Difference between revisions of "Os08g0119000"

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(Created page with "{{JaponicaGene| GeneName = Os08g0119000| Description = Similar to COP9 signalosome complex subunit 3 (Signalosome subunit 3) (FUSCA protein 11) (FUSCA11) (Fragments)| Versi...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0119000|
 
GeneName = Os08g0119000|

Revision as of 20:43, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0119000

Description

Similar to COP9 signalosome complex subunit 3 (Signalosome subunit 3) (FUSCA protein 11) (FUSCA11) (Fragments)

Version

NM_001067405.1 GI:115474546 GeneID:4344535

Length

4285 bp

Definition

Oryza sativa Japonica Group Os08g0119000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1049639..1053923

Sequence Coding Region

1049753..1049940,1050067..1050188,1050326..1050572,1050655..1050712,1050788..1050877
,1051839..1051901,1052305..1052394,1052588..1052746,1052822..1052943
,1053492..1053564,1053654..1053722

Expression

GEO Profiles:Os08g0119000

Genome Context

<gbrowseImage1> name=NC_008401:1049639..1053923 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1049639..1053923 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacggtggagacgctggtggcgcacatccagggcctctccgggagcggggaggagctggcccacctccacaaccttctccggcaggccgacggcgagcccctgcgcgcccactccgccgccctcctccccttcctcgcccagctccacccgagcgcccactccctcggcttcctctacctcctggaggcgttcgcgtcttcggcttccaacctgagggcgcagggcggcggggacttcctggtcaccacggccgatttcctcgtctcctgctcggcggagcagatacgcttggcgcctgataagtttctgagtgtgtgtagggtgttcaagaatgaggtcatgcagctcaacgcgccgattagagggattgcccctctgcgggcggcaatccgcaagattcagacttcgtctgaagagctgaccccgatccatgcggattaccttctcctgtgcctgcttgcgaagcagtacaaggctggcctaagcgtcctggaagacgacatactcgaagttgatcagccaaaggacttattcctctattgctactatgggggaatgatatacattgggctgaagaagttcactatagcactggattttcttcacaatgctgttaccgtcccaatgtcatcattgaatgctattgctgttgaagcttacaagaaatacatcctagtttcgctcattcagaatgggcaggttccatcatttccaaagtacacatcttcaactgctcaaaggaacctcaaaaatcatgctcaggtttatgttgacctgtcaacatgctacagcaaaggtaactactctgaattagaggagtatatccagctgaatgctgagaagtttcaatcggacaacaaccttggacttgtgaagcaagtgctctcctcaatgtacaagcgaaacatccagaggttgacacagacctacttgactctttcgcttgaggatattgccagctctgttcaacttaaaaccccgaaggaggctgagatgcatgtgcttaggatgattgaagatggtgagatccatgcaaccataaaccagaaggatgggatggtcagctttcatgaagatcctgagcaatataaaagctgtgagatggttgagcatattgactcgtctattcaaaggttgatggctttgtccaagaagctgtcttctattgatgagaacatctcgtgcgatcctgcatatttaatgaagactggaagagagcgtggtggaagattcgattacgatgacttcgactcagttccgcacaaatatttttga</cdnaseq>

Protein Sequence

<aaseq>METVETLVAHIQGLSGSGEELAHLHNLLRQADGEPLRAHSAALL PFLAQLHPSAHSLGFLYLLEAFASSASNLRAQGGGDFLVTTADFLVSCSAEQIRLAPD KFLSVCRVFKNEVMQLNAPIRGIAPLRAAIRKIQTSSEELTPIHADYLLLCLLAKQYK AGLSVLEDDILEVDQPKDLFLYCYYGGMIYIGLKKFTIALDFLHNAVTVPMSSLNAIA VEAYKKYILVSLIQNGQVPSFPKYTSSTAQRNLKNHAQVYVDLSTCYSKGNYSELEEY IQLNAEKFQSDNNLGLVKQVLSSMYKRNIQRLTQTYLTLSLEDIASSVQLKTPKEAEM HVLRMIEDGEIHATINQKDGMVSFHEDPEQYKSCEMVEHIDSSIQRLMALSKKLSSID ENISCDPAYLMKTGRERGGRFDYDDFDSVPHKYF</aaseq>

