCGCACGATGACGCCCATGATGGCCTCGTCGTCCGCCACGCCGTCGCCCCGAGAGCTCGCGGCGCAGGTGGCGACGACGACGACGACGACGACGACGACGACGCCGTCGTCGTCGTCCCGGCTCCATCCGCGCCCTCCGGCGCCGCACCACGTCCACGTGTCGCCGTTCTCCCGCCACGGCGGCGTCGGCGGCAGCGGCGTCCTCCACTTCCCGAGCGCCGAGGCCGACGACGCTGCCATGGCACAGGCGATGCTCGACGTCATCTCCTCCCCCTCGACGTCGTCCTCGGCGGCGGCGCTGCACGCCCCGTGGTCGTCCGTCAAGCACCGCGCGCAGATCATCCGGTCGCCGCGGCGTGGGACGCCGACGACGACGGCGTTCCGGGCGTACAACGCCGCGCTGGCGCCGCGCGCGGCGGCGTCGCGGCGGCCGCCGGGCGCGCCGGGGCAGCGGATGATCAAGATGGGCTTCTCCATCCTGAGGAGGATGCACATGGTCAGGTGCAGCCAGGAGCGCGCCGCCGCCGCCGCCGCCGCTGCCAGCGCTGCCGCTGGGCAGCGGAGCGGCGGCGACGACGACGAGGACGCCACGGCCGCGCCGCCGCCGCCGACGAGCAGCCAGCTCCACCATATGATATCGGAGCGGCGGCGGCGCGAGCGGCTCAACGAGAGCTTCGAGCACTTGAGAGGTTTGCTTCCTCCAGGATCAAAGAAAGACAAGGCCACAGTTCTTGCCAAGACACTAGAGTACATGAACTTGCTGATAGCTCAAATCTCGGAGCTCGAAGCCAAGAACCGAGCACTCCAAACCCAAATCCACCAACGCGCCAATGGATCATCATCATCGAGATCATCAATGATCCGAACAGTCAACGAGGTTCACCATCACCATCATCACCAATGGCTAGCCGTCGCCGCCGCCGCCGGCGGCTCGCCGGAGAGGGTGCAGGTCCATGTGATCGGCGGCGGTGATCACGACGGCGGCGCATCGGCATCGTTGTCGTCGTCGGCGCCAGAGGTGACCGTGAGGGTGGCGGTGCGGGCGCCGGAGCGCGGCGGCGCCGACGTGTCGGAGCTCGTGCTCCGGGTGCTCGCACTGCTCAAGGCGATGGGCGGCTTCACGGTGGTGGCCGTCGACGCGAGGCAGCCGGGCGGCGGCGGCGGCAATGGCGTCGCTCAGGCCAGCCTAACACTACGAGCAACGCAAACAGTTTATCAAGAGCTTCATCTGGTAACTGCACCAAATCTGCAGAATTGCTTGAAGAGCTTCATCTAG</cdnaseq>

Protein Sequence

<aaseq>MDTIFVLGQESRQRILHRAAARLPGCAYVCAWAPLPLVAAAGLHHQRPSSGGAAGAARLLYCVDGWLSGGEDGGGCVRALFDAYRGSVCGAVTGCVPGWAYVGGGGGAFMELSELELVASASLPVQQSFYQEAGIKMAAFMGCESGEIEVGFSTAPAENYGGGGGGGSLQASVEQVFSEDFFQQSLLEELLQLPPTRPSSSSSSLVGSPADGAASTSLLRTMTPMMASSSATPSPRELAAQVATTTTTTTTTTPSSSSRLHPRPPAPHHVHVSPFSRHGGVGGSGVLHFPSAEADDAAMAQAMLDVISSPSTSSSAAALHAPWSSVKHRAQIIRSPRRGTPTTTAFRAYNAALAPRAAASRRPPGAPGQRMIKMGFSILRRMHMVRCSQERAAAAAAAASAAAGQRSGGDDDEDATAAPPPPTSSQLHHMISERRRRERLNESFEHLRGLLPPGSKKDKATVLAKTLEYMNLLIAQISELEAKNRALQTQIHQRANGSSSSRSSMIRTVNEVHHHHHHQWLAVAAAAGGSPERVQVHVIGGGDHDGGASASLSSSAPEVTVRVAVRAPERGGADVSELVLRVLALLKAMGGFTVVAVDARQPGGGGGNGVAQASLTLRATQTVYQELHLVTAPNLQNCLKSFI</aaseq>

