Difference between revisions of "Os08g0245200"
(Created page with "{{JaponicaGene|
GeneName = Os08g0245200|
Description = Similar to 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1)|
Version = NM_001067888.1 GI:...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0245200| | GeneName = Os08g0245200| | ||
Revision as of 20:46, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0245200 |
|---|---|
| Description |
Similar to 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) |
| Version |
NM_001067888.1 GI:115475512 GeneID:4345054 |
| Length |
4684 bp |
| Definition |
Oryza sativa Japonica Group Os08g0245200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:8873183..8877866 |
| Sequence Coding Region |
8873233..8874285,8875234..8875432,8876847..8877060,8877201..8877306,8877424..8877546 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:8873183..8877866 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:8873183..8877866 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggtccatggagcagcagcagccggagtcggcggcgccggcgacggaggcgtcgccggagatcatcttccggtcgaagctgcaagacatcgccatcaccaacaccctcccgctccaccgctactgcttcgagcggctcccggaggtggcggcgcgcccatgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcccgccgcctcgccgccgcgctccgccgcgcgccgctggggctccggcggggcggcgtcgtgatgagcctgctgcggaactcgccggagttcgtgctgtccttcttcgccgcgtcgcgcgtcggcgccgcggtgaccacggcgaacccaatgtccaccccgcacgagatcgagagccagctcgccgccgccggcgccaccgtcgtcatcaccgagtccatggccgccgacaagctcccctcccactcccacggcgccctcaccgtcgtcctcatcgacgagcgccgcgacggctgcctccacttctgggacgacctcatgtcggaggacgaagcgtcgccgctcgccggcgacgaggacgacgagaaggtgttcgacccggacgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgctaacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaacccaaacatcgggctccacgccggcgacgtgatcctgtgcgcgctgcccatgttccacatctactcgctcaacaccatcatgatgtgcggcctccgcgtcggcgccgccatcgtcgtcatgcgccgcttcgacctcgccgccatgatggacctcgtcgagcgccaccgcgtcaccatcgcgccgctcgtgccgcccatcgtcgtggccgtggccaagagcgaggcggcggcggcgcgagacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaaggacatcgaggacgcgttcatggccaagctccccggcgccgtgctcggacaggggtatggaatgactgaggcagggccagtgctgtcaatgtgcctagcattcgccaaggagcccttcaaggtgaagtccggtgcgtgcgggacggtggtgcgcaacgccgagctgaagatcatcgaccccgacaccgggaagtcgcttggccggaacctgcccggcgagatctgcatcagggggcaacagatcatgaaaggttacctgaacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcacaccggcgacatcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaaggagatcatcaaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatcacccatccaagcattgctgatgctgctgttgttgggaaacaaattgagcctgaaatcggagaaataccagtcgccttcgtggcgaaaaccgaagggagtgagctgagtgaagatgatgtcaaacaattcgtagcaaaggaggtgatctactacaagaagatccgggaggtcttcttcgttgacaaaatccccaaggcgccgtcagggaagatcctgagaaaggaactgaggaagcagctgcaacatcttcaacaagaagcttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MGSMEQQQPESAAPATEASPEIIFRSKLQDIAITNTLPLHRYCF