Difference between revisions of "BGIOSGA008564"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA008564|
Description = Glyceralde-3-phosphate dehydrogenase|
Definition = Oryza sativa Indica Group BGIOSGA008564, complete gene.|
tag = OJ0...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA008564| | GeneName = BGIOSGA008564| | ||
Revision as of 18:52, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA008564 |
|---|---|
| Description |
Glyceralde-3-phosphate dehydrogenase |
| Definition |
Oryza sativa Indica Group BGIOSGA008564, complete gene. |
| LocusTag |
OJ000223_09.15 |
| Ensembl Transcript ID |
BGIOSGA008564-TA |
| Ensembl Protein ID |
BGIOSGA008564-PA |
| Length |
5782 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:25209124..25214905 |
| Sequence Coding Region |
25209124..25209184,25212151..25212174,25212272..25212372,25212956..25213071,25213158..25213257 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome02:25209124..25214905 source=RiceIndica02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome02:25209124..25214905 source=RiceIndica02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGGGGCAACGTTCGAGCTCGTGGAGGCAACAATAGTGGAGGTGCAACGGCAAGGGGGAGGCAAGATTAAGATCGGAATCAATGGGTTCGGCCGCATCGGCAGGCTGGTGGCCAGGGTGGCGCTGCAGAGCGAGGATGTCGAGCTCGTTGCCGTCAACGATCCCTTCATCACCACCGAGTACATGACATACATGTTCAAGTATGACACCGTCCACGGCCAGTGGAAGCATCATGAGGTCAAGGTCAAGGACTCCAAGACCCTCATCTTTGGCACGAAAGAGGTTGCGGTGTTCGGCTGCAGGAACCCTGAGGAGATCCCATGGGCTGCGGCTGGTGCTGAATACGTTGTTGAGTCTACTGGTGTTTTCACCGACAAGGACAAGGCAGCAGCTCACTTGAAGGGTGGTGCCAAGAAGGTCGTCATTTCTGCTCCCAGCAAAGACGCCCCCATGTTCGTTGTTGGTGTCAACGAGAAGGAGTACAAGTCTGACGTTAACATTGTCTCCAACGCTAGTTGCACCACCAACTGCCTGGCTCCTCTCGCCAAGGTCATCAATGACAGATTTGGCATCGTTGAGGGTTTGATGACCACTGTCCATGCCATCACTGCTACCCAGAAGACTGTTGATGGGCCCTCGATGAAGGACTGGAGAGGTGGAAGGGCTGCTAGCTTCAACATCATTCCTAGCAGCACTGGAGCTGCCAAGGCTGTCGGCAAGGTGCTTCCTGCCCTCAATGGAAAGCTGACTGGAATGGCTTTCCGTGTTCCCACAGTCGATGTTTCCGTTGTTGATCTGACTGTTAGGCTTGAGAAGCCCGCCAGCTATGACCAGATCAAGGCTGCAATCAAGGAGGAGGCTGAGGGCAAGCTCAAGGGCATCCTTGGATACGTTGAGGAGGACCTTGTTTCCACTGACTTCCAGGGTGACAGCAGGTCCAGCATCTTTGATGCCAAGGCTGGCATTGCTTTGAGCGACACGTTCGTGAAGCTTGTGTCCTGGTACGACAACGAATGGGGATACAGCACCCGTGTGATCGACCTGATCCGTCACATGCACAGCACCAACTAG</cdnaseq> |