Gene Sequence

<dnaseqindica>115..302#429..550#688..934#1017..1074#1150..1239#2201..2263#2667..2756#2950..3108#3184..3305#3854..3926#4016..4084#gacgcgaagaggaagccgcagcacaagaaaaccaaaccccaaccgcggcgacgcgaacggcaagcaaaacccccacacttcccggcggcggcggcggcggtgacggcggcggcgatggagacggtggagacgctggtggcgcacatccagggcctctccgggagcggggaggagctggcccacctccacaaccttctccggcaggccgacggcgagcccctgcgcgcccactccgccgccctcctccccttcctcgcccagctccacccgagcgcccactccctcggcttcctctacctcctgtgagtcccgtccccttgatgccgccgtccgcgaaaaccctaatcccgtatgctcgccgaatccaatccgtcgcgctaatctacttttcccccaccttgcggggggttgtttcgtccgtgatgcagggaggcgttcgcgtcttcggcttccaacctgagggcgcagggcggcggggacttcctggtcaccacggccgatttcctcgtctcctgctcggcggagcagatacgcttggcgcctgataagtgtgcgtgctgttcaatgatcaaatcgaatctatctaattctgtcatgcatcgattattcgttactagtactagaacattattcgtggactaaacattccacctttttttttcttcgatttgtattttgtatgtgcagttctgagtgtgtgtagggtgttcaagaatgaggtcatgcagctcaacgcgccgattagagggattgcccctctgcgggcggcaatccgcaagattcagacttcgtctgaagagctgaccccgatccatgcggattaccttctcctgtgcctgcttgcgaagcagtacaaggctggcctaagcgtcctggaagacgacatactcgaagttgatcagccaaaggacttattcctctattgctactatgggtatatggacgaatgtgctttatcctttatggttttttaatatgtaccgtttgtttacttaacggttttccttctcttgcaggggaatgatatacattgggctgaagaagttcactatagcactggattttcttcacaatgtgaggctttaaacatgttaattttgtgtttgatgtttaatggttcagtgtttacaatgttatgcatttttacaggctgttaccgtcccaatgtcatcattgaatgctattgctgttgaagcttacaagaaatacatcctagtttcgctcattcagaatgggcaggtatgttcaccacttcctgctttgcgtcctctgctgctttagtgtgtggaattgtgggacttttagggaaagcttgtttttccttagctttgaccagcgatctggtgctctctaattgatatacaccagctctggctaagataagatttgtggtaaaacatatgtgatatatggttgagaaattcagataccattgctagataaaggtgagtctatatttatggtaagcttgtgaaacaaagtataatgcatgtaatgataggaacatgtacacaggtgatgaaagataagtttagtcaacctctaattccaagctaattgggtactgtcctttttcctgtgttaatgggataataggctggatgcctaggtttgcatccgctgaattgtgatcacaatcttagtgttgccatctttaattggtccaatattttgggctctcaaatgaaaacaactacggttttgtaaatgggttaaaaattggcagcagaaaagcagtatggtacccaactcatagggatccaaatccataagcaggtggtttaaccttgatagacagagatatactactctagttagtttatcactactaaatttctgatcatgcattctcttcccacttcttgtatcaggatatttagttttcccgaaaatgtcgaatttgcacacgtgcactcagctttagcttctggtctttaatgagagctcagatctcctaaaatttgttatgttgatagatcatcctgtggtataagaactgccagttgaactgatgtggtatataatcttcataattgtattatgagctataagctggacatttctacatgtgctcatcaaaagatttattctctccaatttactggttgcccctccatagcaatgctaataggttgttatgttcaatagtttatataaaaaggaggattacaagctgagatttatgccatttaaatgacaggttccatcatttccaaagtacacatcttcaactgctcaaaggaacctcaaaaatcatgctcaggtatattcagggaatcctagtttcatctgtcccatgaaagaatgtatgcttgatagtcgcatgctgtttaatgtaatgctataagtgttagccatgccccatgctttgtctcatcgtttggtttttgatttagtggtttttgattcatttttggcatggtcaatgctttaccttctttttttgttttgctgcatagtttgttctcggtatcaagtacatttgttttactcactagaggcaatgctcacatttttatgttctacgttaccgtctatgccaccctagatataaaggctaaattttgctcttgatgcaagttcatcctttttagtgtttaactgcatacaccctttttaggttgcttctgaagtcattagtgctctgcgctgttcttttatttcaggtttatgttgacctgtcaacatgctacagcaaaggtaactactctgaattagaggagtatatccagctgaatgctgagaagtttcaatcggtgagtatttcctttgtcagttgcttgagctgccctccttactatatctatttccttatcaggaactgtacttaagttgctatctacttgacgtgctacgcattattttgttgacagttctgcatggcaaacccatttgtagatttatctgaaccacctccttcctttcctctgttttttttttctttttcaggacaacaaccttggacttgtgaagcaagtgctctcctcaatgtacaagcgaaacatccagaggttgacacagacctacttgactctttcgcttgaggatattgccagctctgttcaacttaaaaccccgaaggaggctgagatgcatgtgcttaggatggtaggtgttttttgccccatacagtctgatcacattatctgtactatcacatatttttactttttgccaatccagattgaagatggtgagatccatgcaaccataaaccagaaggatgggatggtcagctttcatgaagatcctgagcaatataaaagctgtgagatggttgagcatattgactcgtctattcaaaggtatgtgtcttctgtttaccactcttgactgctacgtatatcttgggcatgtacgcaaggtgccaagagaagagaatcaaggacccttcgtgctgctcttcagctcttggcacattgcatgtagctttcacttacaaaaatcgtatctagtacaatatgcaaccttatgattttggagaacttcactgaggtatatcatggccagagggcaaccttgtttgttttcatactcagtttctgagtttactcttagttaaattggtggcgtactggctgttttttttagataatggaaaattttacattgccggcacactaggtgcacacagcctaatttttcaaataaatctaaagaagcataacagtaaaacagaaaagagaagggaataaagcaaaagaaaagaagctaccaataacttagtcagcataactgcatatccttctaatagtgcgccacccctaagctgagttggaaattaatatgaatgaaacattaatcgtttttgagttgtatcagatgattcagtctcaaaacatatgtatgtcaggttgatggctttgtccaagaagctgtcttctattgatgagaacatctcgtgcgatcctgcatatttaatgaaggttagctcagattttcatcagaaaggtttcagctttttttttttcgttgtcactgcccactgtttcctaagtttatggatttgatgcagactggaagagagcgtggtggaagattcgattacgatgacttcgactcagttccgcacaaatatttttgagacgacctctgcattatgtgactcgaggtagtacattagtcaaactagttgttctcatgattgccagtttgatccgtacattccgcccatcaaaatttaaaccctgtaaattctggcgttaaagaatggtgcttttgaaccagagactgaatcagttggtagtttattcaatcagctatcctcttggatgcattttgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0119000, RefSeq:Os08g0119000