Difference between revisions of "Os08g0117100"

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(Created page with "{{JaponicaGene| GeneName = Os08g0117100| Description = RNA-binding region RNP-1 (RNA recognition motif) domain containing protein| Version = NM_001067394.1 GI:115474524 Gen...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0117100|
 
GeneName = Os08g0117100|

Revision as of 20:43, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0117100

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001067394.1 GI:115474524 GeneID:4344522

Length

2458 bp

Definition

Oryza sativa Japonica Group Os08g0117100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:952689..955146

Sequence Coding Region

952741..953232,954056..954157,954261..954566,954904..954963

Expression

GEO Profiles:Os08g0117100

Genome Context

<gbrowseImage1> name=NC_008401:952689..955146 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:952689..955146 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcctcctcccactacgccctcctccaccaccacctccccaaccctctccatccccgtcacctctcctcctcctcctccccttctcctccccctcctctccacctccacctccacctccaccgccaccgcctcgccctctccaccgcccgtttcttccgcctcgcggagcggcgagccagcgcggggccactggtgttcgaaacggaggaggagaggagtgggtggtcgggtgcggaggcagcggagtcgaactacgacgatgaggaggatgaggaggaggagcaagggtgggcgggcggcaatgccgcggggtggcgcggggagagccacgaggatgatcaggaggagggttccggttccggggaggggcggaggccgcggcggtcgcggccgcgcgagctgttcgtatgcaatcttccccgccgctgcgacgtcgacgacctctacgagctcttcaagccctacggcaccgtcctctccgttgagatttcccgtgaccctgagactggacttagccgaggatgtggtttcgtcacaatgcgttctctcccagaagctcggacagccatgaacgctctcgatggatttgacctggatgggcgtgaaatgcttgtaaaactatcatccgacgttgtttctaaaaggagaaacatcaacatgactcatacgccacctgtgaaagaccacatcttcgagagcccacacaagatctacgttggcaacatcgcgtggtctgttgagccacaagaattgcgagagtacttctctcagtgcggaaccgtcgtcagtacaaggctgctgacagatcgcaaaggagggagaggccgtgtctatggattcctctcatttgcttcagctgaagagcttgaggctgcattgaagcttgacaatacgcattttcatggacggaacatcctcgtcaggcaagctcatgaagagcgtcaggcacactga</cdnaseq>

Protein Sequence

<aaseq>MAASSHYALLHHHLPNPLHPRHLSSSSSPSPPPPLHLHLHLHRH RLALSTARFFRLAERRASAGPLVFETEEERSGWSGAEAAESNYDDEEDEEEEQGWAGG NAAGWRGESHEDDQEEGSGSGEGRRPRRSRPRELFVCNLPRRCDVDDLYELFKPYGTV LSVEISRDPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRR NINMTHTPPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGR GRVYGFLSFASAEELEAALKLDNTHFHGRNILVRQAHEERQAH</aaseq>

Gene Sequence

<dnaseqindica>53..544#1368..1469#1573..1878#2216..2275#gtatcatcctcttcctcccgcccccgacctctcttccctatccaccccatccatggctgcctcctcccactacgccctcctccaccaccacctccccaaccctctccatccccgtcacctctcctcctcctcctccccttctcctccccctcctctccacctccacctccacctccaccgccaccgcctcgccctctccaccgcccgtttcttccgcctcgcggagcggcgagccagcgcggggccactggtgttcgaaacggaggaggagaggagtgggtggtcgggtgcggaggcagcggagtcgaactacgacgatgaggaggatgaggaggaggagcaagggtgggcgggcggcaatgccgcggggtggcgcggggagagccacgaggatgatcaggaggagggttccggttccggggaggggcggaggccgcggcggtcgcggccgcgcgagctgttcgtatgcaatcttccccgccgctgcgacgtcgacgacctctacgagctcttcaagccctacggcaccgtcctctccgttgaggtatacgcatatcattcatttctttctttctttgcctcattgctactgcaattccaacacctggtggtaaatctggtgatatactatgttactgctactgctaagaaagtaagaatcaccgaccagctcaacccaaaattttactgaccaattgaatggggtggacactgtcaacaagtgaattggggagctcatcatatatccaatgcaaacggtgactaaggctgtgtttttctcccagttttcccaactcacctcactcattttcagcgtgcacgcttttcaaactgctaaacggtgtgttttttgcaaaaagaatctatatgaaagttattttaataaaatcgtattaatccatttttcaaaaaaaaaagttaatacttaactaatgatgcaataataacgtgcttcgttttacgtgccggggacccctcctcccgaacgcagcctaagactcccctttaagttttgaatgattgtcaagttgttgagtaggcctggaggcacaaactgcaagttagttctttgatgtttcagacttatatgatctctttgcaaaacacctgctcttgcattttgatgctaaatatatgtatttactagagaactataagattaatacatcaagcaaagtttggaacttatattagatgctactacttgcttggaatggatgaatgacccctacttgattccacttagctagcatgtttaaattcttcaattcccatatcacaccggtttgcatatcatgatgttagaaagcgcttcagattgattttagaggtgcgctgtgatgttcatatctgatgacaacccgcagatttcccgtgaccctgagactggacttagccgaggatgtggtttcgtcacaatgcgttctctcccagaagctcggacagccatgaacgctctcgatggatttgtgagtcacacaagagccctgcagtttccccttctcacactgtatttatctgcttgatttacaagtgacatctaaccttctcttgcattcatctctcttctaggacctggatgggcgtgaaatgcttgtaaaactatcatccgacgttgtttctaaaaggagaaacatcaacatgactcatacgccacctgtgaaagaccacatcttcgagagcccacacaagatctacgttggcaacatcgcgtggtctgttgagccacaagaattgcgagagtacttctctcagtgcggaaccgtcgtcagtacaaggctgctgacagatcgcaaaggagggagaggccgtgtctatggattcctctcatttgcttcagctgaagagcttgaggctgcattgaagcttgacaatacggtataatgctagccattttccttacttttctgagtcactgcatttgcttgatgctagaacagaactcataaattcctccttggatctctgttcccaagaaacttcatatctggatttgcttcggaagctgctaatggggtagttttgtgttagaaaatctgaaatgaggattatgggtgtacatttgtatttctaagtttctgcttgagtagaactttgccagttaactgtagcttatgaggcttaagcaatcctggttcacattttctccagattattttctgagcatgtacctctcatttgccatggcttacgctgattattgtttttgcaacagcattttcatggacggaacatcctcgtcaggcaagctcatgaagagcgtcaggcacactgaaccgtccagggattattggagacctattgcaattttgtctagcttatttgctgattgagttcgtccttgggcgcaatgctgcacatcaagactaacatgtgtttttttttttggtatgtattgagtattctgtattctagtgacttgagtacaatgcgaatgggtactagcaatctttccact</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0117100, RefSeq:Os08g0117100