ERLPEVAARPCLIDGATGGVLTYADVDRLSRRLAAALRRAPLGLRRGGVVMSLLRNSP EFVLSFFAASRVGAAVTTANPMSTPHEIESQLAAAGATVVITESMAADKLPSHSHGAL TVVLIDERRDGCLHFWDDLMSEDEASPLAGDEDDEKVFDPDDVVALPYSSGTTGLPKG VMLTHRSLSTSVAQQVDGENPNIGLHAGDVILCALPMFHIYSLNTIMMCGLRVGAAIV VMRRFDLAAMMDLVERHRVTIAPLVPPIVVAVAKSEAAAARDLSSVRMVLSGAAPMGK DIEDAFMAKLPGAVLGQGYGMTEAGPVLSMCLAFAKEPFKVKSGACGTVVRNAELKII DPDTGKSLGRNLPGEICIRGQQIMKGYLNNPEATKNTIDAEGWLHTGDIGYVDDDDEI FIVDRLKEIIKYRGFQVAPAELEALLITHPSIADAAVVGKQIEPEIGEIPVAFVAKTE GSELSEDDVKQFVAKEVIYYKKIREVFFVDKIPKAPSGKILRKELRKQLQHLQQEA</aaseq> |
| Gene Sequence |
<dnaseqindica>51..1103#2052..2250#3665..3878#4019..4124#4242..4364#agaagcccaaaacacacgaagcaaagctgcctcgtctgtgtcactgacagatggggtccatggagcagcagcagccggagtcggcggcgccggcgacggaggcgtcgccggagatcatcttccggtcgaagctgcaagacatcgccatcaccaacaccctcccgctccaccgctactgcttcgagcggctcccggaggtggcggcgcgcccatgcctcatcgacggagccaccggcggcgtgctcacctacgccgacgtcgaccgcctgtcccgccgcctcgccgccgcgctccgccgcgcgccgctggggctccggcggggcggcgtcgtgatgagcctgctgcggaactcgccggagttcgtgctgtccttcttcgccgcgtcgcgcgtcggcgccgcggtgaccacggcgaacccaatgtccaccccgcacgagatcgagagccagctcgccgccgccggcgccaccgtcgtcatcaccgagtccatggccgccgacaagctcccctcccactcccacggcgccctcaccgtcgtcctcatcgacgagcgccgcgacggctgcctccacttctgggacgacctcatgtcggaggacgaagcgtcgccgctcgccggcgacgaggacgacgagaaggtgttcgacccggacgacgtggtggcgctgccgtactcgtcggggacgacgggtctccccaagggggtgatgctaacgcaccggagcctgagcacgagcgtggcgcagcaggtcgacggcgagaacccaaacatcgggctccacgccggcgacgtgatcctgtgcgcgctgcccatgttccacatctactcgctcaacaccatcatgatgtgcggcctccgcgtcggcgccgccatcgtcgtcatgcgccgcttcgacctcgccgccatgatggacctcgtcgagcgccaccgcgtcaccatcgcgccgctcgtgccgcccatcgtcgtggccgtggccaagagcgaggcggcggcggcgcgagacctctcgtcggtgcggatggtgctctccggcgcggcgcccatgggcaaggacatcgaggacgcgttcatggccaagctccccggcgccgtgctcggacaggtacaatacaagaaaaatattttcctttttttggttgaattggttgtcattttttgtgcgccgttggatcatccgatgggcggctcggattccatgttgactttggcgtctgacggtcaacgtgtaatctgagccctccatttggctggtgtacagatccaatggcgggaaatcttaacgtgtgaaggactcaagaagcccttcttttcacgtttttatttaggttttgatacaatatatacgcaataggtgttgttttttaaaaaaaataaacaaaatggacattacattattggctgtgtttagatccaaaatttagatccaaacttcaatccttttccatcacatcaacctgtcatacacacacaacttttcagtcacatcatctccaatttcaaccaaaatccaaactttggatccaactaaacacaaccattgttattattattattataaacttataaaaaggacatgaaaacaattaatgaaactaaggacagatttcatttcactgacatgcttagaaagtatagttgccaatatatgttatctttttaatgcgtgtgtgtgtgtgtgtaaagtggagctccactcccacacacaaacatgatggcatgactatttaataagctaagttggctcaagtcaacatctgaggccaataatatctttctagctagtttttcttttaaaaaaaatcctagctaactgatatgatataaaattagcttgccatttactcaaaagaaaagaagtattcttattccccaatgcaataacatggtagtattattttaaatcccacatacatagcactaaattcacctttggtttgttctatatgacatagatatcaaattagtcctacaaaaatgttatattctaagcatgtccagctaattaagcaaatgtggtgatgatctttgctgcccactatgtggcattcaggggtatggaatgactgaggcagggccagtgctgtcaatgtgcctagcattcgccaaggagcccttcaaggtgaagtccggtgcgtgcgggacggtggtgcgcaacgccgagctgaagatcatcgaccccgacaccgggaagtcgcttggccggaacctgcccggcgagatctgcatcagggggcaacagatcatgaaaggtacagaagatccctgaacatcttggcatgttcaactgttgacttctcagttatgttttgcccctgcaatagagaatgtactacactaccactggcccagatctctagatcaaatctgacttggaaaacatatgataatcaccagtggataaccagctacacaaaaaattatactacaagccattgatctggatttctttttgactattattaaacctgaattatgacaagtagttgtctggagatgatgtgcaataaaacaaggtcaaaaatatggatggccctctctttctaatggaagtaaaagaaagtgttgctttggagaaatgataatacatgttgtagtgttgcttttttatagggtcattgtgcaagaagtccacagtaggtaggatattgtaatcctaattgagtagatgctccagctagcgaattatgttgatgcaactttgatgtcaagatctcaactagcgtgcactggcatgtcacatatccgatgccgttggttcaaatcattcctagcaattccatcgcgctattaatgttcgcctcccatctttcgccctataactttataagccatagctgaaattaaaattttgaaaattaattttggagttaattttgttttttatgtagtttctttcctagtattggtttttcaattgctaatggcataaatataaaagtttcactcataaattaaaacgggttatcagctctaggccaaacggtagcgctgttgccaaacgatatcaatggaattatgcgagttcttaaggccgtattcacaattataggtcttttttttttaggacacaattataggtctaacagagtaaggatgttgctgttcgtcattgtattagagcggaaggtctgaaaggctgaaacaatcaaacaattgttgtttaatttccacactactaatatatggcgtccaagacctgggtaaagtttagaaaatgagagatgtcaaatttgtcactttcagttgcatcactgcaaatgtactattaaatatatatcagtagctaatagtaatttttcaagttgcagtttaaatgcaaatattcccagcccaagtgactcgcattcaaaaaagaaacagtgacagtgacaacgaaaggtccttggaataatatcagaactgaaattttatagcctcatcgtctcgcttatactcataagggacatggctcattagtgatttaaaactagtttgtgggtatatgtgttcttagtgactaaaaacaaatgctaaaaaataaattacgatgaaaaaaccataaaattaaattttaaattttaaatttttcgcttatgcttatgagtgatcacctgtatctaaccacctattcgttgtactaatttccatgaaaattaacatgctaaaaaaaccgttatttttcaggttacctgaacaacccagaggccacgaagaacaccattgatgcagaagggtggctgcacaccggcgacatcggctacgtcgacgacgacgacgagatcttcatcgtggataggctcaaggagatcatcaaatacaggggcttccaggtagcccctgcagagctggaggcccttctcatcacccatccaagcattgctgatgctgctgttgttgggtatgtctttaactagctcctgttctgaaaatgtagtaaggtttaatttgcttgatagataatgttgcagagttttgacatggatttgaatgaatcagttcttgaaatggcgttttcatgatatgattggccacttgcaggaaacaaattgagcctgaaatcggagaaataccagtcgccttcgtggcgaaaaccgaagggagtgagctgagtgaagatgatgtcaaacaattcgtagcaaaggaggtaaattcctttaccatggttattcataggacaaaaagagaacactttaccatggctgagtattgtttttttttttacttttccttcattaaattattcatttatatgtggttttaggtgatctactacaagaagatccgggaggtcttcttcgttgacaaaatccccaaggcgccgtcagggaagatcctgagaaaggaactgaggaagcagctgcaacatcttcaacaagaagcttaatttacaaccggcctcagacatgaaaagaatttagcatgaacaagcaagttccatgattctaatgttgcaaattacacattctgttctgaatagtttgtgtcttccatttatatgtgatgggggaaaaaaacccaggtacaaatggattctgtgcaatacaaagggtggtgttaccgtgttaggtcggctaggtttgctcatttgcagagagacaggacactggggaagccatgtacaaaaatgttcagacctgtttattgttcttgctggtgtctttgtaatattttgtttaaacatttatatcattcattattattgtt</dnaseqindica> |
| External Link(s) |
