Difference between revisions of "Os08g0322500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0322500| Description = Leucine rich repeat, N-terminal domain containing protein| Version = NM_001068073.2 GI:297608404 GeneID:4345267| Len...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0322500|
 
GeneName = Os08g0322500|

Revision as of 20:48, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0322500

Description

Leucine rich repeat, N-terminal domain containing protein

Version

NM_001068073.2 GI:297608404 GeneID:4345267

Length

2342 bp

Definition

Oryza sativa Japonica Group Os08g0322500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14144075..14146416

Sequence Coding Region

14144075..14144120,14144207..14146416

Expression

GEO Profiles:Os08g0322500

Genome Context

<gbrowseImage1> name=NC_008401:14144075..14146416 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14144075..14146416 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttttaccagatgctcgctgccattctccaagcacttcttatagctcagatgattcatgggcaaagcgataaggaagttcttgttcagctcaagaacttcctgcaggtgcaaaacccgataaaccacggcgcttacgtcagctggtcggagtcagaggcctcgccgtgccattggaaaggtgttgggtgtgatgatgccgggcatgtgaattccctcgatctttcgaactcaaacatcgcaggtccattattcagaaacttctcacgcatcatgcggcttacccacctaaacctttcatcaaacagcatcactggtgaactccaggatgatctcaaacaatgccagagtctccagcacctcaacatatccaacaacctcattggtggcatccttgatttgtccagcctgaccaaccttcagacactagacgtatcccaaaatcggtttcagggaaggatagacagaaacttcccgggaatatgcggcaacctcactttcctcagtgtctccagcaacagcttcacaggcaggatagataaactatttgacggctgcccaaagctcaagcatgttgatctcagctggaacggcttcaccggcatggtctggccaggcattgaaaggcttagacagttcaaggccaacaacaacaacctcacagggagaatttctcctggcatgttcacagaagggtgcaaattgcgctcactgaacattgctatcaactcattgcacggtagctttccaagctccattggcaattgctctaacatgaaattcctttcactatgggaaaacagcttttatggatctataccaccaggaattggttcgattgcacggcttgaggagctggtccttgcaagcaacagctttgatggaattattccaatggagctgacaaactgtaccaacctgaaatatttggacatcagtgacaacaattttggtggagaggtgcaggatgtctttgggaaactaacatgcatgaggagtctgttactccaagagaacaactatactggtggcattacctcatccgggattctccagttgccgaatctaattgtgcttgacctatgctacaaccaattctccggtgatttacccagtgaaatcagcagcatgaagaatctcaaggttctcatgcttgctgaaaacaacttctctggtaaaataccaccaacatatggtcagcttctcaggctccaagtattggacttgtccttcaacagtctttctggtgagattccaccagacattggtaacctatcatcacttctccttttgatacttgctgggaaccaaatttcaggtgagatcccaagggagataggaaattgtaccagcttagtttggcttaaccttgctggaaaccagctaatggggcaaatcccaccagagatggcaaatatagggagcaatccaagcccaacattcatggagaatcgaaagaacccagaacttttggaatctatcaccagcaaatgtgtcgctgtagagtggcttccatcaagttatccagaattcaactttgttcagtccctgatgatgtctcagaagaactgccaaaccatatggaatcgactcgccatggggtatgacgtacttccaatatcttcaccactgcgaacagcattaggatatgttcagttgtcaggaaatctgctgtctggagagataccatctgctattggtacaatgaagaacttcagtttgctccttcttgatggaaaccgactctctggacacctaccagcagagattggtcatcttcaacttgttgctttgaatatctcaagcaattttatttctggtgaaattccctctgagattggtcatatggtaacacttgaaagccttgatctgtcaagtaataacttctctggtgcactcccatcaaaccttaaccaactcactaaactgagtaggttcaatttgtcatacaatccgcttctctcagggaatgttccaagcagtgggcagctctccacctttgatgagcaatcttttctgggagatccactgttgtctttgaatgtaacagcaggttccagttctgattctagtccaagggagttctcatcatctgacacagaggagcatcctacaaacgaagagatcatggtgacaacaattgcattccttgcattcttttcagtcacattgcttaccagagaatttcatatcttcatgtacttgtacttcacagcatcacggaaaattgccaactgtaggattatttgcacctga</cdnaseq>

