Difference between revisions of "Os08g0436200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0436200| Description = RINGv domain containing protein| Version = NM_001068422.1 GI:115476581 GeneID:4345666| Length = 5268 bp| Definition...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0436200|
 
GeneName = Os08g0436200|

Revision as of 20:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0436200

Description

RINGv domain containing protein

Version

NM_001068422.1 GI:115476581 GeneID:4345666

Length

5268 bp

Definition

Oryza sativa Japonica Group Os08g0436200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21282869..21288136

Sequence Coding Region

21285249..21285500,21285699..21285770,21286745..21286807,21286945..21287097,21287185..21287261
,21287356..21287446,21287697..21287819

Expression

GEO Profiles:Os08g0436200

Genome Context

<gbrowseImage1> name=NC_008401:21282869..21288136 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21282869..21288136 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggatcatctaatgcttaatgttagcaaccttcccgagtctgttgaggcgaccgaggcagccatgaatctgccttccgggggagtttctctaccaccgttgtctacaactcatacacttttgtcagttcgggaaagcatgggtgctgaggaagagcctcttattcagacagtagaatgtcgtatttgccaagaggaggataacatcagcaaccttgagagtccatgtgcttgcactggaagtctaaagtatgctcatcgggcttgcgtgcagagatggtgcgatgagaaaggagatttgacatgtgaaatttgccatgagccatacaaacacgggtacactgcacttcctagagctcatcctgatgagacaaccattgatataagtggtggttggaccattaccggcacagcatttgatttgcatgatccaaggattattgcaatggcacaaaatcacataatggaagctgactatgatgattattcagtaacaaatgcgagctctgctgccttttgccgctctgctgcgcttattttaatggctctgttagtgttgaggcatgtgttggtactaactgatgaagatgaagacgacgcttcttcaatgtttttgctttttctactacgagtcaccgggtttctgctaccattctacatcatggcttgggcaatcaatatcttacagggccgaaggcggaggcaggtagcggctgctctagctgcaactgaggtggcattcattctacagtcaggacaaagaaggggcatgaatttcaccatcgcaccagattcccctgccacacctcagcatgagcctatcccttga</cdnaseq>

Protein Sequence

<aaseq>MKDHLMLNVSNLPESVEATEAAMNLPSGGVSLPPLSTTHTLLSV RESMGAEEEPLIQTVECRICQEEDNISNLESPCACTGSLKYAHRACVQRWCDEKGDLT CEICHEPYKHGYTALPRAHPDETTIDISGGWTITGTAFDLHDPRIIAMAQNHIMEADY DDYSVTNASSAAFCRSAALILMALLVLRHVLVLTDEDEDDASSMFLLFLLRVTGFLLP FYIMAWAINILQGRRRRQVAAALAATEVAFILQSGQRRGMNFTIAPDSPATPQHEPIP </aaseq>

