Difference between revisions of "BGIOSGA015502"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA015502|
Description = Japonica Group Os04g0178300 (Os04g0178300) mRNA,|
Definition = Oryza sativa Indica Group BGIOSGA015502, complete gene....") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA015502| | GeneName = BGIOSGA015502| | ||
Revision as of 16:02, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA015502 |
|---|---|
| Description |
Japonica Group Os04g0178300 (Os04g0178300) mRNA, |
| Definition |
Oryza sativa Indica Group BGIOSGA015502, complete gene. |
| LocusTag |
NM_001058706.1 |
| Ensembl Transcript ID |
BGIOSGA015502-TA |
| Ensembl Protein ID |
BGIOSGA015502-PA |
| Length |
6569 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:6557974..6564542 |
| Sequence Coding Region |
6564266..6564542,6563191..6563374),complement(6562366..6562580,6561643..6561763),complement(6561384..6561496 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome04:6557974..6564542 source=RiceIndica04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome04:6557974..6564542 source=RiceIndica04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGATCGATGGCATCAGGACAGCACTGAGATCAATCGGAGAGGGAGAGATTAGCATCTCAGCCTATGACACTTCGTTGGTTGCCCTTCTGAAGAGGCTAGATGGGGGTGATGGTCCTCAGTTCCCATCAACCATCGACTGGATCGTTCAGAATCAGCTACCGGATGGTTCATGGGGTGATGCCTCCTTCTTCATGATGGGAGACCGGATCATGAGCACCCTCGCTTGTGTTGTAGCGTTGAAGTCATGGAACATCCACACCGATAAATGCGAGAGAGGTTTGTTGTTTATCCAAGAAAATATGTGGAGGTTGGCCCATGAGGAAGAAGACTGGATGCTAGTTGGATTTGAGATTGCCTTGCCCTCGCTCCTAGACATGGCTAAGGACCTGGATCTTGACATCCCTTACGATGAGCCAGCCTTGAAAGCAATATATGCCGAGAGAGAAAGGAAGCTTGCCAAGATTCCAAGAGACGTGCTACACGCTATGCCAACAACTTTACTTCATAGCCTTGAGGGAATGGTTGACTTGGACTGGGAAAAGCTCCTCAAGCTCCGGTGTCTCGATGGGTCCTTCCATTGCTCCCCTGCTTCGACGGCTACTGCTTTCCAGCAAACAGGAGACCAGAAATGCTTTGAATACCTCGATGGAATCGTCAAAAAGTTCAATGGAGGAGTTCCCTGTATCTACCCTTTGGATGTGTACGAACGCTTATGGGCCGTCGATAGGCTGACGAGGCTGGGCATATCAAGGCACTTCACAAGTGAAATTGAGGATTGCTTAGACTACATTTTCAGGAACTGGACTCCAGATGGATTAGCTCACACAAAGAACTGCCCGGTAAAAGATATCGATGACACGGCCATGGGTTTCCGTCTCCTCCGACTTTACGGCTACCAAGTCGACCCATGCGTGTTGAAGAAGTTCGAAAAGGATGGCAAGTTCTTCTGCTTGCACGGGGAGTCCAACCCATCCTCTGTCACCCCAATGTACAACACTTACCGGGCCTCCCAGCTCAAATTTCCTGGCGATGACGGTGTCCTTGGGCGAGCTGAGGTGTTTTGCCGCTCATTCCTCCAAGACAGGAGAGGCTCAAACAGAATGAAGGACAAGTGGGCCATCGCCAAGGATATCCCAGGCGAGGTTGAGTATGCTATGGACTACCCATGGAAAGCAAGTTTACCGCGTATTGAAACAAGGTTGTACTTGGATCAATATGGAGGTAGTGGCGATGTATGGATTGGGAAGGTCCTGCACAGGATGACTCTTTTCTGCAACGACCTGTACCTCAAGGCAGCTAAAGCTGACTTCAGTAATTTCCAGAAAGAGTGCCGAGTTGAGTTGAATGGCCTTAGAAGGTGGTATTTGAGGAGTAATCTGGAGAGGTTTGGAGGGACTGATCCACAGACTACACTGATGACATCCTACTTCTTAGCTTCAGCGAACATCTTCGAGCCAAACCGAGCAGCGGAACGTCTTGGATGGGCTCGCGTAGCGTTGCTTGCCGATGCCGTCTCCTCTCACTTCAGGAGAATCGGGGGACCAAAAAATTTGACCAGTAATCTTGAAGAGCTTATCAGCCTTGTTCCATTTGACGACGCTTATTCTGGCAGTCTTCGTGAAGCTTGGAAGCAGTGGCTCATGGCATGGACTGCAAAGGAGAGCAGCCAGGAGTCAATTGAAGGGGACACGGCAATATTGTTGGTTCGTGCCATCGAGATTTTTGGAGGACGGCATGTTTTGACTGGGCAAAGACCGGACCTTTGGGAGTATTCCCAGCTCGAGCAGCTCACCTCCTCCATCTGCCGCAAACTGTACAGGAGGGTTCTTGCCCAGGAGAATGGGAAAAGTACGGAGAAAGTTGAGGAGATAGACCAGCAATTGGATTTGGAGATGCAGGAATTGACTCGGCGCGTTCTTCAGGGCTGCAGCGCTATTAACAGACTAACCCGGGAGACGTTTCTCCATGTGGTGAAGAGCTTCTGCTATGTCGCCTACTGCTCACCTGAGACAATTGATAACCACATCGACAAGGTCATATTCCAAGATGTGATTTAG</cdnaseq> |
| Protein Sequence |
<aaseq>MIDGIRTALRSIGEGEISISAYDTSLVALLKRLDGGDGPQFPSTIDWIVQNQLPDGSWGDASFFMMGDRIMSTLACVVALKSWNIHTDKCERGLLFIQENMWRLAHEEEDWMLVGFEIALPSLLDMAKDLDLDIPYDEPALKAIYAERERKLAKIPRDVLHAMPTTLLHSLEGMVDLDWEKLLKLRCLDGSFHCSPASTATAFQQTGDQKCFEYLDGIVKKFNGGVPCIYPLDVYERLWAVDRLTRLGISRHFTSEIEDCLDYIFRNWTPDGLAHTKNCPVKDIDDTAMGFRLLRLYGYQVDPCVLKKFEKDGKFFCLHGESNPSSVTPMYNTYRASQLKFPGDDGVLGRAEVFCRSFLQDRRGSNRMKDKWAIAKDIPGEVEYAMDYPWKASLPRIETRLYLDQYGGSGDVWIGKVLHRMTLFCNDLYLKAAKADFSNFQKECRVELNGLRRWYLRSNLERFGGTDPQTTLMTSYFLASANIFEPNRAAERLGWARVALLADAVSSHFRRIGGPKNLTSNLEELISLVPFDDAYSGSLREAWKQWLMAWTAKESSQESIEGDTAILLVRAIEIFGGRHVLTGQRPDLWEYSQLEQLTSSICRKLYRRVLAQENGKSTEKVEEIDQQLDLEMQELTRRVLQGCSAINRLTRETFLHVVKSFCYVAYCSPETIDNHIDKVIFQDVI</aaseq> |
| Gene Sequence |
<dnaseqindica>1..277#1169..1352#1963..2177#2780..2900#3047..3159#3801..4033#4473..4588#4702..4800#5262..5441#5555..5642#5742..5951#6348..6569#ATGATCGATGGCATCAGGACAGCACTGAGATCAATCGGAGAGGGAGAGATTAGCATCTCAGCCTATGACACTTCGTTGGTTGCCCTTCTGAAGAGGCTAGATGGGGGTGATGGTCCTCAGTTCCCATCAACCATCGACTGGATCGTTCAGAATCAGCTACCGGATGGTTCATGGGGTGATGCCTCCTTCTTCATGATGGGAGACCGGATCATGAGCACCCTCGCTTGTGTTGTAGCGTTGAAGTCATGGAACATCCACACCGATAAATGCGAGAGAGGTATGTGTATATCACTAGATTTCCTTTTCTCCATTGTCTCTTCTTGTGGACACAATCCTTGATGTTTCCTTTTGATGGACTGAACTTTTTGATTTTGTTTACTGGTTTGTTTTGATTTTCTTTAAAAAATAAATGTGTTTATTAAAATAATTTAAAAAAAATCAAAGTTTTACAAATTCACACCCCCTGACATCACTTAGTGTAGCGTTTTTTAAAAACACCCTCCTAAATAATATTTTTTATAACATGACACATGGTCATTGAGATATGTTAACAGTCGTCGTACGAAGGAGCTGACCATTTTTCAGGCAACACTCTTATAAAGGGGGCCACTTGTAAAATGGCAGCCTAGCATATTTTGTAAGCGACCTCCTTGTAACCCTCCCAAAATAGAGTTTCTCTATATAGGAAGTGGATTTTTTCCCTTGAGAGGATGTCCCCTTGTTTTGTGCATGGTATTTAAAAAATCATGAAAAATTTGAAAAAAAATATCAAGATAGATCAATATATGATACATCTTTACACAAACATACAAGTTGAAATATTACTTATACAATTTAAAAAAAAAAAACAAATTTAACCACGAATTACATGTTTCATTCATAGTTAAATTTGTTACTTTTGTTTCTAGTTGTATAAGTTAAATTAGAATATGTATGTTTGTGGAGTGACATATCACATATTGTTCAATCTTACTATTTTTTTTTGAATTTTCTAATGACTTTTAAGAGATGAAAAATAAGAAGACATCCCCTTAAGCAATTAATAGAGTTTCTCTATGTGTGTGCGTGTGTATATAATATATGTATACATATATTGCGCTATCAGCATGTTTGTTTTTGGATTTACTATGCCAATAATTTGAGAGATGACAAGGATTTATTGTCGTAGGTTTGTTGTTTATCCAAGAAAATATGTGGAGGTTGGCCCATGAGGAAGAAGACTGGATGCTAGTTGGATTTGAGATTGCCTTGCCCTCGCTCCTAGACATGGCTAAGGACCTGGATCTTGACATCCCTTACGATGAGCCAGCCTTGAAAGCAATATATGCCGAGAGAGAAAGGAAGCTTGCCAAGTATGTATGCCTATATCTACCTATTAATTATTTTGTTTAGTAAAATTTTAGTCATGCCACACACGATAGAATATAAAGGATAAAATCCATCGTGAAAGCGCCCGCTTGCTTCTCGGTCTCTCTCACAAATAGCTACTCTCTCCGGGGTGATAATACTTATCCTTTTAGACAAGGACACGGTCTCTAAAAAGTAACTTTGACAACTATTTTCTATTATAATATATATAGAAATATTAACAAATATATGATTTTATTAAAGTACTTTTTAAACTAATCTACACATATGGTCTTCATATTTTAAGATAAATATTTTAGAAATTATTTTTAATCAAAGATTTTAATGTTTGACTTTACCCTTGTTCAAAATGACTAATATTATCGGTCCGAAGTGAGTAGCAGATATGGACTTATTGCATATGCCCGAAACATGTAATATGTGGATCTATCGTATATTAGGGTTGCATTACTGTAAAACCATTCACAAATTATTCTCCTTTTTTGCTTTTCTTATACAGTTAAAATTATTGCGAGATTTAGAGTTATTTTTGCTCTAATATAACGCATTCTAACATCTTTTACGATGAATGAATGTTTTGCATTCAAATTCTAGGATTCCAAGAGACGTGCTACACGCTATGCCAACAACTTTACTTCATAGCCTTGAGGGAATGGTTGACTTGGACTGGGAAAAGCTCCTCAAGCTCCGGTGTCTCGATGGGTCCTTCCATTGCTCCCCTGCTTCGACGGCTACTGCTTTCCAGCAAACAGGAGACCAGAAATGCTTTGAATACCTCGATGGAATCGTCAAAAAGTTCAATGGAGGAGGTAATTATTGAAGCCGATTTACCAAAATATTTTTTGTTGATTTACATGCACAAAATTTCAGAATTCCATAAAGTATATTAATTAATTTCTCCTTATATTAGCTAGTTTCTTCTTCCTTCCTCTCCCAGTACACTGACTCAATTCAACACTGTATCTGTATGCAATGAAACAGAAGCGCACTTCTGTATGAAACAGAACCCCTCCCCTCCACACGAAAAATAGAGCGATAGATTAACACATGATTAAATAAGTATTAGTTATAAAAAATTTAAAAAATAAATTAATATGATTTTTTAAAGCAACTTTCATATATAAACTTTTTATAAAACATGTACCGTTTAATAGTTTGAAAAGCGTGCATGCGGAAAATGAGGAAGATAGGTCGGGAATCTATGGGAAAGAACGCACCCAAGAGGCTAGGTTCAGTAGTTCGTTTAGCTTTTGCAATCTCCTTGTTTTTTTTCATTAGCACTACTCCCAAACTTGTAAATGGTACCTTTATTGACAACTTTTTATATACAACCTTTTCCAGAAAAAATAAATAAACTTACAGTATTATTATGTTTAATAATTACAGCTTACTTATTCATTATGTTTTCCAGTTCCCTGTATCTACCCTTTGGATGTGTACGAACGCTTATGGGCCGTCGATAGGCTGACGAGGCTGGGCATATCAAGGCACTTCACAAGTGAAATTGAGGATTGCTTAGACTACATTTTCAGGTACTAATTAACTTTTAACATACATGTATATATCTGTATTACCAACATGTATACAGATACTTTATGCACGTAGGTAACCAAAGTGAATTAATTAATGTTTAGTTGACCATATATATATAATATGGATATTAATTATACTGGAACAGGAACTGGACTCCAGATGGATTAGCTCACACAAAGAACTGCCCGGTAAAAGATATCGATGACACGGCCATGGGTTTCCGTCTCCTCCGACTTTACGGCTACCAAGTCGACCCATGTAAATACTAGTCCCTCGGTCTTTTTTCTTAATTAAATTGTTTAAAGTTTCAATAAGTTAATTTATAGAAAATTATAGCAACATTTCCAATACAAATATATTCAATGTTACATTTAATTAAACTAGCTTGGTGTTGTAGATTTTGCTATTTTTCCTATAAATTTGATCAACCTAAATAATTAAGGTCTAACTTGGAAAACAATCAAAGCAACTTATAATATCAAAATATAAATACATGGAGTAGTTTACTAACAGTTGCTAATTAACGTCTAATAATTAAGATATCCAACAAATTAAAATTACTACTTATTGTTTTAAAGTACTTATTGTTCGAACAAATCTCACACAAACCAACAAGATGTACAAAGATTATATTACATGGTTTACCCTCATTAAATACATGCCAATTACTTTTCCAAAGCATATGAACCATTGGAGTTGTGACTGCATTAATGTATAACCGCATTCATAAAGGATAGAGAGAGAAGATGACCTCTACTAGAAGTACTTTGGAAACGTGACAATGATAAGTATTTTGATATAAAATTTAAATTCTAGAATGATAAGTAATATAAAATGGAGAGACTATTTACTTTAATAATTGAACCTAGCTAATGTGCTCAAACGATAATGCCATGCAGGCGTGTTGAAGAAGTTCGAAAAGGATGGCAAGTTCTTCTGCTTGCACGGGGAGTCCAACCCATCCTCTGTCACCCCAATGTACAACACTTACCGGGCCTCCCAGCTCAAATTTCCTGGCGATGACGGTGTCCTTGGGCGAGCTGAGGTGTTTTGCCGCTCATTCCTCCAAGACAGGAGAGGCTCAAACAGAATGAAGGACAAGTGGGCCATCGCCAAGGATATCCCAGGCGAGGTATGTTAAGTCCTACTACTCCCTATGCCAAAAAAAAAAAAGAGCTTTTCAGGATGAATCTGAACATGCATTTGTTCAAACAATCGAAAATCAATGCAATTTTATTAAAGTATATATGAATGGGATGTGATAATACTTCGTTCCTATTGAAAATGCAAGTTTTTGATGCTAAGCTACCAACTAATTCATTGCGTCTTCTACTTCAATATACTCCTACTCCCTCCGTCCAAAACAAAAACCTTTCAGGATGAATGATATGCATTTGTCTAGACTGGAACAGAGAGAGTGCCTAGCTAGCAATGGAAAATTAAGGCAAATTTATTAAAGTATATATGGATGGAATGTGATAATACTTCAATTCCTATTGAAAATACAAGTTTTTTTATGCCAAGCTACCAACTAATTTATTCTGTCTTCTACTTCAATATATATTTATTAGGTTGAGTATGCTATGGACTACCCATGGAAAGCAAGTTTACCGCGTATTGAAACAAGGTTGTACTTGGATCAATATGGAGGTAGTGGCGATGTATGGATTGGGAAGGTCCTGCACAGGTAATTAACCGTAGCTTCAGATGTAATAATATGTATTTTGTCTATTCGTTAATGATAGAATTACCTGCAGCAAAACAAATAGTCCCTTCTTGTTCTAAGTCTGAATTTTTCAGGATGACTCTTTTCTGCAACGACCTGTACCTCAAGGCAGCTAAAGCTGACTTCAGTAATTTCCAGAAAGAGTGCCGAGTTGAGTTGAATGGCCTTAGAAGGTATGTCCTATTAATCCCGAATTTGAGCCAATAACTCTTTGACAAATACCATATATCTATAGTAATTTAAAATAAAGTAGTGGTGGTGGTGAGTCCATTGCTCTCACCACTAGTTGCCTAAACTGATATGTAGGACTAGCTCGAAAGGCATTTTCACATTGAAATATCTTATACCTCTAACCTCTCCCTTTAATTGTCTAAAAGCAATGTTTGAAAAGTAAAAAAAAAAGAAATATAAAACACCTAATTAATTTTAAAAATAAGTTCTAAATTGTTCTCTTTTCTGCAATGGATCAATGATATATTTTTTTAATCCCGTAAACAATGTATGCGCATTTTGCTAGTATTTTTTAAGACAATTGAAGATGAGTAATATTGCTACACATCTCCATCCTCTGTATGATAGCATACCACATATATGATTAATTTCTTACTCAAAATTATTTACACTTTATATGCAGGTGGTATTTGAGGAGTAATCTGGAGAGGTTTGGAGGGACTGATCCACAGACTACACTGATGACATCCTACTTCTTAGCTTCAGCGAACATCTTCGAGCCAAACCGAGCAGCGGAACGTCTTGGATGGGCTCGCGTAGCGTTGCTTGCCGATGCCGTCTCCTCTCACTTCAGGAGAATCGGGTATGTTTAACCGTCTCCTCTCACCAAATCGATCACTTGATTTTGTGCTTTAGTGATCGATCAATGCATGGATGCAACATGAGCTTACCTGCATGCTATATATATGCTTGCAGGGGACCAAAAAATTTGACCAGTAATCTTGAAGAGCTTATCAGCCTTGTTCCATTTGACGACGCTTATTCTGGCAGTCTTCGTGAAGCTGTAAATTAATTTATCAAATCAAAACCGTGTTAAAACTTCAAATGGAAACATAAATATATATGTGCCAAATATTTATAAATTTCGTTTTATAAACTGCAGTGGAAGCAGTGGCTCATGGCATGGACTGCAAAGGAGAGCAGCCAGGAGTCAATTGAAGGGGACACGGCAATATTGTTGGTTCGTGCCATCGAGATTTTTGGAGGACGGCATGTTTTGACTGGGCAAAGACCGGACCTTTGGGAGTATTCCCAGCTCGAGCAGCTCACCTCCTCCATCTGCCGCAAACTGTACAGGAGGGTTCTTGCCCAGGTAAATATTTATATTATAACCTGAATTTTTATATACACACAAAACACTGTCCTTTTAATCAAGTTGTGTATACAAATACACACAAATACAGTAAAACGTGCATAGTGCTTGTTATAACTAAAACACGTCCCTTACGTAGTAAAATTTTTACCGCAAGTTATATCGTTGTAAAATATCTTAGAGTAAAAAACTTTTACTAATCGATACTTTATAGTACAATTTTTACTAGCTCAATAGGCCATTTGATGATTATAGTCCCCGGCTCCCCGCTGTAAAAATTTCACTACCTTGCTTTTGTTAGCTATAGCACATCCTGGCTATGGTATAGTACTTCTACCATACACAAACATGAATATTGTTAATTTGCAACGATGAAAATATTTAACTTGACTTCAGGAGAATGGGAAAAGTACGGAGAAAGTTGAGGAGATAGACCAGCAATTGGATTTGGAGATGCAGGAATTGACTCGGCGCGTTCTTCAGGGCTGCAGCGCTATTAACAGACTAACCCGGGAGACGTTTCTCCATGTGGTGAAGAGCTTCTGCTATGTCGCCTACTGCTCACCTGAGACAATTGATAACCACATCGACAAGGTCATATTCCAAGATGTGATTTAG</dnaseqindica> 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| External Link(s) |
