Difference between revisions of "Os08g0266700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0266700| Description = Rad21/Rec8 like protein, N-terminal domain containing protein| Version = NM_001067941.1 GI:115475618 GeneID:4345123| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0266700|
 
GeneName = Os08g0266700|

Revision as of 20:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0266700

Description

Rad21/Rec8 like protein, N-terminal domain containing protein

Version

NM_001067941.1 GI:115475618 GeneID:4345123

Length

5467 bp

Definition

Oryza sativa Japonica Group Os08g0266700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:10159237..10164703

Sequence Coding Region

10159371..10159494,10160847..10161108,10161186..10161232,10161314..10161345,10161426..10161493
,10161561..10161952,10162158..10162356,10162841..10162983,10163069..10163756
,10163840..10163972,10164072..10164170

Expression

GEO Profiles:Os08g0266700

Genome Context

<gbrowseImage1> name=NC_008401:10159237..10164703 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:10159237..10164703 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttctactcgcacacgatccttgcgcggaagagcccactgggcacggtgtggatcgccgcccacctcgagcgcaagatcaagaagccgcagatcgacggcatcgacatcccctcctacgccgaatttatcatgttccctgaagttccaattgctctgaggttgtcagggcatcttcttctaggtctagttcgcatttattcatggaaggtaaactacctcttccatgactgtaaccggatgctaagcacaatcagaaccgccttcgcttctgtacaagtagatctgccccttcatgcggatcatgcgccttttgacaccatcacattgcctgatacattccgtcttgatgacataaacctagatgatgcaattcgtctgatagatacgccagataatcatcggaagagtctggaccagatcaccctggctgaaggagactatctgatgattgatcttgatgaggatgctagagtagagctatcagctcctggacaatcttcacacatgggacctgaaccaactgacgaagagagattgcctccatttcacatcgattttgggccaagtgacaatatggatgaggaaatttccgtagatccttcccaaggcaacaactcggaggcagtgaacaccagtaacataaatcaggcagataaagcaccagatttacctgaaataatgcgtgaagcaccatttgagggccctgaacttaacttgccagatattgatgaggtaaacaatgatcccatggatgtgactgaggaatcttcaccatttgtgtccaagaatatcacccctccggcactggaacgaactatatcccctggtcaaggtggattatctgggacatccattcccaatgcacgaggaagtacaagcaccacatatgacaatatagaagatgttataccaatggatattggaatgcctgattttaggattgaaccatctccacctcgagtacaagatgagatgaatgcacaaccagtacaaggtgagataaacgcacaaccagtacaagatgagatgaacgcacaaccagtacaagatgagatgaatgcacacccagcacaagataagaggagaattagatatgacaatgaaatagtgttctccaatgcttatatgaagagacaaattgatggcggtgaactacatcgtctggtcagcaagaggaggaaactgcctcaagcagcggtggatgtgtggaaattcaacaggattcgccaaaaggatggtttcttgcttgatcctttggtccatgggatgtgcgctaccctacgtcaaacctacgagagaaccttcccccatgtgattgaccctgaagctgagtcaggatctgtcgagcatactcctggggtagctaatgacagtattcaggatacacatgatcatcaactctccccgaagtctcctggaaacacagatgcacaacctgaacatcagttcaatcaacaagctccaagaaattcagatggacaacctgaacctgagcttaacccaaagtctcctgtaaatgcagaggcacaacctgaatctcagattaatccacaatctccaagaaatgcggatggacagcctgaacctgagctcaacccaaagtctccaggcgaagcaggcacgtcacactttgatgatatgcctgagatccctcgattctcgccacaaaatattccatctccaataagagacgacaattctcctttcaaaactcctggtgctggtggaactccgaaatcaagacttggagaaactcctgcctctgggacaccagcagatatgagttacatgtcacctggacaagactctgatcctcaagtttctccttttccatttaatgatgaacttgatggagatttgcccgagattcctagcctcatgagtactcctggagtaatatctaccgcaggtactggcaccacaggattgggaagcatgtctgctaggacaagggctgtggcacagtacttcaaagatcaaatggcttcggctacatcagatgaccaacctggtaaatttatcttgaacagaatcttggaagggagacacaggaaacaagctgcacgcatgttttttgaaacactggttctaaagagttatgattatattgatgttgaacaagaagcagcctatggtgatatagcagtttcagttaaaccctcactctcaggagccaaattttga</cdnaseq>