Gene Sequence

<dnaseqindica>2381..2632#2831..2902#3877..3939#4077..4229#4317..4393#4488..4578#4829..4951#acgaggacgagagaacgaggaggcacgcacgagagctcctcctcccacccaaggtaagaacatgcaatttttctcccccaaatttctccccccacccaggaatccgctcttctcatcatcaggatttcgttccctccactggggatcgattccattcgattcgattcgagaaggggaggagtattccaggggcgatctgtgttctggcccaaacgtggcgtcacgcgcgagagaatttgcggaaggatttcgatcgatgtagtcgagcgcggaggggatgtttgtgtgtgcatgtcgtgggatttaattgctcctttgtcaaatatgaatgtgggatcgatgggagagagattttgggaggaattcgccgcaacatgcaacaacatgcaagataaaaggtaatagtgcatgcatgcatagaagaaagaaaataaaggtgacatcatatggttagatgaagcatgatcctcccaggtactacattagtttcaaacataacttcaaactattttttttcttttaaaccatttatttgatttacaatctgattatgccattatatttgtcacaattaaatctttacaacaagatctcatataattatattccaatgaaaaaaaatatgtctcaataattaaaaaaatatgtcacatatgtgaaaagggaatgtttcacctaaaaccaactttgttgcacatttttagttttcttgttgcaatggattttttcttatttaaatgtttcaataagtatttcctgatgttgcactgcatcatttgcagatattgaacatagtattttgtgaagtctcaataattcatgcataatatatataaaagtatctcaacaaatcatgtattttgtaaatatacctatgtttcatatgaatcttatttgatgtttcatttgttggtaattaatgtttcgtgtagtgattgtctgtgttgcagccaatattttgtttctgtcgcatctccttgaaacatttgatagaataagtagaaacatctttttatgagtagtggaacaacatattttttttaaaaaaatataatagtgtaagatcttgttgtaaagatttaattatatcgaatataatagtgtgattagattttagatctgatgcataatttatgagaaaaagtatttaaaatttgtaaacaagtagttatgtactgctaacaatataggagtatttgagtagaaggagagagaatagtgaatatttgttgcatgtgtcagacgctcagagtagcagatgtgcaatgtttgcaggtggggagagagtgcaagatgtagcttgcatgcagtgggcggacaggcacccgatttttcccaaatatcgggcgcctaatctatattctcctccgattttctacagtggtgtgatgtaggaaaaaatgatgctggaaaaagggagaaacgtttggttcccattgatcccttggattagaaacatttgatcgcattgtggttaagcgcaagatggttgagtgcttattgttacattgtaacatttgatcacaacacaaagtgaagtttgaacgcaacattgtttgatttttattaatcgtgttttgattggggacaattatttgtgttcatttgtccaaaaagtaggattcgggcatttattttttttactaaggaatggatggcttataggttgatgtaggaaatgtttcttacaaactcacattttttgtttggtgaattttttgccactatgtttttggataatcaatccttgtccaatacaattgttttcttgtttgttagttataaatgttaggaaacatccatgataatgtattgcaaaccgattgtttttgtctgtttttgtaatgagagttttactcgaaacgcgtttgctaaaaacattttgtaatattctcttagatatgttcttttgaattgctttggtgcttagatattaacaatgtaaagaaatacatgctcataaagttgccagtcatgagaatttgttcgttctaatgttaacaatgtaaagaaatacatgctcataaagtttttttttttgcagcacggtggagctcatgttctcggtgcctgttctcaatcctaataaagttggctgacgttgcatcgccggcctggcaaaaaatcagtgcttgtttttgtcttgaagcttccacggttccactaataactcaagttccttctttcctgagaacaggcattgttattctccagaagccattttgttagataatattcaagttaatcgtgtattgattgaatgttctgtgtttttagcccatttcaggagggatcttagcagagtacgtcaattttattattcaatactgcttgtggatagaattactctgttggcaaggttctttgttttaagtaacaaatgaaggatcatctaatgcttaatgttagcaaccttcccgagtctgttgaggcgaccgaggcagccatgaatctgccttccgggggagtttctctaccaccgttgtctacaactcatacacttttgtcagttcgggaaagcatgggtgctgaggaagagcctcttattcagacagtagaatgtcgtatttgccaagaggaggataacatcagcaaccttgagagtccatgtgcttgcactggaagtctaaaggtattcattcatccatcaactttcctttgcatcctgtgtactttcagttgcaaacaacagaaaatgaaaagcaaaaaaaaattattcaattgtcttggttgttttatatgagcattaagtactagtatacctctgtaggactaaaaatgcattttgtgtggaaactcacaaagatctgtctaatattttgttttgcagtatgctcatcgggcttgcgtgcagagatggtgcgatgagaaaggagatttgacatgtgaaatttgccatgaggtgaattaacactttttgaaatgacatctctatattttcttactggattttagtcggcacctagcccggctttacccgacaaggtcttttaaaatgaactttgagcattaatttctcttatatcatataattaatctagaaaaatcatgatcagatggaagtatgttcaactagaaatctaatgtcaccactattatgtgactaaaacatcctagagccaaaagttacaaattttgaattttgaagtatgtgtgcaccttaaaagtgataagatggagtatcaactacgaagccatctaaaaatttccaatattttttttccatattggcttcttattttaagtatgttaaagatgtgaaaaatgtttgtgcaaaaggtggtgttcttgtgttgatcaaggatttaataagtcgtttgattttttttctaatcaaactttattaagtttcaccaagtttatagaaaaaaatgcaacatctaaaatataaaatgagttttattaaatctaacattaaatatattttgataatatgtttattttatgttgaaaacactactatatttttctataaacttggtcaaacttaaaaggtttgactagaaaaaaagtcaaacgactcataatatgaaacatagggagtactgtatattggtagatgattgtagacatctcaatgaagaacataaaactaagggaggcttgagagatcaattatcttatatctgtgaatagtatcatgttcttgtatcaggttgtcttgaagtcgatctcttttaacactagaacgaatggcgataaattcatgaaagcaatggatgacattttaagtgattttaaagtagaagtagactgaacctggagcaaaaataaatggatcaatgtttattttcatatatttcttagttcacatcataatatcattcaaaaatcaagtcatctgagctctgtggctgaaagtttacttgtttgcagccatacaaacacgggtacactgcacttcctagagctcatcctgatgagacaaccattgatataaggcaggcatccatactttactatagtcatttttttatttattttaactatttacctgtccccataactatgtaagaggaatgatcatctattgtatgttttttctgatgcgtctttcatcctcctctctggtgtatagtggtggttggaccattaccggcacagcatttgatttgcatgatccaaggattattgcaatggcacaaaatcacataatggaagctgactatgatgattattcagtaacaaatgcgagctctgctgccttttgccgctctgctgcgcttattgtaagttccctttgtgcattcacgagacatctattaatagctctcgcttactatacacttgaactgtattttgtattttgtgttcagttaatggctctgttagtgttgaggcatgtgttggtactaactgatgaagatgaagacgacgcttcttcaatgtttttggcaagtgaaataatcttcttggaagtgtacattgatacacttgtttctgtctttctggccccctcatactgatagaaaaccgatcgtttggcagctttttctactacgagtcaccgggtttctgctaccattctacatcatggcttgggcaatcaatatcttacagggccgaaggcggaggcaggttagggtaccataaacattccaatggacaagtagattattaaatattgtgtaagaactcctaatcagttaattgtttgactacaaccacgttaattgggaagttgcttcgattaaaattttctggagagcttgaattctttaaacatggaaaaccaacaattaggaaattgtgttttggtactttttatatggtttcatgattcaacactacccaatctttaaatttgtgtaattttcttcccatctaggtagcggctgctctagctgcaactgaggtggcattcattctacagtcaggacaaagaaggggcatgaatttcaccatcgcaccagattcccctgccacacctcagcatgagcctatcccttgaattaatgttgtcagcatcactcaagttcatgtggcattgtttagctgatgacttgacgaagaatttgttaattgtgattaattaattattcagcacaagatgagatgcaatgtcatctcttatcagatagaatgtattaattcatgtatgttttggtgtgtgtgtgtgtaagaggtgtctgtgatactgaagccccttttttatgtatgtatggtatgggttctgtgttcagtgtcctgcgtataggtagagagcacggagaaacactttcagtaggttcctaatttttgtctcccagaaatccttgattttatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0436200, RefSeq:Os08g0436200