Difference between revisions of "Os08g0416100"
(Created page with "{{JaponicaGene|
GeneName = Os08g0416100|
Description = DEAD/DEAH box helicase, N-terminal domain containing protein|
Version = NM_001068343.1 GI:115476423 GeneID:4345577|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0416100| | GeneName = Os08g0416100| | ||
Revision as of 20:49, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0416100 |
|---|---|
| Description |
DEAD/DEAH box helicase, N-terminal domain containing protein |
| Version |
NM_001068343.1 GI:115476423 GeneID:4345577 |
| Length |
9152 bp |
| Definition |
Oryza sativa Japonica Group Os08g0416100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:19986598..19995749 |
| Sequence Coding Region |
19986794..19987164,19988156..19988291,19990171..19990221,19990300..19990381,19991048..19991100 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:19986598..19995749 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:19986598..19995749 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgcgcctcaacccctccaaacccagctcccgcggaggcaagccgaggtcctcctccgcggacgccatggcggagcacaagccgctgccggggcggccgaagcgggagggggaaggggcgagcaagaggaaggccaagtcgggcgggttcgagtcgatggggctgtgcgaggaggtgtaccgcggggtgcgccacaaggggtaccgcgtgcccacccccatccagcggaaggccatgccgctcatcctcgccggccacgacatcgccgccatggcgcgcacgggctccgggaagaccgccgccttcctcgtgcccatgatccagcgcctccgccgccacgacgcgggcgccggcatccgcgcgctcatcctctcgccgacccgcgacctcgccacgcagacgctcaagttcgcgcagcagctcgggaagttcactgatctaaagattagcctgattgttggtggagatagcatggagagtcagtttgaggaattggcagaaaatccggatatcataattgcaacacctggcagactcgtgcaccatctggcggaggttgaggacttgaatcttcggacagtggaatatgttgtgtttgatgaggcagattccctctttagcttggggttaatccagcagctgcatgacattctacataagctgagtgatacacgacaaacattgctcttcagcgccaccttgccacaagcccttgcagattttgcaaaagctggtctacgtgacccacaaattgtaagacttgatttggacaaaaagatcagtcctgatcttaaacttgcctttttcacgctgcgtcaggaggagaaattagctgctttactgtacttggtcagggagcgaatcagctctgaggaacagacaataatatttgtttcaaccaagcatcatgtggagttcctaaatattctgttccgggaggagggcttagaaccttccctttcctatggtgctatggatcaagaagcccgcaatattcatatttcaaaattcagggcaaggaaaactatgatacttattgtgacagatgttgctgcaaggggtctggatattccattgcttgataatgtggtgaactgggacttccctgcaaagcctaaattattcgttcatagggttggcagagtagctcgacaaggtagaagtggcacagcatatacttttgtcacttcggaggacatggcatatttattggacctacatcttttcctttcaaagcctcttagacctgctccaacagaggaggaacttctgaaggatatggagggaatgaatttaaaaattgatcgtgctcttgcaaatggagaaactgtgtatgggcgttttcctcagacaatcattgatcttgtatctgatggaataaaagaagtcatcaatggatgtacagatctaattgcattggaaaagccatgcactaatgctttccatttgtatctgaagactcgtccaatgccttcaacagaatcaatcagaagggtaaaagatttgcctcgtgaaggtcttcatccaattttcagggacgtacttgggtcagatgagctttcagctcttgcattctcggaacgcttgaaatcatttcggccgaagcagacgattttagaggctgaaggtgaagctgctaggggttcaaatcaatggctagatgtgatgaagaagaaaagagaagtgcatgagggaattataaatttagtacatcaaaagaataatgttgatcatgagccaaaggaagaattggtagagaatatttcaaactgggagagaaaagatgtttgtggtaataagcggaagttacagagctttagagatgaggaatactacataagttcagtgcctcaaaaccaacatttggaagctggactgtcagtgagggccaacgaaggatttgttgaaaatagattggatgctgctgttcttgatctagttgatgatgaaacttctggtatgcaagcacagaaaactcgatatcactggaaaaagaacaagtttgtcaagttaaatagtggggatcgtgtcactgccacaggaaagattaagacagaaagtggtgcgaagttaaagccaacaaaaacagggatatacaagaaatggcaacagaagacacatagatctatcgatactggtagaaaatttggtggctttgcagaagagggtgcatccacgacaggtagccatcaaagaggaaacagaaaacacactgcagtgggacgggggcgtcgctatataccgaacgccgacgtaccgtctgagattagaaatcccgaacaaatacagaagagcaggcagcaaaaagcaatggatattgcccgcatgaagaacagatccacaaaagagagtaaattccagaaattccagaagaacaacaggaggcacgatggacccttgaaagatggcaaattccagaagaacaggagaccggatggcaatggaaagaacaggagaccggatggcaatggaaagggacgggggaaaggcaaaggaaatgcaaatggatttggtaaagggaagggaaaaatgaaagggaagggcacaaggtga</cdnaseq> |
| Protein Sequence |
<aaseq>MARLNPSKPSSRGGKPRSSSADAMAEHKPLPGRPKREGEGASKR KAKSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAA FLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSME SQFEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDI LHKLSDTRQTLLFSATLPQALADFAKAGLRDPQIVRLDLDKKISPDLKLAFFTLRQEE KLAALLYLVRERISSEEQTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIH ISKFRARKTMILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTA YTFVTSEDMAYLLDLHLFLSKPLRPAPTEEELLKDMEGMNLKIDRALANGETVYGRFP QTIIDLVSDGIKEVINGCTDLIALEKPCTNAFHLYLKTRPMPSTESIRRVKDLPREGL HPIFRDVLGSDELSALAFSERLKSFRPKQTILEAEGEAARGSNQWLDVMKKKREVHEG IINLVHQKNNVDHEPKEELVENISNWERKDVCGNKRKLQSFRDEEYYISSVPQNQHLE AGLSVRANEGFVENRLDAAVLDLVDDETSGMQAQKTRYHWKKNKFVKLNSGDRVTATG KIKTESGAKLKPTKTGIYKKWQQKTHRSIDTGRKFGGFAEEGASTTGSHQRGNRKHTA VGRGRRYIPNADVPSEIRNPEQIQKSRQQKAMDIARMKNRSTKESKFQKFQKNNRRHD GPLKDGKFQKNRRPDGNGKNRRPDGNGKGRGKGKGNANGFGKGKGKMKGKGTR</aaseq> |
| Gene Sequence |
<dnaseqindica>8586..8956#7459..7594#5529..5579#5369..5450#4650..4702#4438..4514#4230..4269#2736..2837#2472..2514#1215..2376#163..601#agcccagcccgccaaacacgcaccgtctcgcagcctcgcaggttaaccctgctgcctactccgccgcctcctcctccccccgcctcgcctcgccgccgcggccgagacctcaaagccctaaacccacccacccaccccatctctccctctctcctccctcccatggcgcgcctcaacccctccaaacccagctcccgcggaggcaagccgaggtcctcctccgcggacgccatggcggagcacaagccgctgccggggcggccgaagcgggagggggaaggggcgagcaagaggaaggccaagtcgggcgggttcgagtcgatggggctgtgcgaggaggtgtaccgcggggtgcgccacaaggggtaccgcgtgcccacccccatccagcggaaggccatgccgctcatcctcgccggccacgacatcgccgccatggcgcgcacgggctccgggaagaccgccgccttcctcgtgcccatgatccagcgcctccgccgccacgacgcgggcgccggcatccgcgcgctcatcctctcgccgacccgcgacctcgccacgcagacgctcaagttcgcgcagcagctcgggaagttcactggtgcgtgtccctcccgctcgttacccaccccccagctaatctagctcattagcttggtaataatctgattcgcgtaagccacatttgatctatagggtggtggttatactttctcgtgatgcttctgctttgagatttttgatgttttgccaaattatgtcgttatttcttaacagcagtctatgggttggttattttgctttaggattgttgtatgtctctgaaattgtatggttattggagtttaagcttcctatgttgcattgaatcatgcatcgttgggctgaaatatccataagccattgattaattgatagcatgcatgcagcctcatgttattcgttagcttactttttcattgtcactgctgattttgttgagtgttcctcaatatcatacttattagttgtgttaacgatatgacacaatctttaaacatgatgcaacacgtgttgagctgcttgtgaccctcagtaattttccagtggtgtttgtaatatatcctcattataacttggataacatttgtttatttttctaggttgtgtctttctatctgccagataaaatactataacaatgttgatgagtatatatattttcctttttgtagatctaaagattagcctgattgttggtggagatagcatggagagtcagtttgaggaattggcagaaaatccggatatcataattgcaacacctggcagactcgtgcaccatctggcggaggttgaggacttgaatcttcggacagtggaatatgttgtgtttgatgaggcagattccctctttagcttggggttaatccagcagctgcatgacattctacataagctgagtgatacacgacaaacattgctcttcagcgccaccttgccacaagcccttgcagattttgcaaaagctggtctacgtgacccacaaattgtaagacttgatttggacaaaaagatcagtcctgatcttaaacttgcctttttcacgctgcgtcaggaggagaaattagctgctttactgtacttggtcagggagcgaatcagctctgaggaacagacaataatatttgtttcaaccaagcatcatgtggagttcctaaatattctgttccgggaggagggcttagaaccttccctttcctatggtgctatggatcaagaagcccgcaatattcatatttcaaaattcagggcaaggaaaactatgatacttattgtgacagatgttgctgcaaggggtctggatattccattgcttgataatgtggtgaactgggacttccctgcaaagcctaaattattcgttcatagggttggcagagtagctcgacaaggtagaagtggcacagcatatacttttgtcacttcggaggacatggcatatttattggacctacatcttttcctttcaaagcctcttagacctgctccaacagaggaggaacttctgaaggatatggagggaatgaatttaaaaattgatcgtgctcttgcaaatggagaaactgtgtatgggcgttttcctcagacaatcattgatcttgtatctgatggaataaaagaagtcatcaatggatgtacagatctaattgcattggaaaagccatgcactaatgctttccatttgtatctgaagactcgtccaatgccttcaacagaatcaatcagaagggtaaaagatttgcctcgtgaaggtcttcatccaattttcagggacgtacttgggtcagatgagctttcagctcttgcattctcggaacgcttgaaatcatttcggtaatttcttgagttagcattacttccaatttttcttgcacttgctcattctgtgtcatgtaatgggtctcattctgaattaatgattatgccaggccgaagcagacgattttagaggctgaaggtgaagctgctagggtaagaaattccaaagtaatcaagtagttctttttttcaatttgtgaattttgaaaatcatgttcttatgtttcttctaaacttgcaacaggtagctaaatctaatttttcatatacttttagatgtctggaatgtaatacatccaaatgtgacagatgtgcaattgtgtaatagcatttcatcaaacttacctgacatcaccatcttggattgcttgtagggttcaaatcaatggctagatgtgatgaagaagaaaagagaagtgcatgagggaattataaatttagtacatcaaaagaataatgttgatcatgagccaaaggtaattattactcttagaaggacatatgcttctttctttaatggaatgccacacagatctcctgcgtgtttgagatgaaaggacatacgcttgtttgctctcattagacgtggcatgtttcggaccacaacttggatattttcctaagacacaagttaattggatataagtttattagatcatggaaactctagcagttaggtgtggcagttccagtcaggccatggcttacttaaggtctttaatcagacctgtactattttgtagtgatgtgtaatttatgtgagaagctaatctaaaatagctctctctatatatatcctatatagttggaaccaaaagctcaacatgcattgagccacatcatcctaaaaatcctgatcgctggagggttagaagaaggtcttagcttatgtgaaactgtagttagtactttaattctcctctattcgcatgcatctcatcgttgtaattgtggtacattcatacagctctatgttttagttggaagactgttgatctcctcggccatgcaactgaagagtttaagtcctttaattttattttgttcatcttttctttttccttagcttgcatatctttttaaagccatttatctgtacatagtcatcccacagcaacacgtggggtatcgtctagttattctagtaaatacgatcactacaaaatagagcaagtggagattgtatttctaacaaagctgactgatagaatttaccatgcatgttacaaactgcagaatatttcccacacatactattttgtatatatgacggccttgtgatgttatctactcacatctgatgtttacttctacctaccttgggagccagtaatgatcagtaaacagctaattctgtttgttgggaacttgggatgcttctattgggatgctcattagcttgagttgtttactactccaacttttttcagatgtgatattgtacttctgtattatatctatgcatgtgtggctgatgtttgtttagcaatatatgtttgtaaacattgttacatgaaagtatgtaacatcgcagatgtagatcaaccatgcatggtagtgattgttagcaattgatccttctgctgtttgttagtttctcatactcattcagctgcccacctaatgatatttgcaaccttgtatgactgtttatgtgttcaactgccctacagtgatggggagggcaaacagaatcttctgtttttcagattaatcgcttgttagattttagaatgtaaatggaaaaacatgacttgctaatatgaacacaaatatacttttttcctattttgcctgtgctacatttaatgtgatgcctttttttttcttattctttgaatactgattttgtgattttacttatgcaggaagaattggtagagaatatttcaaactgggagagaaaaggtcctaaattattttctccctttgattgtcattgtgcaagcaatacctctgttatgctgtttaacttaaaagggcttcttgaagtttcttgctcactgacagtattcctgtagaagtcgcaccattatcactgtgattataattttttgtattacatatccatttcagatgtttgtggtaataagcggaagttacagagctttagagatgaggaatactacataagttcagtgcctcaaaaccaagtatgcctcctaaacccagcataaagaatccctgctacaaaatatgtgcgggcttataaatactcgaatttctttatttcttatttaacagctgcctgatgtagcttttcttcctcattaatttttttactctagcatttggaagctggactgtcagtgagggccaacgaaggatttgttgaaaataggtatgcacttgttgatatatgattatgaccttcagttttgagtctaagtgagcttttctattgacaaatttcaatcagcatagcaaataaattgtacacctactgggaaaaattatgctgtttatatcagggataaaagtttggtactgggaaaatttattggagctaggacggtagctttgagccagcttgtttcttacctctttctggtttatttatgcttgcttttttcatctcaatattttggtatactttcttcaaagattcgtgtcagtttttgtctctgtaagcagtagtaaaatgtttgaattagtaggaaagaaagcatacctttcctggcagtatgacctacctgtccaaccatttttttcttcccttgcctggccgactcggatatcatgctatgttgaattgtattttgttatagcgtcttggcatttgctgctttaatatcaaatatccccctacaacatattaaatatttgcatgattaaaccaaaagtacatagaactccctgtaggatctgctgtcttcaactctaagaattaaggctaataatttggatgcacagtacttttgtccaaactatgtttttattatttgtgaaatgaacctgcggcctcgttgttttgtgccttaagtaaaagcttagtgctatcatgcagattggatgctgctgttcttgatctagttgatgatgaaacttctggtatgcaagcacagaaaactcgatatcactggaaaaaggtatgactattgatagtgacattaaatttggtggcatgcagttcacacatagtcatggtgcttattttattattgcagaacaagtttgtcaagttaaatagtggggatcgtgtcactgccacaggaaaggtaagtgttggttgcgttaataatcgtgttttggattgctggacttgtaaacatgttgattggcatctctagagtgaattgaattgctttattttgatttaaatattctgtttccttctaatgtggtatggactttacaattgtttcgctagtcataaataccctggaattcttgtgctgtatcaaattgaactggaaataactgaactgttggaaatagtttctgcattcttaaaatatacttgtagttgtgtggatgcattgattgatattctctccatctgaaactatgcagaactgatatgttagtaaaaaatcggtaatggaattttagaacataggggttccattggaacctataatttattctaacatcaattgtgttaactactatatgcgataactcccagcatgattctcctcttgtaccgcatatgagtgcatttggatagtgttatctaagaactgatttgatggattgttgtgatataaaagatggtactcatggctctggtaaatatgtcttcacaatatgctaatcatggctacttccatttctctgagattaattatcatcatggattcgatttcagtaaagaaaaagcataaagaataagtggggaagtttgaatttgttagttttactgctggagacttagagataatgtttctgcatcttctacgatatttaggagaagagttccttatttgccatgcaaagttagcaatttccttctatgcctctaagaactttccccatcctttttatgcctcccatacgcattctgttagcatcctgttaagtatagcctgaaactgtggagttgcccttttcctcctgaccaccacctttgcctttcatgatctgtaccatcactgtttcttaaattcccaccaaggattagagcaacagtaacatgattaaactaggaaccagattatgaagtacgaactcaggcaaacacctatcctttagtacaattcatgaactgtacacacacatcgaggcgaatgcagacacatctatgaagacattgcaagttgagtggtgcggttgtggccttaggctgtgttcagcagctcttgttcccaactacacctccttcgttttccgcgcgcatgcttcctaaactgctaaacggtgcgttttttgctaaaaatttctatatgaaagttgctttaaaaaatcatattaatccatttttcagggaaaaaaatagctaatacttaattaatcatgtgctaatgaaccacctcgttttacgtgtttggagggagagttgggcctactgaacacatccttagtggagttctttcattggtgtgccttgatccatggcctgctcctcatgctggccacaaaaaaaaaggccaggatcgatagagccaaaggagtgattgcaagggtgtcaactgaagcagatgacaatcatgggcacttggcaacaactcattcgtgctagcctgctaggattacaggagttgaatgagaaagcatgtaaatatcatcaatggactaagaagaaatcagatatttcggtggaatacaaggaaactgagtaattttgcacggggaataaggagttctcccaatatttagtggtcactagtcaatgtgtagtttgccctttccatacgggaatatgtatgatgctctttcccatgcgtaggatctattgatattttttttccataatccacaaaactggttggcaggtcatttttttaccttttgtttttgtgattgagatgatttttccacattgcttatctgcgtcacattgagagtttctgtttatagttcatgttttgcctctatgtcactgaatacataataatggaatttctcatgtgtaaaatctgccaactttccttatagattaagacagaaagtggtgcgaagttaaagccaacaaaaacagggatatacaagaaatggcaacagaagacacatagatctatcgatactggtagaaaatttggtggctttgcagaagagggtgcatccacgacaggtaatgctttatatatcctctttttgtacatcacatgatcgcaatgccttcttttttggtcaactgttttgaattttattgtaatttttatcagcccatttaatatagaaggggtattgaccagaattggttcataaagatcatcagaatcgccatctagtgggtgctataacatgtcaacttcccaagattccactcataatttctcatatggcgagcttatttttaattgacttcctttttgtggggtttatgaattacagatagttctgcgatgatctaatatatgctcacttgcctgttcatccaaattccaaaattatataaactcagcgtcaagccataacttttgtttggagcactaagtaggtagagctaaagctactggttcacaccagcctaccatggcataatttacccataggtcatagttgccatcgttgtctgcatcctttttgcatcatacatgtgtagtttaattttgattgcaagtgatagctgatttattttctcattgatgaaacattgggggattctatgggattgcgaaagcttgggagagatggctgggtaaaccattttttttattaatagggtcgagtaatatgtttagccaatctttagttgatttgcaatgttttttttggtgcagtggtccttgcacctgttccattcctggttagtttagtggtgcacctgtcacaaatggttggacttgcattattttgaggcaatggttgaaacttagtgtacaaaaataaggagaaccctggtgatgagttgaccagaattgacaggaaaattatctggaaccacaaacatttgaatggggaaaacattgcttcacatgaacttttagctgccttttgcaattattgtctgcttgcttgtatctttcatgaaattttgtcagcatggctttctcctgttctgttttgtgccgtaacagctctaagcctctaacgctgcctcatgccatgacactttgcaggtagccatcaaagaggaaacagaaaacacactgcagtgggacgggggcgtcgctatataccgaacgccgacgtaccgtctgagattagaaatcccgaacaaatacagaagagcaggcagcaaaaagcaatggatattgcccgcatgaagaacagatccacaaaagagagtaaattccagaaattccagaagaacaacaggaggcacgatggacccttgaaagatggcaaattccagaagaacaggagaccggatggcaatggaaagaacaggagaccggatggcaatggaaagggacgggggaaaggcaaaggaaatgcaaatggatttggtaaagggaagggaaaaatgaaagggaagggcacaaggtgatttgacgaagaaaatgttatccaaagcacaggagaggggctgctgcgctatcaacagcaggtgctgtttgccttctcgtgtattccagttttgtttgctttcctaatcgttcctctaattgtaattcaaagcatccgagatcttaccgagaatatactcgttcgcgttactaatttaaacattggatagttttgtc</dnaseqindica> 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| External Link(s) |