Protein Sequence

<aaseq>MFYSHTILARKSPLGTVWIAAHLERKIKKPQIDGIDIPSYAEFI MFPEVPIALRLSGHLLLGLVRIYSWKVNYLFHDCNRMLSTIRTAFASVQVDLPLHADH APFDTITLPDTFRLDDINLDDAIRLIDTPDNHRKSLDQITLAEGDYLMIDLDEDARVE LSAPGQSSHMGPEPTDEERLPPFHIDFGPSDNMDEEISVDPSQGNNSEAVNTSNINQA DKAPDLPEIMREAPFEGPELNLPDIDEVNNDPMDVTEESSPFVSKNITPPALERTISP GQGGLSGTSIPNARGSTSTTYDNIEDVIPMDIGMPDFRIEPSPPRVQDEMNAQPVQGE INAQPVQDEMNAQPVQDEMNAHPAQDKRRIRYDNEIVFSNAYMKRQIDGGELHRLVSK RRKLPQAAVDVWKFNRIRQKDGFLLDPLVHGMCATLRQTYERTFPHVIDPEAESGSVE HTPGVANDSIQDTHDHQLSPKSPGNTDAQPEHQFNQQAPRNSDGQPEPELNPKSPVNA EAQPESQINPQSPRNADGQPEPELNPKSPGEAGTSHFDDMPEIPRFSPQNIPSPIRDD NSPFKTPGAGGTPKSRLGETPASGTPADMSYMSPGQDSDPQVSPFPFNDELDGDLPEI PSLMSTPGVISTAGTGTTGLGSMSARTRAVAQYFKDQMASATSDDQPGKFILNRILEG RHRKQAARMFFETLVLKSYDYIDVEQEAAYGDIAVSVKPSLSGAKF</aaseq>

