Difference between revisions of "Os08g0398350"
(Created page with "{{JaponicaGene|
GeneName = Os08g0398350|
Description = ABC transporter related domain containing protein|
Version = NM_001188636.1 GI:297726402 GeneID:9269177|
Length = 65...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0398350| | GeneName = Os08g0398350| | ||
Revision as of 20:49, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0398350 |
|---|---|
| Description |
ABC transporter related domain containing protein |
| Version |
NM_001188636.1 GI:297726402 GeneID:9269177 |
| Length |
6551 bp |
| Definition |
Oryza sativa Japonica Group Os08g0398350, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:19089063..19095613 |
| Sequence Coding Region |
19089063..19089137,19089297..19089693,19090892..19090995,19091110..19091251,19091365..19091484 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:19089063..19095613 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:19089063..19095613 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcggcaggttcttgctccaggttcttcaggcaggtccacgcgctcctcctcaagaacctctctttccagaggaggaacgccaaggcgaacgcggcgatcgcggcgttcccggcgctgctgtgcgtgctgctcgtcacgatccaggccgtcatcgacggcgagctggaccggccgccgttccggtgcggctgcgcctgcgtgcgccgcgacggcggccgcgcgggcgcgggcgcgtgcgcggcgacggagtgcggcgtgcagcactccacggccacgcaggcgctcagctgcgccgtgccggcgccaccgaggtggccggcggtgacgcaggtgccggacgagccgtaccgcgcgctgacgcccgtgcacccggcgaggtgtcgcggcgacggtggcagcggcgcgtcggaggcgccgtgcccggtcgccgtgctcaccaccggccagaaccgccggctgactgaaggccttggaaggggatttttcccagatgtccctccttcatactatcttggtgtgcccaattccaacaattcatcttatattgatgagttatcaaaaatagtccctggtacaagcacattaccagcgcatgtattgttcatagaaccaggatttgtgcccaatagtaccctatatgtgattcaaagaaaatgtatatgggattcgcacaatacttctagaagttctgatgcgatgccaattcaactcgatgtgaagtgcgttcaaggtttatcactgtggtgccggaattcagcggtgatgaatgaccatttgtataagggttataagggtgggaataagaggaggacatcgaacgaatatcttgctggctatgattttcttgatacaagcaagaggaggtttcatgtgtatgtctcatacaactctaccttcagcagggacaatggacaccatcccatgacagttttgcgtgttgcacggttggttaatatggcatccaccgcatatctgaagtttcttcgaggacctaatgtagaaatgcgcctggaatatttgaaagaaatgccaaaagctgcaatgaaaatcaggctagaccttaccacactccttgatgcactattctttacatggacagttcaactcctccttccagtaatgttgacatatcttgtttatgagaagcagcacaatttaagactgatgatgaagatgcatgggctaaaggatggaccttattggatgatatcttacgcctattttttgtccctttcagcagcttatatgatgttcttcgtgatgtttgggtcccttatagggctagatatcttcagattaaatagctacagcatacaatttgtattctattttctatatatcaaccttcagatcgtgctcgcctttctgcttgcgtctttcttctcgtctgtcaagtctgctagtgtaattagttacatttatgtctttggatcaagccttcttggagaagcacttctgcaattgttcattgaagatattacattcccaagaattattctgaatatttattggatactcattaaaaactaccattctacctgtttattagaacaatggcttgtgacaatggagcttgttcccgggttcgccctctaccgaggattttacgagctcgcagagtatgcatttgcaggaaggcaaatgggaaagcctgggatgcaatggagggacttgaatgaccccatcaatgggatgaaagatgttttgcttctaatgtctatagaatggatacttctgcttcctgtggcatttttactggatcatagacctacatggcatccactgttcctctttgggtttatgtcaacaaagcactcttcaccaacaatcataccagacaaagtgaaacagaggtccagaaaggtgtttgctgatatggcaaaacctgatgttttccttgaggatcaggatcacctaccttcaaagtcatgtgactttgtcactgacatgtgggacaaaggcatggtgatttcgaagcgcaaggtggtgaaaaaattgctgaaggaaatggacatgaggaatatgatcatatgccataacctgaagaaggtgtaccctggaaagaatggaaaccctgataagcttgctgttaaaggattgtcgcttgctttgcgcaaaggacagtgttttggaatgcttggtcccaatggggcagggaaaacatccttcatcaacatgatgattggacttgtggcgccaacttatggaactgcctacatacatgggatggatttgaggagagatatgaatgaaatatatgcaaacattggtgtatgtccacagcacgatttgctttgggaaactctgacaggaagagagcatctaatgttctatggccgactgaagaatctcacaggtgctgctctactgaaggcagtgaatgaatccctgaagagtgtaaatctgttccacagcggtttcggcgacaaatcggtgaacaagtacagtggtggcatgaaaagaaggcttagtgtcgccatcgcactgattggcaacccaaaggttgtttacatggacgaaccgagcaccggattggacacgacatcgaggagcaatctctggaatgtcattaagagagcaaagaagaactgcaccatcattctcaccacacattccatggaggaggctgaggagctctgcgaccgcgtcggcatcttcgtcgacggcaatttccagtgcctcggaactccaaaggagctgaaggcgaggtacggcggcgtgcgggcgctgacgataacgacggcggcggggcacgaggaggcggtggaacgcgcggtggcgcggcggtgccccggcgcggcgaaggtgtacggcgtgggcgggacgcagcggttcgaggtgccccggcgaggggcgcggctggacggcgtgctgggcgcggtggaggcggcgcggcgggcggcgccggtggtggcgtggggggtggcggacgcgacgctggaggacgtgttcgtccgggtcgccatggacgcgcgcgccgccgcccacgtcctctcgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAGSCSRFFRQVHALLLKNLSFQRRNAKANAAIAAFPALLCV LLVTIQAVIDGELDRPPFRCGCACVRRDGGRAGAGACAATECGVQHSTATQALSCAVP APPRWPAVTQVPDEPYRALTPVHPARCRGDGGSGASEAPCPVAVLTTGQNRRLTEGLG RGFFPDVPPSYYLGVPNSNNSSYIDELSKIVPGTSTLPAHVLFIEPGFVPNSTLYVIQ RKCIWDSHNTSRSSDAMPIQLDVKCVQGLSLWCRNSAVMNDHLYKGYKGGNKRRTSNE YLAGYDFLDTSKRRFHVYVSYNSTFSRDNGHHPMTVLRVARLVNMASTAYLKFLRGPN VEMRLEYLKEMPKAAMKIRLDLTTLLDALFFTWTVQLLLPVMLTYLVYEKQHNLRLMM KMHGLKDGPYWMISYAYFLSLSAAYMMFFVMFGSLIGLDIFRLNSYSIQFVFYFLYIN LQIVLAFLLASFFSSVKSASVISYIYVFGSSLLGEALLQLFIEDITFPRIILNIYWIL IKNYHSTCLLEQWLVTMELVPGFALYRGFYELAEYAFAGRQMGKPGMQWRDLNDPING MKDVLLLMSIEWILLLPVAFLLDHRPTWHPLFLFGFMSTKHSSPTIIPDKVKQRSRKV FADMAKPDVFLEDQDHLPSKSCDFVTDMWDKGMVISKRKVVKKLLKEMDMRNMIICHN LKKVYPGKNGNPDKLAVKGLSLALRKGQCFGMLGPNGAGKTSFINMMIGLVAPTYGTA YIHGMDLRRDMNEIYANIGVCPQHDLLWETLTGREHLMFYGRLKNLTGAALLKAVNES LKSVNLFHSGFGDKSVNKYSGGMKRRLSVAIALIGNPKVVYMDEPSTGLDTTSRSNLW NVIKRAKKNCTIILTTHSMEEAEELCDRVGIFVDGNFQCLGTPKELKARYGGVRALTI TTAAGHEEAVERAVARRCPGAAKVYGVGGTQRFEVPRRGARLDGVLGAVEAARRAAPV VAWGVADATLEDVFVRVAMDARAAAHVLS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..75#235..631#1830..1933#2048..2189#2303..2422#2526..2650#3088..3246#3346..3508#3605..3730#3813..3896#3946..4358#4384..4458#4648..4848#5047..5156#5257..5341#5550..5678#5781..5886#6010..6098#6249..6551#atggcggcggcaggttcttgctccaggttcttcaggcaggtccacgcgctcctcctcaagaacctctctttccaggtaggtgatggtgatgcaaatgctgtttcatccatccacgaatccggttcttgaaatcgatttcaaacttgttcttggatgaagataatgtttggttcttgagatgttaatatgttatcaagagcttgctgaatttttttcgtgttcttgggatggcagaggaggaacgccaaggcgaacgcggcgatcgcggcgttcccggcgctgctgtgcgtgctgctcgtcacgatccaggccgtcatcgacggcgagctggaccggccgccgttccggtgcggctgcgcctgcgtgcgccgcgacggcggccgcgcgggcgcgggcgcgtgcgcggcgacggagtgcggcgtgcagcactccacggccacgcaggcgctcagctgcgccgtgccggcgccaccgaggtggccggcggtgacgcaggtgccggacgagccgtaccgcgcgctgacgcccgtgcacccggcgaggtgtcgcggcgacggtggcagcggcgcgtcggaggcgccgtgcccggtcgccgtgctcaccaccggccagaaccgccggctgactgaaggtgcatgcaaaccagcaaatgtagtatatttttatgttgttcatgtagctcctctgcattttttctttcgattttttaaatttgttttttctttattgtatgaaagacgcacccatacacgaataatctgacattatgccattgtcataagtgggtttcacccaaatgccgctgtcaaaaagagattcgataaaatgccactatcaatatacggttacacgctagaatattatatgggaccaaattaccctccactcttctcccccctctcagctagtccaaacatttccccttacatgacaagagagaggagaggagagcagatcggcgatgggaccaaatgccggtgggccaacaactagagggagaggtagagtcggtgaggcccaaagtcagcgagatagggcactaaccattagcaagaaagcagaggccacgtcatcggcactcggtgtgcacgacaaggtgacctacactggagtcgatggcgaacctggtcgaggcaatgcttgatgtaggccatccttcacgagccgctcatgcgtagtgacgagaagagaggggtcgcactcaactccctgccgcgatagccagagcttgcctaggtggcgccattgtccccggtgtagagggaggaggcggcgatggccgaagcccgccgaggcgccgccggtatccctagtggagagggaggagaaggtggaggtggcgatggccggagaccaccggggcaccgccgctatccccggtggagagggaggaggaggaggaggcgatggccatagctcgccgggccgctgccactatccttgatggagagggaatggagctgtggatggatgaagaagaggagtggaggggtaatttggtcccaaatagtattctagcgagtaggcatgagttgataatggcattttatcgaatcccttttggagaatggtatttgggcgaaacccacttgtgacaatggcataatgtcaaatttcacacgtaggaagcagatcctctgacagttaagtcactaacatgtgagtctcactttactatagctcacatgtcagtggctcaattacacatgcagttaagccagaggatcattttccttacaaacaccactacgcacacacatcacacgtgttttgctacaacttttgcttttgcttttgttgttgtgaatggaactttttttttttgccaggccttggaaggggatttttcccagatgtccctccttcatactatcttggtgtgcccaattccaacaattcatcttatattgatgagttatcaaaaatagtccctgtgagttgaatatttgaaattttgagtgatcagtggcgttttacacaaaagattcgatacttttttaactctgatttgtgatggaaaggtgataccgaatatttcttcttccagggtacaagcacattaccagcgcatgtattgttcatagaaccaggatttgtgcccaatagtaccctatatgtgattcaaagaaaatgtatatgggattcgcacaatacttctagaagttctgatgcgatgccaattcaactcggtaaaagattgtttgtttcttgcttgtatgaagtcgtagcaactagcatgaaatgttttcaaccctgaattacttgtgcatttgtgcactcctttttattttaattgtaatagatgtgaagtgcgttcaaggtttatcactgtggtgccggaattcagcggtgatgaatgaccatttgtataagggttataagggtgggaataagaggaggacatcgaacgaatatcttgctggtactttaatttagttttccttgcaactgtgctactaaagtagcagttcagtttttttttggcgggttgaacaactaacttattttaaggtccatttttgcaggctatgattttcttgatacaagcaagaggaggtttcatgtgtatgtctcatacaactctaccttcagcagggacaatggacaccatcccatgacagttttgcgtgttgcacggttggttaatatggtacttaacttgcctgttgtggtacagtttcacttttaggtagaggaatactccattgaatattaaagggcatttatctgaactaaagaaatatcaatcattatatagtaagaaccggaaaacatgatttttaccatttcgcttaatggaaaatggggatacccgcattcaaaaaatatatggtaagaactagaaatggaagtgctacataaaaggcatggtgcactcctgtactgttccatcaaaacaaggctactgtagcaaaaacagcacatcttctacaacaacacttcatggttcttgtcatttgtgttgtttttgttgcccagatggatatatgtgccattttttttcagagtcctttcctaaaaatgagttcatctgttataggtcctaaataacttagtattatcactactgttatgcattttcatcaggcatccaccgcatatctgaagtttcttcgaggacctaatgtagaaatgcgcctggaatatttgaaagaaatgccaaaagctgcaatgaaaatcaggctagaccttaccacactccttgatgcactattctttacatggacagttcaactcctccttccagtgagttaactttatcgcgtcccacaatcaatctcttatcaaagctatcttggattcatacataagttatttaccaatttatttcaatggttttttcaggtaatgttgacatatcttgtttatgagaagcagcacaatttaagactgatgatgaagatgcatgggctaaaggatggaccttattggatgatatcttacgcctattttttgtccctttcagcagcttatatgatgttcttcgtgatgtttgggtcccttataggtactgtgctagttaactacagagtatggaaattgagaatttagcacattcgagtaatcttcgaaatcactgagagaactctttttggtattacagggctagatatcttcagattaaatagctacagcatacaatttgtattctattttctatatatcaaccttcagatcgtgctcgcctttctgcttgcgtctttcttctcgtctgtcaagtctgctagtggttagtaaaattcaaaccttctgttctgttcattctatagctcttcaagtgacctcagaatcaaatattttctgtgttacagtaattagttacatttatgtctttggatcaagccttcttggagaagcacttctgcaattgttcattgaagatattacattcccaagtaagtataagcacttctgcaattgttcccatataaatttttttcccaggaattattctgaatatttattggatactcattaaaaactaccattctacctgtttattagaacaatggcttgtgacaatggagcttgttcccgggttcgccctctaccgaggattttacgagctcgcagagtatgcatttgcaggaaggcaaatgggaaagcctgggatgcaatggagggacttgaatgaccccatcaatgggatgaaagatgttttgcttctaatgtctatagaatggatacttctgcttcctgtggcatttttactggatcatagacctacatggcatccactgttcctctttgggtttatgtcaacaaagcactcttcaccaacaatcataccagacaaagtgaaacagaggtccagaaaggtgtttgctgatatggcaaaacctgatgttttccttgaggttagttaagcatacatccgaataggatcaggatcacctaccttcaaagtcatgtgactttgtcactgacatgtgggacaaaggcatggtgatttcgaaggtagaggatctcaatccatctgaattggcgtgcttctttttttttatctgcaataggtgtgattaaatacacgtctatagaagttaatagatggcgttttccaagatagaagtataatgaagtaatgcagaactataatatgcaacaaggatactgtcataaattgttgttcaaaattctacttttcagcgcaaggtggtgaaaaaattgctgaaggaaatggacatgaggaatatgatcatatgccataacctgaagaaggtgtaccctggaaagaatggaaaccctgataagcttgctgttaaaggattgtcgcttgctttgcgcaaaggacagtgttttggaatgcttggtcccaatggggcagggaaaacatccttcatcaacatggtgaatatttcacaatattcttgtgcttcttatgatgttttgtcaaaatagcatttatatctgcttcatcaacacttcaaagtagctctcatttttcacatgaatcaagtagtacttaaatttatccatttttcctagtagtgaaataacatgaaaaaacctaacaaatacaccttttggaccaatttatatttgcagatgattggacttgtggcgccaacttatggaactgcctacatacatgggatggatttgaggagagatatgaatgaaatatatgcaaacattggtgtatgtccacagcacgagtatgatctcaagtggctagttcttttgcatttcttctgaagatggttttgttagtgatatcattgccaacaaaaaagaaattgttcaatgtgtgtgcagtttgctttgggaaactctgacaggaagagagcatctaatgttctatggccgactgaagaatctcacaggtgctgctctactgaaggtagtttaattgaagccatgaaaaaaggaaagaacatgtaaaattacagcactagctttatacagtcaaactgcgagtttcaaatctcatactcctactatacttcttacaagtaaaattgcaaatgttcactccatttgtagtactacacatgacattggaaacaattctagtatttgatcatcagattttacttttcttgatccaggcagtgaatgaatccctgaagagtgtaaatctgttccacagcggtttcggcgacaaatcggtgaacaagtacagtggtggcatgaaaagaaggcttagtgtcgccatcgcactgattggcaacccaaaggtagtaaatttaccatgaactgttcttcattcccttccactcacatctctgaaaaaacttctgctgtaactatctctcattgattccattgatgttgaacaggttgtttacatggacgaaccgagcaccggattggacacgacatcgaggagcaatctctggaatgtcattaagagagcaaagaagaactgcaccatcattctcaccagtaattaattactcctcctcttggttaatttttttctttccagctatacatgcaaactgcaatatttgtgactaatttagcaactagaactgaatttatatacatgaacactgaacatttcagcacattccatggaggaggctgaggagctctgcgaccgcgtcggcatcttcgtcgacggcaatttccagtgcctcggaactccaaaggaggtaatcaaatttaaacacctcaaaaactcagttaaaaaaagcaaatgcagaattaattcatctgaaagtttgaattttttttgccggctattcagtaataagtgcattgattgattgattgatggattgattgattgattgatgttgcagctgaaggcgaggtacggcggcgtgcgggcgctgacgataacgacggcggcggggcacgaggaggcggtggaacgcgcggtggcgcggcggtgccccggcgcggcgaaggtgtacggcgtgggcgggacgcagcggttcgaggtgccccggcgaggggcgcggctggacggcgtgctgggcgcggtggaggcggcgcggcgggcggcgccggtggtggcgtggggggtggcggacgcgacgctggaggacgtgttcgtccgggtcgccatggacgcgcgcgccgccgcccacgtcctctcgtga</dnaseqindica> |
| External Link(s) |