Gene Sequence

<dnaseqindica>1..393#557..571#667..1626#2031..2522#3394..3465#ATGGACACCATCTTCGTGCTCGGCCAAGAGTCCCGGCAGCGCATCCTCCACCGCGCCGCCGCGCGCCTCCCCGGCTGCGCCTACGTCTGCGCCTGGGCTCCCCTCCCCCTCGTCGCCGCCGCCGGCCTGCACCACCAGCGTCCTTCTTCCGGCGGCGCCGCCGGTGCTGCGCGTCTGCTCTACTGCGTCGACGGATGGCTCTCCGGTGGTGAGGACGGCGGCGGCTGCGTGCGCGCGCTGTTCGACGCGTACCGGGGATCCGTCTGCGGCGCCGTGACCGGGTGCGTGCCGGGGTGGGCGTACGTCGGCGGCGGCGGCGGCGCGTTCATGGAGCTCTCGGAGCTCGAGCTCGTCGCCTCCGCCTCGCTGCCGGTGCAGCAAAGCTTCTACCAGGTCAGAACTCGGAACTCGGAACTCACCGGTGCATGCACTTGTTCGATCTGCTTGATCCACTTGCTTCTTGATCAATTTGGGTTCCATTAGTTGATCAAACACCTGAGAAATTTATGGATTTACTAACGAATTCGTATGATCTTTTGTGGTAAAATTCTTTCAGGAAGCTGGCATTAAGGTTCGTAATCCATTTCATAATATTGTTTCGTAAGATGATCGTGTTAGAAATCGAGAAGGATGAAGCTGACATGGGCCATTCTTGGTGGCGTGCAGATGGCGGCGTTCATGGGATGCGAGAGCGGCGAGATCGAGGTCGGCTTCTCGACGGCGCCGGCGGAGAACTACGGTGGCGGCGGCGGCGGCGGCAGCTTGCAGGCGAGCGTGGAGCAGGTCTTCTCCGAGGACTTCTTCCAGCAGTCGCTGCTCGAGGAGCTCCTCCAGCTGCCGCCGACGCGGCCGTCGTCGTCGTCGTCCTCGCTCGTCGGCAGCCCGGCCGACGGCGCCGCCTCCACGTCGCTGCTCCGCACGATGACGCCCATGATGGCCTCGTCGTCCGCCACGCCGTCGCCCCGAGAGCTCGCGGCGCAGGTGGCGACGACGACGACGACGACGACGACGACGACGCCGTCGTCGTCGTCCCGGCTCCATCCGCGCCCTCCGGCGCCGCACCACGTCCACGTGTCGCCGTTCTCCCGCCACGGCGGCGTCGGCGGCAGCGGCGTCCTCCACTTCCCGAGCGCCGAGGCCGACGACGCTGCCATGGCACAGGCGATGCTCGACGTCATCTCCTCCCCCTCGACGTCGTCCTCGGCGGCGGCGCTGCACGCCCCGTGGTCGTCCGTCAAGCACCGCGCGCAGATCATCCGGTCGCCGCGGCGTGGGACGCCGACGACGACGGCGTTCCGGGCGTACAACGCCGCGCTGGCGCCGCGCGCGGCGGCGTCGCGGCGGCCGCCGGGCGCGCCGGGGCAGCGGATGATCAAGATGGGCTTCTCCATCCTGAGGAGGATGCACATGGTCAGGTGCAGCCAGGAGCGCGCCGCCGCCGCCGCCGCCGCTGCCAGCGCTGCCGCTGGGCAGCGGAGCGGCGGCGACGACGACGAGGACGCCACGGCCGCGCCGCCGCCGCCGACGAGCAGCCAGCTCCACCATATGATATCGGAGCGGCGGCGGCGCGAGCGGCTCAACGAGAGCTTCGAGCACTTGAGAGGTTTGCTTCCTCCAGGATCAAAGGTAAACTATACTCCTAATAATTAACATGAGTTAATTGCACCATCATGTTAATGACCTTGTGGCTTGTGTCCTTGTTGCAATGCAAATTAAACCCATTTTAATTAGCTTCCAGAAAATCTTGTTCAAATTCAACCTGAAATGCTTCTAAACATTATTTGCTAGTTCAAATTGTTAGAATCTTATATTACTTGCATATTGTTCTCATCAGATTGAAGTGCAGATCAGGCGGAAATCATTAACGTTTTTCCATTATCTGACCAATGAAATACTACACATTGCCATTTTTCCAGTTTTAATTACTACAATTTTATTTTGCGTATTGCACATTAACTCTGCTAATTAATCTGTTCTACTAATTATTAATAGCTTCTCGATCTTAATCAAATCAACTACTGGCATTTCAGAAAGACAAGGCCACAGTTCTTGCCAAGACACTAGAGTACATGAACTTGCTGATAGCTCAAATCTCGGAGCTCGAAGCCAAGAACCGAGCACTCCAAACCCAAATCCACCAACGCGCCAATGGATCATCATCATCGAGATCATCAATGATCCGAACAGTCAACGAGGTTCACCATCACCATCATCACCAATGGCTAGCCGTCGCCGCCGCCGCCGGCGGCTCGCCGGAGAGGGTGCAGGTCCATGTGATCGGCGGCGGTGATCACGACGGCGGCGCATCGGCATCGTTGTCGTCGTCGGCGCCAGAGGTGACCGTGAGGGTGGCGGTGCGGGCGCCGGAGCGCGGCGGCGCCGACGTGTCGGAGCTCGTGCTCCGGGTGCTCGCACTGCTCAAGGCGATGGGCGGCTTCACGGTGGTGGCCGTCGACGCGAGGCAGCCGGGCGGCGGCGGCGGCAATGGCGTCGCTCAGGCCAGCCTAACACTACGAGCAACGGTACGGATGCTTACCCTGTTGAAACGTATGTTTCGTGCAAAAAATCATTCTTCCTCTGACCCAAATTATAAGATTATAAGACACATATAGTTTTTTTATACGGTGCCTAATGCTACACATTATATGAAATGTGAAAATATTTTCAAATACAAATCTAACTTATATACATGACACTAAACATAAATATTATGATTTATTATTTGTCAAAGTTATCAAGATTGAACTATGTCTTGTATTTTAAAATGGAGGGAGTATCCGTTTTTATATATATCATTCGTAGTGCAAGCTTAATGCTAGTAATATTTATATGTAGCCTTTATTTGAAACACAAGATTGATTTTATAAAATTACAAATAGAGATTGTATTGTTTCGTATATATGTTATATTTGGATTCCGTTCCAGACGTCTGTTAATTGTTGTGCATATCTCACCTAACTAGTCATAATCAATGATCACAAATGTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCCAAACTGTTAGCTGGTCTACTATCTTGAGCTGCTCCATTTTGTGTTTATTGTCATGGGCTCATGAGAGAGAGGTGAGTGACGAAGAAAGAGAGATTTGGTTGTTCAAACCTAGGTCAAAGTCAACCAGATCAGCCTAGTTTACCCTACAGCGACGGGGGTGGGGCCCACCGGAGAAAACTCAACTGGAAAACTTGACTGCCCCTGTTGGCTGTTGCTGTGTGGGATGCATGACGTCACGGACAGACAGCATACAAGTCCAAAACACTAGAGGCCCGGGTTTTCAATTCATTTCCATCCAAATCCCAATCGATGTCATGTTCCTTTCAGCAAACAGTTTATCAAGAGCTTCATCTGGTAACTGCACCAAATCTGCAGAATTGCTTGAAGAGCTTCATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006856