Gene Sequence

<dnaseqindica>135..258#1611..1872#1950..1996#2078..2109#2190..2257#2325..2716#2922..3120#3605..3747#3833..4520#4604..4736#4836..4934#ccccccccaaatctcatctcatctcatccccctcccctccctctccgtgcgccgccaccaccaccgccaccgccgccgccgcaggagcaaccccgaggagacggaggagggaggaggcagccgacgccgccgcgatgttctactcgcacacgatccttgcgcggaagagcccactgggcacggtgtggatcgccgcccacctcgagcgcaagatcaagaagccgcagatcgacggcatcgacatcccctcctacgccggtaagccctcccctcccctctctcccaaagacgcgctctttcttttcccctttgttgttgctgcgcgggtagaaaggcggcgcctttcagcggcggcgggggtagaaaggataagcttttttttttttttggttcctccgtgcaactgggatttgttccggagttgtgagtgaaaaatgttttggggttagcaatggggtcaagtgatggtacagagatttggatcccaatctgcattctgcaatttgggacaggaaggaagaaggtttggatagttttttttagagcattttgctaggggttcgcagtatttatctggttatcagttagaatttcgtgtaaatgattgttctagtggcatgattattcattaatgacaaaagatacaacaaaatttggtcttttagttatgggaggttgtggtggggtgtgcaccggagacttttgggtggatttttgcaggccctatttggatgctaaacatttcaagaatgacagcatttgcatatccagaaggaagaaaaaaaaaagaacgaccaaacccaattttttacctcccagtacagtataatcacttgcggtggaacactgcctacttgagccactctatttgaagagtaattcatatatgtttgttctacttatatgaattacacaaataagtttatatgttatccagtcaaatcatagaacattgacaaataaactggcttgttgtgcttgcattgttcttttagtacattatgtaacagtttttactttattctgtgattaactttacatatttaaccttgcaaactcaagaacaaagtagataagccttatgtttaggaagcttactgatggaattttattagaacaaaacatgttttttgactggaagtaaaacaactggattaatattgcatatttgggcatagatgtctatactctatgggaagttttttttattctctttgggaggaaagtgtgacaattttttttatttcaacttcgaactgtgctttgcaagaacttgtattataatggcatgctgaataggtcacatttttctgcaggtcgcttacccttggcaattagtttgtgtttgcttagtgaggtcatgtgtcgcccttaggtgttgtgcacgtgagcgtgttcttgggtgtgtttgtcagtttaacctcctctttttctatctattttcttcttaaagaaatgaagttcagtcctcccgcatttttgagaaaaataggttacatattttccttagttaagtattgaacaattttctcatatacattgaattttccctatgctttactctgcaacctaatgccatgtcttctaatgcatgagttttattttttcagaatttatcatgttccctgaagttccaattgctctgaggttgtcagggcatcttcttctaggtctagttcgcatttattcatggaaggtaaactacctcttccatgactgtaaccggatgctaagcacaatcagaaccgccttcgcttctgtacaagtagatctgccccttcatgcggatcatgcgccttttgacaccatcacattgcctgatacattccgtcttgatgacataaacctagatgatgcaattcgtctgatagagtgagtacttttcttctcatatattttctccgcgtcatacaacctcaactaatattattgtgttaactttctgacagtacgccagataatcatcggaagagtctggaccagatcaccctggctggtatacgaagttcaattagtcaatatatgtattattatcattccaatgcggatgcttaatgatttcattttggtgctgcagaaggagactatctgatgattgatcttgatgaggtattcctcactgacttgcgctttttgcaggcttgtttagtttgcatgttttttaatatttgtgcttataaattgtgtaggatgctagagtagagctatcagctcctggacaatcttcacacatgggacctgaaccaactgacgaagagtacgtgtcatgttttttttccttctaatttctattttggtggactcatgtccgctttgcttatcaggagattgcctccatttcacatcgattttgggccaagtgacaatatggatgaggaaatttccgtagatccttcccaaggcaacaactcggaggcagtgaacaccagtaacataaatcaggcagataaagcaccagatttacctgaaataatgcgtgaagcaccatttgagggccctgaacttaacttgccagatattgatgaggtaaacaatgatcccatggatgtgactgaggaatcttcaccatttgtgtccaagaatatcacccctccggcactggaacgaactatatcccctggtcaaggtggattatctgggacatccattcccaatgcacgaggaagtacaagcaccacatatgacaatatagaagatgttataccaatggatattggttagtattttgcttgttgactcatcttgttctttccagttttgttttctgccttcattttttcataagacctaatagaaataagactacattgcaattccaccagcattacttatgtgggatgctagaatgttgtgtaaaatgtactttcccttgatgttaaacatgtcttctcatccaagttcttttccttctgtgattttaggaatgcctgattttaggattgaaccatctccacctcgagtacaagatgagatgaatgcacaaccagtacaaggtgagataaacgcacaaccagtacaagatgagatgaacgcacaaccagtacaagatgagatgaatgcacacccagcacaagataagaggagaattagatatgacaatgaaatagtgttctccaatgcgtaagttcgactttacaaattatcttcttaagcaaagttcattggtggaaataacctcaaattaaatattatatgtttaccaggacttcgatgaatttttgaaattcatattgtactatgtcttgcctgggcgttttgtttaaaatctaccaaatgacatcttcatttctaccatgtcctgtctcctctgatcctattactctgtcccctcacctacaccacccttcgaatattgtttttctaaacagcttatctataaatagaataattctatgtgtgctgttatcaaccggtaattaactcgtctaataattttgatatatttgtatgggatttgttctgttcaaaaatacaagtcaggctatgaactttttaccatcgtagtgctaggtgtgatggggattaattgcaacaacagtatgatatctggtggtactatactgtattagttacaaatgataagacctcatactctcttgcacagttatatgaagagacaaattgatggcggtgaactacatcgtctggtcagcaagaggaggaaactgcctcaagcagcggtggatgtgtggaaattcaacaggattcgccaaaaggatggtttcttgcttgatcctttggtccatggtaagctaccatactctctgattccactagtgatggtcctttcacttctgaaacaatgtcagctcaaatttgctcttcctttcagggatgtgcgctaccctacgtcaaacctacgagagaaccttcccccatgtgattgaccctgaagctgagtcaggatctgtcgagcatactcctggggtagctaatgacagtattcaggatacacatgatcatcaactctccccgaagtctcctggaaacacagatgcacaacctgaacatcagttcaatcaacaagctccaagaaattcagatggacaacctgaacctgagcttaacccaaagtctcctgtaaatgcagaggcacaacctgaatctcagattaatccacaatctccaagaaatgcggatggacagcctgaacctgagctcaacccaaagtctccaggcgaagcaggcacgtcacactttgatgatatgcctgagatccctcgattctcgccacaaaatattccatctccaataagagacgacaattctcctttcaaaactcctggtgctggtggaactccgaaatcaagacttggagaaactcctgcctctgggacaccagcagatatgagttacatgtcacctggacaagactctgatcctcaagtttctccttttccatttaatgatgaacttgatggagatttgcccgagattcctagcctcatgagtactcctggagtaatatctaccgcaggtactggcaccacaggattgggaagcatgtctgctaggacaaggtatgggataagttccaatagacgatttcattatatgttaccatttgagtgtgaattctgacatgtttcatactgcattgtagggctgtggcacagtacttcaaagatcaaatggcttcggctacatcagatgaccaacctggtaaatttatcttgaacagaatcttggaagggagacacaggaaacaagctgcacgcatgttttttgaaacactggtaccatttaaactgcaagttacatttcccttttggacataatttgtagtcactttccacactatgtcttgacatatcgtatgtttgttctttctgtaggttctaaagagttatgattatattgatgttgaacaagaagcagcctatggtgatatagcagtttcagttaaaccctcactctcaggagccaaattttgaccaattcagttgcttagaaccacatataatctcatttgatccgcgggaaggagctttggtgggatttgcagaaatggcctgaacaatggattcttatatgcgacatggctggctaatctactgcaatttgctggactccaattactagaacaagtaggcactccatgccatttaggtttatgttgcagaatactgtagttgtaaagctgtagcattagtagttgtcgaaagccaatacatcttgtccagttaggacttcagatggtagtccttgcctatgctttcttggcagaaagcaaagtgaacaaggaatcagatgaagataagaatttttcttacttttgctgtttaattacatggtagtgatatgttaaatacaagtcgaaaaatgttggatgactagcataagacaattttataaatgtcagtgtacatagtctgatatcttcagtgtgccagagcgcagagtctgttcagaaaattttcatgcaatatgtgttctgcaatgcaccattatttgttgtatttgtctg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0266700, RefSeq:Os08g0266700