| Protein Sequence |
<aaseq>MGATFELVEATIVEVQRQGGGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHSTN</aaseq> |
| Gene Sequence |
<dnaseqindica>1..61#3028..3051#3149..3249#3833..3948#4035..4134#4207..4353#4441..4501#4607..4704#5081..5223#5366..5449#5561..5650#5737..5782#ATGGGGGCAACGTTCGAGCTCGTGGAGGCAACAATAGTGGAGGTGCAACGGCAAGGGGGAGGTCAGCATGTTGGGGTTATGGCTATTGGAGAGCAAAGATCGCTAGTGGTGAGTGGGCTCGGCGAGAGGTGGCTAGGTTGAGGAGATCGAGTGGTGGATGGCATTGGTGTGGGGAAAAGGGCAGGTGGAGGTCGAGGGTAGGAATGCCTCCTACCCATTGCCATCACCCTTTTTTTGCCTTATTATTACTGTGTCACTCAGCAATGTTTGAGAGGAGTGAGGAAGAAGATGAGTGACGAGGAGAGAAAGAAGAGAGTATAAGAAAAGGAGCATATGCAAAGGCCGACAGGTGCACCCCACGCTTGCCCCCACCTTCTTGGTTTACTCACACAAGAAAGAAAATAGTCTATGGTAGGTGGGCTCCACTTGCTGACTCAACGTGTCAACTGTGGTCAACCTACCATATTAGCAGAAATCACATCCTAAAATATCGAAGGAGTTGATTTGTGCTGGTTTTGAAAGATGGGGGAGGCGTTATTGTCGGTTTTGCGGGTGAGGGAGGCGATTCAATCAATAGGAAGAAATGAAGGAGAGGAAATAGACTTATTCCCTACTTGCAGCATCTCATTGGAGGTCCAGTACGTAAGGCCCACTACCCACCACGTCCACACACTGCAGGCCTTAAGGCCCAGTAAAATATGGACCACTCACGTGGGAGTTCTGTTTGGGCCCAACAGGTACTTGGGGACGCCGTTCCGACCCAAATTGGCGTGGAGTGCAAAACGGCCCGCTCTTCTGCTGCTTGCCAGAACTTCCGCATAATCTCTCTCCAGCTCTCCAGCCGTCCGAGCTTCTGAAGCGCTCTGCTACTTGTTCCTTGAGAGTTTGAGACGCTTTCCACCATCCAGCCAGCATCTTGCGCTAATCCGCTGCCGCCGTGAAGCCGATCCACCGATCCACGGACCACGGCCGTGAACAGTAAACTCCTCCGTCTTTTTGGCTTCATGCCTCCGACCCGCCTTCTGCTCGGACGCCTCCTCTGCGCGACCATCGGTGCTTGATCTTTTCTTTTTCTTTAGACAATGATAATGATCGGTGCTTGATCTGACCATGTATTATCTTGTCGGCGTCAGATTAAGCAAACTGCACTTTCATCTTCTCTGCATTTTAAGCAAACGGAGTATTAATTAATTAATTTCGGAAACAAAATGGTACCAATGGGCACGGCTGTAGCCATCAGCTGCCGGAGATCGAAAAGAGGTGGGAGACCGAAGATACAGCTCCGATACAGGTCACGGGTATCGTCGGGCTTCTCGAGAAAGCGGACGGCCGCCGCCCGCCGGACGCGTGCCTCGCGAGATGATCGAGCTGGCCGTTGTCATCAGACTGACGAGGAGGTAGTAGTGTGCCACGTATGTATAGCTTCGCGGCACCCCATTCCAATCAAATGATCCATGCGACGTGAACCATCCAAAGAGGATCGGTGGAATTTCGACTTGCACAGCCAGCCCATTCCTGCAAAGGCTTTTATCAACTTCTCTCCGTTCGAAAAAGGGTTTATCACGAGTGCACATTCAACGTGTACACGTATACTACATGGTTCGACACTCGAACAGTTCTTTTTCTTTTAAAGATGTTCGAACGTCAGTTCGGGCAAACAACGTTATCTGTTTTTTGGAGTGCACATTTTACAATCCCGAGGTTGCGATATGTGGCCCAATAATGTGCACTCTGCTGCGTTCCCCTTTGGAGAAGGTTGGATCTGATGTAGTATAGGGTGTGTTTATTTCACGCTAAAATTGAAAGTTTGGTTGAAATTGAAACGATGTAATAGAAAAATTGAAAGTTTATGTGTGTAGAAAAGTTTTGATATGATGAAAAAATTAAAAGTTTAAAAAAAATTTATAACTAAACAAGACCATAATATATTAATCACTTGCGTTGACAACAATTGGCACACTCAAACTCCACAAGCCATCTCATACACTCCTATTATATTATTATTAGTTGTATTTTTTGCTGGGAACATTAGGTACAGTCTACTATTTTAAGGAGGCCAAAACGAAAAGCACATCCTCTTTTCTTTTTCTTTTTAACGCATTGACATGACAGTGTAGCACCAACAACTTCAACACCAGCACGATCAAGCATATTCTACCATAGAAACTTCAACAGTTCAACCAACATCAGCATCAACTCCTGTTCCGTTCAAAAGAACGTCCAAACTCTACCTAATTGACAAATGATTTCACCACGTCCCTTTCCATTTTCCCTTGTTTTTTTTCCTCCTCGAAGAGGTCGCTTTCTGTACCGTCTAGAAGACGTCATGTGTTCTTACTATAGAATGTCCACAGAAAATCCTGCATTCCACGGCGGCCGAAATCCAATCTTGCCGATGGTTTGGTTTCCTCTTCCTCACTTTTTCTTTCTTTCTTCCTCTCCAAGAAGACAAGTCACCCTTCCCCACGCCCCTCTCTCTCCTGACGAGTGGGGCCCAAGTCGTGCGGTCATAGACTTTTTACTACTACAACCAACGTTCGCGACCCACCGAAAGTTCCAGAAACCCACCGCTCTCCGGGCCCCACCTGTCTCCCTGGGCCCGCATGTCATACGCGTGCCCGCCACCGCGCTGCGGGCGCCGCCTCTCCCGGTGGGTTTAGAAACTGTGAGGCCGATCCGCATACCGCGGCGGCCGTGGTGGGCCCACCGTCTAGCGAAAACCACCCCCGCCGCCGCGCGTGCCACGTTTACTCCCGTGGGCCCCGCAACGAGGCACAAACCCTAGGCCGCTTATATAAACCCGACCCGCCCCGCTCCGGTGATCGGATCCCCACAGCTTTGCGTTTGCACTCCTCTCGATCTCCATTCGTTTTTGAGTTCCTCGTTTGCTCCGCCTCTCTTTCACTCATGGGTAAATCCGCCAATCTTTGATTTTATTTTATTTTGAGTTTGATTTTGGGTTTGATTTTGTATGTGTTTTTGGCTGATTGGTTTGTGATTTTTTTTTGGTTTCTCTGGAATGAGCAGGCAAGATTAAGATCGGAATCAATGGTGAGTGTTCGAGCATACGATTGGATCTGGTTATTTTATGGTATGGGGTTTATTCGGTGCGGATTTGTGATGGATTTTTTTGGTTTGGATGATGCAGGGTTCGGCCGCATCGGCAGGCTGGTGGCCAGGGTGGCGCTGCAGAGCGAGGATGTCGAGCTCGTTGCCGTCAACGATCCCTTCATCACCACCGAGTACATGGTACCGTCTCTTTCCCTCGCCTCCCCCGCGAATTAGTTGATCTGGTGCTTTTGAGAATGTATGATATGATGATTGTGCTCGCTTCGGTTAAATTGAATTGCACGAATTCGGTGCCCATCAATTGGGATTGAGGCATCCTGGTAGATTTGTTAGGACTATTTGTTATAAACCTTGTTTGGATTTGTGATCTGCAGTACTGTAGATGTCACTGTCGTTCTGCTCTGATGGACCACAACGCACTCTGTTTATACCATGGATTCATAAATGCAATTCTTGTCTGCTTTGACTGAATATTTCTGTAGATCCATATAGTAGATGGTTTGTGTTCATCTCTTCTTTTATCTGATGGTGCTATGGATGGGATGATTGGTATGAGTCTATTACACTACAATATTTATAAAGTCATGCAGACATGCATACTGATGTGGGTCTCTTTTGCATGCTTCAATGCATTTAGAAACTATGTGTAGTTGAGTACTTGAATGGCGTTCCTACCTACAAGACCTGATTTCCTTGATAGTACAGAATGCTAATTTTGGTTTGATCTGTTGTATATGCTAAATTGGACTGTCGTTGCGTGCAGACATACATGTTCAAGTATGACACCGTCCACGGCCAGTGGAAGCATCATGAGGTCAAGGTCAAGGACTCCAAGACCCTCATCTTTGGCACGAAAGAGGTTGCGGTGTTCGGCTGCAGGTTTGTTGCCATCCATTTCAGTATCATTTTTGTTCATCTGCTCACAAGAGTTACAGCCAGTCTGATAAGCCAATATTCTGATGTAGGAACCCTGAGGAGATCCCATGGGCTGCGGCTGGTGCTGAATACGTTGTTGAGTCTACTGGTGTTTTCACCGACAAGGACAAGGCAGCAGCTCACTTGAAGGTACATTCCTGTGTCAATTTTTCTGTTCAGGGTCAAGCTGTAGATCTGTTCTCAATCATTTTTCATATGCAGGGTGGTGCCAAGAAGGTCGTCATTTCTGCTCCCAGCAAAGACGCCCCCATGTTCGTTGTTGGTGTCAACGAGAAGGAGTACAAGTCTGACGTTAACATTGTCTCCAACGCTAGTTGCACCACCAACTGCCTGGCTCCTCTCGCCAAGGTGTTTATTCTGATATAATTTGGCGCCTGCTCCTGTGCGCATGTAGCTACTACTGGAGTTTTAAGCTAACATTTTGTCTTGTTACAGGTCATCAATGACAGATTTGGCATCGTTGAGGGTTTGATGACCACTGTCCATGCCATCACTGGTAGGCATCACTTTGCTTAATATTAATATTGGACTGAGTAAAACGTTTGGTACCATCTATCTGATCTGATTTCAATTCAAGTGATTAACATTTGAATTCCTACAGCTACCCAGAAGACTGTTGATGGGCCCTCGATGAAGGACTGGAGAGGTGGAAGGGCTGCTAGCTTCAACATCATTCCTAGCAGCACTGGAGCTGCCAAGGTATAAACTTGTATTTCTGTATGTATTACATTGTTGATAATGTTTCGTTATCAGACATTTGCACCTAATATTGATATGTTTCAAGGATCTCGTGGTATCGTTTTGTATTTACTTTATAATGCAAGTATAACATTAAAAAATTGACTTTCCACTCCTTGCTAGTTTGCCCCCCTTTTCCTTTGCAAAATTAAGGTTTGTTTCGTTGCCTGCCAAATAACAGTAGCGGTGTTTAATCAGATGGAATGATGGATCTCACAAAATGTGGCAACCACCTTATTTTTGTTGTGTTTTGTTAAAACTACACTGAACCTTCTGTATCGGGCACCATTAAACCTGTTTATCGTGTACTCAATTAGTTTTACTCAATTTCTCATAGGCTGTCGGCAAGGTGCTTCCTGCCCTCAATGGAAAGCTGACTGGAATGGCTTTCCGTGTTCCCACAGTCGATGTTTCCGTTGTTGATCTGACTGTTAGGCTTGAGAAGCCCGCCAGCTATGACCAGATCAAGGCTGCAATCAAGTGAGTAATTCTTAACAACTATGGGCTCTGTAAATCTTTATGAACTTCTGATTTCTGGACCGAGAAGAATCTGCTTGTGTTTTCAGAAAAGAAAATTATTTGCTGCCTTGAATGTTTCACTAATTTTGCTACATCTTCTCAGGGAGGAGGCTGAGGGCAAGCTCAAGGGCATCCTTGGATACGTTGAGGAGGACCTTGTTTCCACTGACTTCCAGGGTGACAGCAGGTAAATTTACCCATTGCAGTTTCTTGTATAATTATGGGTCATATTGGTTACCTCTAGGCTCTTGCTATCCGACCTATTAATTTACCAAAAAAATGCACTTATCCATCACAGGTCCAGCATCTTTGATGCCAAGGCTGGCATTGCTTTGAGCGACACGTTCGTGAAGCTTGTGTCCTGGTACGACAACGAATGGGGATACAGGTTAGTGTGTGCTGCATTATGAAAGTGTAATTCTCTGTTACATGCTCACGACAGTCTGCTTAAACCACATTTTCCTCTGATTGCAGCACCCGTGTGATCGACCTGATCCGTCACATGCACAGCACCAACTAG</dnaseqindica> 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| External Link(s) |