Protein Sequence

<aaseq>MFYQMLAAILQALLIAQMIHGQSDKEVLVQLKNFLQVQNPINHG AYVSWSESEASPCHWKGVGCDDAGHVNSLDLSNSNIAGPLFRNFSRIMRLTHLNLSSN SITGELQDDLKQCQSLQHLNISNNLIGGILDLSSLTNLQTLDVSQNRFQGRIDRNFPG ICGNLTFLSVSSNSFTGRIDKLFDGCPKLKHVDLSWNGFTGMVWPGIERLRQFKANNN NLTGRISPGMFTEGCKLRSLNIAINSLHGSFPSSIGNCSNMKFLSLWENSFYGSIPPG IGSIARLEELVLASNSFDGIIPMELTNCTNLKYLDISDNNFGGEVQDVFGKLTCMRSL LLQENNYTGGITSSGILQLPNLIVLDLCYNQFSGDLPSEISSMKNLKVLMLAENNFSG KIPPTYGQLLRLQVLDLSFNSLSGEIPPDIGNLSSLLLLILAGNQISGEIPREIGNCT SLVWLNLAGNQLMGQIPPEMANIGSNPSPTFMENRKNPELLESITSKCVAVEWLPSSY PEFNFVQSLMMSQKNCQTIWNRLAMGYDVLPISSPLRTALGYVQLSGNLLSGEIPSAI GTMKNFSLLLLDGNRLSGHLPAEIGHLQLVALNISSNFISGEIPSEIGHMVTLESLDL SSNNFSGALPSNLNQLTKLSRFNLSYNPLLSGNVPSSGQLSTFDEQSFLGDPLLSLNV TAGSSSDSSPREFSSSDTEEHPTNEEIMVTTIAFLAFFSVTLLTREFHIFMYLYFTAS RKIANCRIICT</aaseq>

Gene Sequence

<dnaseqindica>1..46#133..2342#atgttttaccagatgctcgctgccattctccaagcacttcttataggtacgtatgctggctgcaacatatgttcaccattattatcatcaccatttttctctttctgaaattgcctgtgacatgctacacagctcagatgattcatgggcaaagcgataaggaagttcttgttcagctcaagaacttcctgcaggtgcaaaacccgataaaccacggcgcttacgtcagctggtcggagtcagaggcctcgccgtgccattggaaaggtgttgggtgtgatgatgccgggcatgtgaattccctcgatctttcgaactcaaacatcgcaggtccattattcagaaacttctcacgcatcatgcggcttacccacctaaacctttcatcaaacagcatcactggtgaactccaggatgatctcaaacaatgccagagtctccagcacctcaacatatccaacaacctcattggtggcatccttgatttgtccagcctgaccaaccttcagacactagacgtatcccaaaatcggtttcagggaaggatagacagaaacttcccgggaatatgcggcaacctcactttcctcagtgtctccagcaacagcttcacaggcaggatagataaactatttgacggctgcccaaagctcaagcatgttgatctcagctggaacggcttcaccggcatggtctggccaggcattgaaaggcttagacagttcaaggccaacaacaacaacctcacagggagaatttctcctggcatgttcacagaagggtgcaaattgcgctcactgaacattgctatcaactcattgcacggtagctttccaagctccattggcaattgctctaacatgaaattcctttcactatgggaaaacagcttttatggatctataccaccaggaattggttcgattgcacggcttgaggagctggtccttgcaagcaacagctttgatggaattattccaatggagctgacaaactgtaccaacctgaaatatttggacatcagtgacaacaattttggtggagaggtgcaggatgtctttgggaaactaacatgcatgaggagtctgttactccaagagaacaactatactggtggcattacctcatccgggattctccagttgccgaatctaattgtgcttgacctatgctacaaccaattctccggtgatttacccagtgaaatcagcagcatgaagaatctcaaggttctcatgcttgctgaaaacaacttctctggtaaaataccaccaacatatggtcagcttctcaggctccaagtattggacttgtccttcaacagtctttctggtgagattccaccagacattggtaacctatcatcacttctccttttgatacttgctgggaaccaaatttcaggtgagatcccaagggagataggaaattgtaccagcttagtttggcttaaccttgctggaaaccagctaatggggcaaatcccaccagagatggcaaatatagggagcaatccaagcccaacattcatggagaatcgaaagaacccagaacttttggaatctatcaccagcaaatgtgtcgctgtagagtggcttccatcaagttatccagaattcaactttgttcagtccctgatgatgtctcagaagaactgccaaaccatatggaatcgactcgccatggggtatgacgtacttccaatatcttcaccactgcgaacagcattaggatatgttcagttgtcaggaaatctgctgtctggagagataccatctgctattggtacaatgaagaacttcagtttgctccttcttgatggaaaccgactctctggacacctaccagcagagattggtcatcttcaacttgttgctttgaatatctcaagcaattttatttctggtgaaattccctctgagattggtcatatggtaacacttgaaagccttgatctgtcaagtaataacttctctggtgcactcccatcaaaccttaaccaactcactaaactgagtaggttcaatttgtcatacaatccgcttctctcagggaatgttccaagcagtgggcagctctccacctttgatgagcaatcttttctgggagatccactgttgtctttgaatgtaacagcaggttccagttctgattctagtccaagggagttctcatcatctgacacagaggagcatcctacaaacgaagagatcatggtgacaacaattgcattccttgcattcttttcagtcacattgcttaccagagaatttcatatcttcatgtacttgtacttcacagcatcacggaaaattgccaactgtaggattatttgcacctga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0322500, RefSeq:Os08g0322500