Difference between revisions of "Os08g0112000"
(Created page with "{{JaponicaGene|
GeneName = Os08g0112000|
Description = Protein of unknown function DUF889, eukaryote family protein|
Version = NM_001188429.1 GI:297725988 GeneID:9269978|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0112000| | GeneName = Os08g0112000| | ||
Revision as of 20:43, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
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Structured Information
| Gene Name |
Os08g0112000 |
|---|---|
| Description |
Protein of unknown function DUF889, eukaryote family protein |
| Version |
NM_001188429.1 GI:297725988 GeneID:9269978 |
| Length |
7012 bp |
| Definition |
Oryza sativa Japonica Group Os08g0112000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:635702..642713 |
| Sequence Coding Region |
635702..635750,635849..636046,637205..637290,637585..638293,638376..638541 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:635702..642713 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:635702..642713 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggatagcaactttggggcctctcgaccgacatcgttgacaggatcagccggtgatcctccccttggagttctttcagacattactaatctcagtgctgctgaattaagaaggaaacgtgctagagagaggtacgctttgttgagtgtggacgagaaggaggcgaggaataaaaaggcccgtgagaagaggcgccaaaagaaggaggaatgccaaggaggaaatcaatctggtgctgctgtgaaagaaagtgaagcttcccatctcaacatcacacctagacgtctcccatttacaatcatcaacaatgtagctcactatggtcccaatgaaattagatgtgtattaagattgttattgattatggcgagcaaacaattacatagatcttcttattatgttggcacatcaatagataatgaagtggtgtgtgcgccatccagtattacaaaagaccatctacagtcaaagctacctcaatgtagcgacaagcctgcgactcttacaacggagcagaagcaagctaaggtgaaccggcagagatcacgacatcaatcactaacaaaagaacaaagattagatatgaacgcccgacgtagggtagcaaggcaaaatatgccagatgtggaaatacatgatatgaatgcccgccttaggtcaagacgacaaagtgttactccaggggaaaggtctgctcttttggcacgacgtaatgcactctatgcagctaggcgtgacaaaccatgtgctgaatcaattgcattggagtgccctgagggtagcagcccgtcgttgctagatccaacgccttgcttggaaacaaccggtgatgtgccagctacatcgaacctgcaagctgagcatgctgcagatcatcttgcacgatcgagcaccttcgaggatggtatcatatatatatgttatcgttcatacttgcaatttgtaaccttccgcatactaacttttcattccactatagatgatatggattccttcatggatgatgacaccgacgatgaatactacttgtttgctaggctaggcgatgatgaggatgacgatatggtacaatccgatgacgacgacacgcaagcaccgacctcttcgattcctgatccatttgactgtgtgtatagcaacatcccacaaagcacaaatgttctgaagcctgagcctgactgtaaacattgtggcgccaagaggttccaagagtctagtccagagcatctcgagttgtatttctacgatgacgatccaaccttgagtcacagattccgtcgttctccgagccttgaccaggatgtgatcaggactgtttcagacgtcctttggaacaacccgtactcggagacatttagaagtctggggcaggctgatgacctcgcgaactaccgcgtgacactaaatctagatcataggttggaccaaaggcgttacaatgtgccggtgacaactgaggtcgctgctgtctgggttgaaggaaacgagagaaggaagtttgagcctagcgtgacaatatacggtaacgaccgtacccgtaaatgcatccaacctttctacggatgttacgatccactctcgtatcctttgttcttccctagaggagagagtggttggcatcaaggtcttccaaaggacaaaataaccatggaggctgcaaacacgcgtcatggcgatgatcctaattgtaacagcgggatacgagtttctgtaagggactactactgctacaaattccagatgcgtcgtgggattttcaatcctatacttcacgggggacgcctgttccagcagttcgctgttgacatgtacatcaaggttgagagctcccgtctggactatgtgaggaacaaccagaaggagataagggccgacctatatcaagggttaatggacagcatccaggctggggagagtcgagcaagcgcggtcggcaaacggactgtgttgccagcgtcgttcgtaggtggtggccgaaatatgaagcgccgctacatggatgccatggccttagtacagaagtatgggaagccagatgtattccttacaatgacaagcaacccaaagtgggatgaaattactcgtgagcttgagcctggccagacaccacaagatcgtcctgatcttgtggtctgtgtctttcgagccaagttagaggacctaaagaagcagttgttcgagaaacacattcttggcaaggttattgcacatgtttatgttgagttccagaagaggggtctgccgcatgcacacttcttgttgatcatgagtagtcgatacaagctaacatctgcggaccaatatgactgcatcatctcggctgagcttcccgataagaaaaagtatagagagctgtacgatatggttgttaagcatatgatgcatggcccttgtggtccactcaatggtaaatgccaatgcatgcgagatggaaagtgtaggaacaactacccacgagagttcaaccctacaacctcgcaaggcaaggattcatacccgttgtataggagacgtaatgacggcaagagtaggatggttagaggccaccctctcgataataggtgggttgtcccgtacaatccatatcttctaaggatgtacaactgttacatgaatgtcgaggtttgttcaagtatcaaggcaataaagtacctctttaaatacctatacaagggacacgagagggcctcgatatccataaacgaggcagataacaacggcgaaatcgatgagattcagcgctacagggatgcgaggtgggtgacccctccagaagccttgtggcgtatatatgggtttgacatatgccacatctcgccgtctgtgaggcagttgcaacttcatctgccaaacatgcacatgttggcttccgatgcagacaaggatctccgtgatgttcttgataaggaagacgcaggcaggtcgatgcttacagcgtatttcgaggcaaacaggcagcatgtctgggctcgagatatcctttatagggatttcccaatgtggtttacttggcagacgccaggctccacctcattcgaagacctacgtattgttgatggcgtggtcatgccttcgttccgtgctgcagctgaaagaaggggtcttatagaggcagacaacaccctcgacgagtgccttacggaggccggggtcttccagatgccactgtcgctacgcaggttattcgctaccatattggtgtattgcgaacctagcgatgtccgtggtctttgggacaaacatctagatgccatgtctgatgactacaagcgtaacaacacatgccctcatgttgtccaacagatggtgctgatagatatccgaggcatgctacaatcaatgggaaaggaaatcacatcgtttccgctccctgaaattgacgaatcacatgatagtaccagaggagatcccagagagattattgaggagtcatccattggtgtggagacggacgatatgaacctctcagaccagctcaatgatgagcaaaggtctgcattcaacaaaatcatgaatgcagttggcagtgctcaggggggtgttttcttcgtagatggcccaggaggcacgaggaagactttcctgtatagggcgctgctagctacggttcgcggcaaaggagatatagcggtggcaaccgcgacgtcgggtgttgcagcttctataatgcctggaggccggaccgcacattcgcggttcaagatccccctcaacattgaggaagggtcttattgcagcttcaccaaacaaagtgggacggcgaagcttctccagatggcgtcgcttataatatgggatgagacctccatgacaaagaggcaagcggttgaggccctcaatatgagcatgagagatataatgggttgcccgcattctccgtttggagggaagacgattgtgtttggaggggatttcaggcaggtgctcccggtcattaggaagggcactaggtctcagataacagatgccactctacgcaggaacattgacccagccaacgggctttgcaatgggacaaggctggtggttcgtcagttcggaaaaaatgctattgacgcggagattgttgtagggcagcatgctggaaagagagttttccttcctcggatacctctatgtccttctgatgatgagatgtttccgtttcgcttcaagaggaagcaatttccggttagattgagctttgcattgaccatcaataaggcgcagggtcaaaccattccaaatgcaggcgtctacttaccacagcctgtcttctctcatggtcaactatacgtcgcgctgtctagagcaacctctagaacaaacataaaaatactatcgatgccggtagaagacaagaaacaaaataaaaagtctaagcgtactggcgtgaaggacaatgagaagaaaggaaaggaattgtctaaacaggctgcaacatacacaaaaaaatattgtgtttag</cdnaseq> |
| Protein Sequence |
