Difference between revisions of "Os08g0440800"

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(Created page with "{{JaponicaGene| GeneName = Os08g0440800| Description = Glyceraldehyde-3-phosphate dehydrogenase| Version = NM_001068440.1 GI:115476617 GeneID:4345685| Length = 4987 bp| D...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0440800|
 
GeneName = Os08g0440800|

Revision as of 20:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0440800

Description

Glyceraldehyde-3-phosphate dehydrogenase

Version

NM_001068440.1 GI:115476617 GeneID:4345685

Length

4987 bp

Definition

Oryza sativa Japonica Group Os08g0440800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21533793..21538779

Sequence Coding Region

21534095..21534248,21534716..21534909,21535016..21535144,21536799..21536918,21536998..21537134
,21537216..21537371,21537812..21538190,21538288..21538404,21538505..21538618

Expression

GEO Profiles:Os08g0440800

Genome Context

<gbrowseImage1> name=NC_008401:21533793..21538779 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21533793..21538779 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggtggcggggacgggggtgttcgcggagatcctggagggggaggtgtacaggtactacgccgacggggagtggcgcgtctcggcctccggcaagtccgtcgccatcgtcaaccccaccacccgcctcacccagtacagggtgcaagcatgcacccaggaggaggtgaacaaggtgatggagacggcgaaggtggcgcagaaggcgtgggcgcgcacgccgctgtggaagcgcgcggagctcctgcacaaggcggccgccatcctcaaggagcacaagaccccgattgcagagtgcctcgtcaaggagatcgccaagcctgccaaggacgcgatctctgaagtggtgaggtcaggggatttggtgtcgtacacagctgaggagggtgttcggatactgggggaaggcaagctgctggtgtctgatagcttcccgggcaatgaacggaacaagtactgtttgagctccaaggtacctcttggagtagttttggcaatcccaccatttaactatcctgtcaacctagcagtctccaagattggcccagcactaattgctggcaatgctcttgttctgaagcctccaactcagggagcggtggctgcactacatatggtgcactgcttccaccttgctggtttccccaaaggcttgatcaattgtgtcaccgggaaaggttctgaaattggtgattttcttacgatgcatcctggagtcaactgcataagttttacgggaggtgatactggtatagccatttcaaagaaggctggaatggtcccgcttcagatggaacttggaggaaaagatgcttgtgttgtgttagaggatgcagatctggatttagtggcagcaaatatagtaaaaggaggcttctcttacagtggccagaggtgcactgctgtgaaagtggtgctgatcatggaatccgttgctgatatcgtggtagagaaggtgaaggccaagttggcaaaactgacagttgggccacctgaggctgactctgatatcaccccagttgtaacagaatcctcagcaaattttattgagggtttggtcatggatgccaaggagaaaggagcaaccttttgtcaggagtacaggagagaaggcaaccttatctggccgttgctactggatcacgtccggcctgacatgaggattgcttgggaggagccatttggccctgtcttgcctgtgattaggatcaactcggtcgaggaaggcatccaccattgcaatgccagcaattttgggctgcagggatgtgtattcactaaagatatcaacaaagcgatcatgatcagcgatgcgatggagaccggaaccgttcagatcaactctgcaccggctcgaggacctgaccatttccccttccagggcttgaaggacagtgggattggatcccaggggataactaacagcataaacatgatgaccaaggtgaagagcactgtcataaacctaccatctccatcctacaccatgggctga</cdnaseq>

Protein Sequence

<aaseq>MAAVAGTGVFAEILEGEVYRYYADGEWRVSASGKSVAIVNPTTR LTQYRVQACTQEEVNKVMETAKVAQKAWARTPLWKRAELLHKAAAILKEHKTPIAECL VKEIAKPAKDAISEVVRSGDLVSYTAEEGVRILGEGKLLVSDSFPGNERNKYCLSSKV PLGVVLAIPPFNYPVNLAVSKIGPALIAGNALVLKPPTQGAVAALHMVHCFHLAGFPK GLINCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMVPLQMELGGKDACVV LEDADLDLVAANIVKGGFSYSGQRCTAVKVVLIMESVADIVVEKVKAKLAKLTVGPPE ADSDITPVVTESSANFIEGLVMDAKEKGATFCQEYRREGNLIWPLLLDHVRPDMRIAW EEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAIMISDAMETGTVQINS APARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINLPSPSYTMG</aaseq>

