Difference between revisions of "Os08g0421700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0421700| Description = Zinc finger, CCHC-type domain containing protein| Version = NM_001068357.1 GI:115476451 GeneID:4345594| Length = 138...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0421700|
 
GeneName = Os08g0421700|

Revision as of 20:49, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0421700

Description

Zinc finger, CCHC-type domain containing protein

Version

NM_001068357.1 GI:115476451 GeneID:4345594

Length

1387 bp

Definition

Oryza sativa Japonica Group Os08g0421700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20272797..20274183

Sequence Coding Region

20273107..20273850

Expression

GEO Profiles:Os08g0421700

Genome Context

<gbrowseImage1> name=NC_008401:20272797..20274183 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:20272797..20274183 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtcgtcgccgactccagcgccgctgctccccgtggccccgcttgacggcggcggcgggtacctccggtggaaggagtccgtgctgctccgcctccgcaccctcgacttggcctacgtgctgtccgagcaccagccagaggacgggaggagtgattctgccaagaagaagcgggcgcgcgacgacgagctctgccgcggccacatcctcgccacgctctccgaccgcctcctgccggactacgcgcaccacgccaccgccgcggccgcgtggcgcgccctggcgcgcacctacgacatggacggcaagttgcccaacttgccgctggaccgcttcttcgcatacaggttcgtggacggcgagcccgtcctggagcagctcgcgcacctggaggccatgggcgtcgccggcaagctcgatgaccgtacaatgtacggcctggtgcaccagaagctcccgccggctctggtgaaggccatcgctctcgcgtcgccgccgtacccggaccctccatccatggaccacatctgggacacggctcgacttgaagagaggatgcgtttgtgcggcgaaattcgccgtggcgagcacactcaggacaaggaagacgacgacgaccaaggaggaggagactacccagatgaagatcaccggagcccgaaacggaagaggcgatacgatcgcgggccgtgctacaactgcggcgagccggggcacatcgccagggattgcagaggatga</cdnaseq>

Protein Sequence

<aaseq>MMSSPTPAPLLPVAPLDGGGGYLRWKESVLLRLRTLDLAYVLSE HQPEDGRSDSAKKKRARDDELCRGHILATLSDRLLPDYAHHATAAAAWRALARTYDMD GKLPNLPLDRFFAYRFVDGEPVLEQLAHLEAMGVAGKLDDRTMYGLVHQKLPPALVKA IALASPPYPDPPSMDHIWDTARLEERMRLCGEIRRGEHTQDKEDDDDQGGGDYPDEDH RSPKRKRRYDRGPCYNCGEPGHIARDCRG</aaseq>

Gene Sequence

<dnaseqindica>311..1054#gattcgtgaaagagaagcctccttccaccaccgatccacataagtccaggaagccgcctcctcccaccggcgccgacgaggaaagccgccgatcgacgggaaggccgccgcagcgccgtcgatctgcgagacctgaggtatgtcaccgcgccgcaccaccgtagctgacgtcgaccaccttatctttgttcttttaatcacttgttcgcagttgggctgcacgccaactgtttgtgaaaatgatcacgaaagcaaaaggatccctcctgtcctgcctgcctgtccaggtgttgctgcgcgaccgcgggcgatgatgtcgtcgccgactccagcgccgctgctccccgtggccccgcttgacggcggcggcgggtacctccggtggaaggagtccgtgctgctccgcctccgcaccctcgacttggcctacgtgctgtccgagcaccagccagaggacgggaggagtgattctgccaagaagaagcgggcgcgcgacgacgagctctgccgcggccacatcctcgccacgctctccgaccgcctcctgccggactacgcgcaccacgccaccgccgcggccgcgtggcgcgccctggcgcgcacctacgacatggacggcaagttgcccaacttgccgctggaccgcttcttcgcatacaggttcgtggacggcgagcccgtcctggagcagctcgcgcacctggaggccatgggcgtcgccggcaagctcgatgaccgtacaatgtacggcctggtgcaccagaagctcccgccggctctggtgaaggccatcgctctcgcgtcgccgccgtacccggaccctccatccatggaccacatctgggacacggctcgacttgaagagaggatgcgtttgtgcggcgaaattcgccgtggcgagcacactcaggacaaggaagacgacgacgaccaaggaggaggagactacccagatgaagatcaccggagcccgaaacggaagaggcgatacgatcgcgggccgtgctacaactgcggcgagccggggcacatcgccagggattgcagaggatgagctgggtctcctgagctttgcattacctaacttcagcttattttggatgtagaaaccacaagggaatgctcaaggatgataggcatgttggtaacttagttgctagagcaaattaggcttattttggttgtctagttaggtttctctttgatggcttctttagacatagtacttatgggccatgggagctattttattctcgactcgtagttatgggccatggcctcatgcttttggcaaagacattgcaattgcatgttggtcacgctgttgcaaacttgtgttctgggaatcggggaagatgctgggtgcatggaagatatacttttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0421700, RefSeq:Os08g0421700