<aaseq>MDSNFGASRPTSLTGSAGDPPLGVLSDITNLSAAELRRKRARER YALLSVDEKEARNKKAREKRRQKKEECQGGNQSGAAVKESEASHLNITPRRLPFTIIN NVAHYGPNEIRCVLRLLLIMASKQLHRSSYYVGTSIDNEVVCAPSSITKDHLQSKLPQ CSDKPATLTTEQKQAKVNRQRSRHQSLTKEQRLDMNARRRVARQNMPDVEIHDMNARL RSRRQSVTPGERSALLARRNALYAARRDKPCAESIALECPEGSSPSLLDPTPCLETTG DVPATSNLQAEHAADHLARSSTFEDGIIYICYRSYLQFVTFRILTFHSTIDDMDSFMD DDTDDEYYLFARLGDDEDDDMVQSDDDDTQAPTSSIPDPFDCVYSNIPQSTNVLKPEP DCKHCGAKRFQESSPEHLELYFYDDDPTLSHRFRRSPSLDQDVIRTVSDVLWNNPYSE TFRSLGQADDLANYRVTLNLDHRLDQRRYNVPVTTEVAAVWVEGNERRKFEPSVTIYG NDRTRKCIQPFYGCYDPLSYPLFFPRGESGWHQGLPKDKITMEAANTRHGDDPNCNSG IRVSVRDYYCYKFQMRRGIFNPILHGGRLFQQFAVDMYIKVESSRLDYVRNNQKEIRA DLYQGLMDSIQAGESRASAVGKRTVLPASFVGGGRNMKRRYMDAMALVQKYGKPDVFL TMTSNPKWDEITRELEPGQTPQDRPDLVVCVFRAKLEDLKKQLFEKHILGKVIAHVYV EFQKRGLPHAHFLLIMSSRYKLTSADQYDCIISAELPDKKKYRELYDMVVKHMMHGPC GPLNGKCQCMRDGKCRNNYPREFNPTTSQGKDSYPLYRRRNDGKSRMVRGHPLDNRWV VPYNPYLLRMYNCYMNVEVCSSIKAIKYLFKYLYKGHERASISINEADNNGEIDEIQR YRDARWVTPPEALWRIYGFDICHISPSVRQLQLHLPNMHMLASDADKDLRDVLDKEDA GRSMLTAYFEANRQHVWARDILYRDFPMWFTWQTPGSTSFEDLRIVDGVVMPSFRAAA ERRGLIEADNTLDECLTEAGVFQMPLSLRRLFATILVYCEPSDVRGLWDKHLDAMSDD YKRNNTCPHVVQQMVLIDIRGMLQSMGKEITSFPLPEIDESHDSTRGDPREIIEESSI GVETDDMNLSDQLNDEQRSAFNKIMNAVGSAQGGVFFVDGPGGTRKTFLYRALLATVR GKGDIAVATATSGVAASIMPGGRTAHSRFKIPLNIEEGSYCSFTKQSGTAKLLQMASL IIWDETSMTKRQAVEALNMSMRDIMGCPHSPFGGKTIVFGGDFRQVLPVIRKGTRSQI TDATLRRNIDPANGLCNGTRLVVRQFGKNAIDAEIVVGQHAGKRVFLPRIPLCPSDDE MFPFRFKRKQFPVRLSFALTINKAQGQTIPNAGVYLPQPVFSHGQLYVALSRATSRTN IKILSMPVEDKKQNKKSKRTGVKDNEKKGKELSKQAATYTKKYCV</aaseq> |
| Gene Sequence |
<dnaseqindica>1..49#148..345#1504..1589#1884..2592#2675..2840#3105..3580#3669..5006#5118..6075#6547..7012#atggatagcaactttggggcctctcgaccgacatcgttgacaggatcaggtgagtttttcaaaaaatataataataggtcaatagctcaacctttgccctatgttcttatttgttccattcatatattttttccattcttggttcagccggtgatcctccccttggagttctttcagacattactaatctcagtgctgctgaattaagaaggaaacgtgctagagagaggtacgctttgttgagtgtggacgagaaggaggcgaggaataaaaaggcccgtgagaagaggcgccaaaagaaggaggaatgccaaggaggaaatcaatctggtgctgctgtgaaaggtaactacaagccaactcaactcatcttgggccatctattctattgattaacccacatagcgagtgaccaaagatatccacaaaaaagccatctattctattgatttgcatctcttcaccgaatatgaatgaagaacccaacagctattgcatcttatttttgaaggggtgcatgcttatttcctttagctttcacacacttccaatgccagacaatgcaatgcataaccataaatttaatcaagcaaccatttaaggcagaaaaaaatacttactgcaagtgtgtgggataagtgtgttaaatgcctcatcaaatgataacaatcacgcatgctggacagagctagcccacatggcattccaccttagaaaaaaagaaaaactattagccttcttgctcaactccatgtatcctcggtctctactctatgatgctctcctcacccattgctccctcactgcctttcttcttgttagaaagtataccacagaaaaaaaatagaatttataaaaactgacaaacaaatgatattttgcatgctccatggtaccagccaccaaaaaacacaaaaaggaaaacaatatgatgcaattttagtgttatggatgttcgcatcagattattgtttgcatttcatgttactaaaaaatatatggccccatgttaagaggtaaacaactgccttcagtatattttgtggcttcgtgcacatttggtagcatatattagcatgcatagatataactataggatgactgcagaaacaaagtgagaatagggaaacaaggcatgaaagcagaaggtgatacaattataatctccatcttcatgtactctaatacccagaggatcctccgtcgcctcatatatttctctattctttgctgtaatatgtatcggtactaatgaaaagatattctgccaattatgccaaacaatcttctaatttcgcggcgtcggaacagccccacttggcgatattacaaatataagcgctgctgatataacgacgtgccaaatggaagtgaatgattctcccacactgcatcaaggtaagaataacatattattacattccgcatgctataagagggcggaatgcaatgccattattgttgtgtacagtctgataacgtgatggttctatgttttaatagaaagtgaagcttcccatctcaacatcacacctagacgtctcccatttacaatcatcaacaatgtagctcactatggtcccaatgaagtacctttgagctgcgtaattcaaacaacccaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatattactgtatgttacaacaggaagtgaaactcattatgatccaatcctaacaagtggaaaccaaaatacacatagcccaatgcatgaatgtggtatatttgaaggcaatgatcagaatgacgacatctctctaggtaatactaatatttcttcataatatgtttgttactaccaaattgtcaacaaaaaacctctttgcgaacagattagatgtgtattaagattgttattgattatggcgagcaaacaattacatagatcttcttattatgttggcacatcaatagataatgaagtggtgtgtgcgccatccagtattacaaaagaccatctacagtcaaagctacctcaatgtagcgacaagcctgcgactcttacaacggagcagaagcaagctaaggtgaaccggcagagatcacgacatcaatcactaacaaaagaacaaagattagatatgaacgcccgacgtagggtagcaaggcaaaatatgccagatgtggaaatacatgatatgaatgcccgccttaggtcaagacgacaaagtgttactccaggggaaaggtctgctcttttggcacgacgtaatgcactctatgcagctaggcgtgacaaaccatgtgctgaatcaattgcattggagtgccctgagggtagcagcccgtcgttgctagatccaacgccttgcttggaaacaaccggtgatgtgccagctacatcgaacctgcaagctgagcatgctgcagatcatcttgcacgatcgagcaccttcgaggatggtatcatatatatatgttatcgttcatacttgcaatttgtaaccttccgcatactaacttttcattccactatagatgatatggattccttcatggatgatgacaccgacgatgaatactacttgtttgctaggctaggtaccatcgtcgttatacctgaaactctctttcacttcagtagatatttgaaactaaactacttcccactaaacaatcccaggcgatgatgaggatgacgatatggtacaatccgatgacgacgacacgcaagcaccgacctcttcgattcctgatccatttgactgtgtgtatagcaacatcccacaaagcacaaatgttctgaagcctgagcctgactgtaaacattgtggcgccaagaggttccagtacgaaccgtcgggcttctgttgtcgggatggcaagataaagcttgtagaaaacgagacaccccctgaactgatgaggctctagacaagctcggatccagatgccaagcatttccgggataacattagatatttcaacggtcacttctcgttcactacccttggtgtaagccttgacaaggcctttgcaaacatgagctcgggtgtgtacacatttcgggcccatgttcagatctatcataacatacattctttcggtcctagagagtctagtccagagcatctcgagttgtatttctacgatgacgatccaaccttgagtcacagattccgtcgttctccgagccttgaccaggatgtgatcaggactgtttcagacgtcctttggaacaacccgtactcggagacatttagaagtctggggcaggctgatgacctcgcgaactaccgcgtgacactaaatctagatcataggttggaccaaaggcgttacaatgtgccggtgacaactgaggtcgctgctgtctgggttgaaggaaacgagagaaggaagtttgagcctagcgtgacaatatacggtaacgaccgtacccgtaaatgcatccaacctttctacggatgttacgatccactctcgtatcctttgttcttccctagaggagagagtggttggcatcaaggtcttccaaaggacaaaataaccatggaggctgcaaacacgcgtcatggcgatgatcctagtaagtttatcttcgtactgtgttgactaaaacaattgataattgtccgttacatgactgcactaacccagacgtttctcacgtgcagattgtaacagcgggatacgagtttctgtaagggactactactgctacaaattccagatgcgtcgtgggattttcaatcctatacttcacgggggacgcctgttccagcagttcgctgttgacatgtacatcaaggttgagagctcccgtctggactatgtgaggaacaaccagaaggagataagggccgacctatatcaagggttaatggacagcatccaggctggggagagtcgagcaagcgcggtcggcaaacggactgtgttgccagcgtcgttcgtaggtggtggccgaaatatgaagcgccgctacatggatgccatggccttagtacagaagtatgggaagccagatgtattccttacaatgacaagcaacccaaagtgggatgaaattactcgtgagcttgagcctggccagacaccacaagatcgtcctgatcttgtggtctgtgtctttcgagccaagttagaggacctaaagaagcagttgttcgagaaacacattcttggcaaggttattgcacatgtttatgttgagttccagaagaggggtctgccgcatgcacacttcttgttgatcatgagtagtcgatacaagctaacatctgcggaccaatatgactgcatcatctcggctgagcttcccgataagaaaaagtatagagagctgtacgatatggttgttaagcatatgatgcatggcccttgtggtccactcaatggtaaatgccaatgcatgcgagatggaaagtgtaggaacaactacccacgagagttcaaccctacaacctcgcaaggcaaggattcatacccgttgtataggagacgtaatgacggcaagagtaggatggttagaggccaccctctcgataataggtgggttgtcccgtacaatccatatcttctaaggatgtacaactgttacatgaatgtcgaggtttgttcaagtatcaaggcaataaagtacctctttaaatacctatacaagggacacgagagggcctcgatatccataaacgaggcagataacaacggcgaaatcgatgagattcagcgctacagggatgcgaggtgggtgacccctccagaagccttgtggcgtatatatgggtttgacatatgccacatctcgccgtctgtgaggcagttgcaacttcatctgccaaacatgcacatgttggcttccgatgcagacaaggatctccgtgatgttcttgataaggaagacgcaggcaggtcgatgcttacagcgtatttcgaggcaaacaggcagcatgtctgggctcgagatatcctttatagggatttcccaatgtggtttacttggcagacgccaggtaaatactggaaaaaaagagagaaaggaggccaggtcgggagaattgtgtgtgcccacccggcagagggggagcgttactattttcgggtgctgctaaaccatgtggcaggctccacctcattcgaagacctacgtattgttgatggcgtggtcatgccttcgttccgtgctgcagctgaaagaaggggtcttatagaggcagacaacaccctcgacgagtgccttacggaggccggggtcttccagatgccactgtcgctacgcaggttattcgctaccatattggtgtattgcgaacctagcgatgtccgtggtctttgggacaaacatctagatgccatgtctgatgactacaagcgtaacaacacatgccctcatgttgtccaacagatggtgctgatagatatccgaggcatgctacaatcaatgggaaaggaaatcacatcgtttccgctccctgaaattgacgaatcacatgatagtaccagaggagatcccagagagattattgaggagtcatccattggtgtggagacggacgatatgaacctctcagaccagctcaatgatgagcaaaggtctgcattcaacaaaatcatgaatgcagttggcagtgctcaggggggtgttttcttcgtagatggcccaggaggcacgaggaagactttcctgtatagggcgctgctagctacggttcgcggcaaaggagatatagcggtggcaaccgcgacgtcgggtgttgcagcttctataatgcctggaggccggaccgcacattcgcggttcaagatccccctcaacattgaggaagggtcttattgcagcttcaccaaacaaagtgggacggcgaagcttctccagatggcgtcgcttataatatgggatgagacctccatgacaaagaggcaagcggttgaggccctcaatatgagcatgagagatataatgggttgcccgcattctccgtttggagggaagacgattgtgtttggaggggatttcaggcaggtgctcccggtcattaggaagggcactaggtctcagataacagatgccactctacgcaggtcctatctttgggattgtatggttcaattgaagcttgttcgcaatatgagggcgtagagcgacacgtggtttgcggactacctccttcgagttgggaatggaaccaaggaggtgaacaaggaaggactcataggccttccttcggatatttgcgtgtcgtgcaaagggaatgaaacagacctcaaaaggctcatcgataccgtgttccccaacctaaacgataacctgacggacccaaactacatcacatgtagggccatattgtccactcggaatgagttcgtcgatcgaataaacatgaagatgattgagcggtttagaggggatgtgatgacatatcatagttttgattgagtagaggatgaccctcataactattacccgccagaattcttgaactctctaactccaaatgggctacctccgcatgtgcttaagctgaagataaactgccccatcatgcttttgaggaacattgacccagccaacgggctttgcaatgggacaaggctggtggttcgtcagttcggaaaaaatgctattgacgcggagattgttgtagggcagcatgctggaaagagagttttccttcctcggatacctctatgtccttctgatgatgagatgtttccgtttcgcttcaagaggaagcaatttccggttagattgagctttgcattgaccatcaataaggcgcagggtcaaaccattccaaatgcaggcgtctacttaccacagcctgtcttctctcatggtcaactatacgtcgcgctgtctagagcaacctctagaacaaacataaaaatactatcgatgccggtagaagacaagaaacaaaataaaaagtctaagcgtactggcgtgaaggacaatgagaagaaaggaaaggaattgtctaaacaggctgcaacatacacaaaaaaatattgtgtttag</dnaseqindica> |
| External Link(s) |