Gene Sequence

<dnaseqindica>303..456#924..1117#1224..1352#3007..3126#3206..3342#3424..3579#4020..4398#4496..4612#4713..4826#gagaaaaaaaaagtaaataaaacgaacaggacgcgaagacgaaaacccccctcgcctctcgtctcttttcgtgctcctccgaatccggtgggtcccacctccctcaccacgcgtccccggccgatcacttcgcctcctcctcctccgctctattaaaccctccttcggccaccgcgcctcctcccctctccaccactcgcgcccccatcaccacccactccactccctcctcccccgagcccgagtgcctcaccgccactagctagcagcagcggcggcggcggcggagaagaggaggagatatggcggcggtggcggggacgggggtgttcgcggagatcctggagggggaggtgtacaggtactacgccgacggggagtggcgcgtctcggcctccggcaagtccgtcgccatcgtcaaccccaccacccgcctcacccagtacagggtgcaaggtgggtttcgcttgcatgcttgctgctctgagctgctactactctgctgctactgctggtgggatgattgccttcccggcttatagttgatcggctgggtggatattggatatgattgattgatcgacgatttgacggcgaccatccctttcgatatttacgaagttaattacggctaagttgatcggcgccactaattaactggagtaactgcgtgcgagctcgccttctttaattctgatagctccccttacctaattggttttccctttggattctcaattgctccctgatttggtgaccggtgaatttcccatcttgtcggcgcaagaacatgcctcggattcatcgccggcttcattcttgcggctgtaattcgagtgttgctacgaattgcgaaacgagttgactttgaacctgatatcacaattagctgagaaaatttgggggtccttttgtgtgtccagcatgcacccaggaggaggtgaacaaggtgatggagacggcgaaggtggcgcagaaggcgtgggcgcgcacgccgctgtggaagcgcgcggagctcctgcacaaggcggccgccatcctcaaggagcacaagaccccgattgcagagtgcctcgtcaaggagatcgccaagcctgccaaggacgcgatctctgaagtcagtggcaatttcagtttgtacttggtgaattttagtgccattcttcatctgaagcgaagctaactgacaaagatggcttgttgtgttttttgagttttgacaggtggtgaggtcaggggatttggtgtcgtacacagctgaggagggtgttcggatactgggggaaggcaagctgctggtgtctgatagcttcccgggcaatgaacggaacaagtactgtttgagctccaaggtatgtgttgcattgctagattcagtcgactttcggttaagtttgtttgccatgttgtttctgtctctcattttgactagaaatagcgatgaaaaaaaagaagcttgtagtatttcagtgtttgtgtctggtggctgttgttaattgatcaacgggcctttgttgactggcagattgacaaaaagttgatgccttggaggcacctgtctaaatcaagttttaatatgtgttacctgtatgataaaatgaggttgatataaattatgcagctaattgacacgtataatggaatatggtattatggaatattccttggatgctagtggtactagtagcccatgtcattctggtttctttatcgtcatgaggtgacctctgaaattagcacttctccctgagtctaggatcactgatcgggatgggcatgcagtgggactgcatcttaagggtcaagattatcagttacagtaacattactacagtaaactatggtacagtagagtctgcagtacctggataaatccactcgaagctgacacatactcacactaccgactgcagcaaaaccaaatccctgagtctgtgtctttcccttgctgatctttctcctctatctgtctagtttttggatattgaacataaaagaagtgcttctgatacttgtgctcatttggccaaagttaaacaaaattgggcaggtgtcgacgtgactagccataactttggcaaaattcgctgtaatccagaccgaccacagctcaaacaagcttggaatgaaaccattccgtatttgatactgtcttcaactggaaatctaggattgccggttacttgtgaggcctgtttccactggttttcaaaatctgaactctcaactgaatatattcttgtattttccaatgatttgcagaagcataaaaattaaaatataggttgtgattctgtgaacctttgattctttgtgattggtatacagtagttatccccactttagtttgttcattgctattttagttgagttatagtaatagccctgtggtgaacttgaactaatcattgagtttggtgtgtaagtgtaactggtactttctaaatgaacttccgtggcccattttatcgttgatgtcgtgaaattagatacttctcatagaaacaaagtattagatgacaggaaaacattcagctatggttgttgctcctgggtccttttcagagattgttagcattgtagtgtgattagatctttggccatctgactctgtgcattaaattaaacatagtttcaaagtcattattccttagtactaattatcaatacctggatggttttgagatgtgaatatgctgctatatttcttcaataggattttcagtgatatggtttgttcaagaaactaatttccaacgattgtgattttctgatcatctttttttttaatctttagaagataacggattgttgaaactgagtatcatgtactctattgcatgctctagaatgtatgttcaagaaaaattttcatgagtcctaagatgaatattatggttgatacatttgactatcaatgctccagtgaatttacttaatatcctgaaattgatgatccatcattttgtttccttcggtatctaattcagtgtcctattcatgcaggtacctcttggagtagttttggcaatcccaccatttaactatcctgtcaacctagcagtctccaagattggcccagcactaattgctggcaatgctcttgttctgaagcctccaactcaggtatatattcttttatgtaaaaagacttgcctatgtttgaagtaaaacatacttaaatggtgtactactgttcaaccagggagcggtggctgcactacatatggtgcactgcttccaccttgctggtttccccaaaggcttgatcaattgtgtcaccgggaaaggttctgaaattggtgattttcttacgatgcatcctggagtcaactgcataaggtaataatcatccgctcctatttctggcatatgcagattcaataagacacagactaaacagtaaacacttatgccatgtagttttacgggaggtgatactggtatagccatttcaaagaaggctggaatggtcccgcttcagatggaacttggaggaaaagatgcttgtgttgtgttagaggatgcagatctggatttagtggcagcaaatatagtaaaaggaggcttctcttacaggtactaaacaatgaatttgattgatcgatctatgggttagaacaacgtttatcgtgttgtttcatttgatctattagatatttggacatgtcaaaatatggataccacaattccttaaaaaagtgaaatcagccacgggaaatcataaaaactttcagataagttttagctaacagaacatgacgtgtggcatccaagtagtgtcatcatgcatatcagataatgttgccatatgcttttccttgcttccatccttgtaccatactatattatttaaatagttctatacacccatatttcatctttatgtgccattttcttttgcttttctattattttccatgcttggccctagtaactatgcgaggacagaagtcttaactgaatttgcatcaaatcatactctggatttctactgacatttcttatgatcaacgtagtggccagaggtgcactgctgtgaaagtggtgctgatcatggaatccgttgctgatatcgtggtagagaaggtgaaggccaagttggcaaaactgacagttgggccacctgaggctgactctgatatcaccccagttgtaacagaatcctcagcaaattttattgagggtttggtcatggatgccaaggagaaaggagcaaccttttgtcaggagtacaggagagaaggcaaccttatctggccgttgctactggatcacgtccggcctgacatgaggattgcttgggaggagccatttggccctgtcttgcctgtgattaggatcaactcggtcgaggaaggcatccaccattgcaatgccagcaattttgggctgcaggtgcacactcacatacatgatagaaatggacattgatgtttgttacaacatgaatatcattgtgcatctgattcatctatgcattcttccatttcagggatgtgtattcactaaagatatcaacaaagcgatcatgatcagcgatgcgatggagaccggaaccgttcagatcaactctgcaccggctcgaggacctgaccatttccccttccaggtattgttaccatgccattgactcggcttgccatcattttgttcaatttaccttttgctttcttcagttgtttgtaatttctatggggtttggactacagggcttgaaggacagtgggattggatcccaggggataactaacagcataaacatgatgaccaaggtgaagagcactgtcataaacctaccatctccatcctacaccatgggctgaggtgttccatatagatgatcagatttctataaccacatgagtacaatgtagagaattcaaatgttttgtaaccacgtgagctttgtacgctatttgcaccacagttctccctgtatgttgttggctcttttacaattaagaataatgcatgttgaagtatg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0440800, RefSeq:Os08g0440800