Difference between revisions of "Os08g0442350"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0442350| Description = Protein of unknown function DUF593 containing protein| Version = NM_001188671.1 GI:297726472 GeneID:9266170| Length ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0442350|
 
GeneName = Os08g0442350|

Revision as of 20:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0442350

Description

Protein of unknown function DUF593 containing protein

Version

NM_001188671.1 GI:297726472 GeneID:9266170

Length

3448 bp

Definition

Oryza sativa Japonica Group Os08g0442350, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21643144..21646591

Sequence Coding Region

21644504..21645976,21646060..21646083

Expression

GEO Profiles:Os08g0442350

Genome Context

<gbrowseImage1> name=NC_008401:21643144..21646591 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:21643144..21646591 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagaaactgaagatactcagttacaaaaagcaatattcgcacagtacattatgatgaagaagttattcatggagttggaagaggagagagaagcttcagcaacttctgcaagtgcagccttgtcaatgattcgaaagcttcagaaggagaaggaggagcagaggatggaagcatggcagtacaagaggatagctgaggaaaagattagccacagtgacaaagcactggagattctacaggaagtccttcaacagaaggaactggagaatttttatctgagaaaccaattgctggtgtataaacacaagctattggatgttggtattgatgagtgtgatattgcagacgagacgataactaacaatataccattatttgaaagcaaaaccgtggagaatctttgtcgtagcatcaaaaggaatttctctctgccaactttgcagatgaagaaactttttgccgaaaaggacaccgacagaaatgttgaatcaacaaagagcagattaggtggctttgtttgtaatttgagtgaagatgaattgaagcatatttctggaaatgctagtgacttcaaggctctagaggttcagaaaagcttgctgacagatggggatgccacagaagaacatggagaagaaccaaatcctccaagcagtgatctttctcaacaacctcatctcttggaagagtcaagttgttcctcctcgttgttgagtaatcatagagatacatccagtgaaagagcaatacaggttggggaaaatgcggaagatacacgacatggtgatcaactcaagcagtcacattcaggcattggaaaggaagaagtacaatcacatcccttggaagagtcatcaagttgttcctcgttctccacatcgagtaatcacagagatatatgcagtgaaagagaaatacaggttggaagaaacgcagaggatgcaccacatggtgatcaaaccaaagagtcacattcaggcattgaagcggaagaggttgcagttcatcctataagtgacatcgttgacacaatcaagattcaagaaagaagccaaggagtagaagaatcctcatgcactgcaaatgaaatcatcacaaaggagtcagaactttctcccaaggacgttccgaaagagcggcggcctcaggctctatccaagttatctgcaacaagaaaagttggctccatgaacaacctctacaggaatgtccatgtaatcaccgataagagttcgacgccacgaggaaagaattcaacgccacgagctggcactgagaggaccagatcaaggctgaagcgggtgcagagcgagaagatggttgagatgaatgacaccaggaaaaacaaggagcagatcataatgctcaaggaggtgtacgagcagcttaacatgatagaatcgcacatgaggccttcgacttcacaggagacccctcggaatgaccaatccttggaatctgtcttggaggcggctctgtccttctccttatag</cdnaseq>

Protein Sequence

<aaseq>MAETEDTQLQKAIFAQYIMMKKLFMELEEEREASATSASAALSM IRKLQKEKEEQRMEAWQYKRIAEEKISHSDKALEILQEVLQQKELENFYLRNQLLVYK HKLLDVGIDECDIADETITNNIPLFESKTVENLCRSIKRNFSLPTLQMKKLFAEKDTD RNVESTKSRLGGFVCNLSEDELKHISGNASDFKALEVQKSLLTDGDATEEHGEEPNPP SSDLSQQPHLLEESSCSSSLLSNHRDTSSERAIQVGENAEDTRHGDQLKQSHSGIGKE EVQSHPLEESSSCSSFSTSSNHRDICSEREIQVGRNAEDAPHGDQTKESHSGIEAEEV AVHPISDIVDTIKIQERSQGVEESSCTANEIITKESELSPKDVPKERRPQALSKLSAT RKVGSMNNLYRNVHVITDKSSTPRGKNSTPRAGTERTRSRLKRVQSEKMVEMNDTRKN KEQIIMLKEVYEQLNMIESHMRPSTSQETPRNDQSLESVLEAALSFSL</aaseq>

Gene Sequence

<dnaseqindica>1361..2833#2917..2940#aatagacgctaagctgattacctgcacttctccctagcagggaggaaggaatggcagaaccattggagaattggatctttggctcatcgttggggggtttcaaatatcggtgagtttgtctgggcttcatgtactccaacttgtcgttgcttattcaaaatttgttttctatatccaattgttaatccagtcatgtcaaattttgtgctcaactagtggagtaataaattatcaccacaacatccctcaacacctctgggaatcgaatgcatgatctattgtattaaccctgacagcaaaatcataacagaattcttagtcaatttgaactcttacattagtgcttcgttatattttttcagcacggctgtcaattttagatactgaattccagtttttcaatttattgcaatacttttggcatctaattagcttttatttagtcaatgtgcattatgttatgagcatagaaacattaaccctccatagaaaacatatttcgttaatctgctatcttctcgacatcttcgtaccacctttgttttgtatattctttcctcttctttggcctttctaaatgcgcttgattgacgcttttcaaattattcatagctaccatgggctaatccatggaacagccaaatggtgctttttcttcaaaagcatattgtcttgcctagttttaatttggtcctccactctcaatatatatatatgatcctgttagtcaggaaatatgtggatcatgaggttatcatccttgccaacagttatttttatttaaatttttaacatgtaagattcaattttccacattttaaattgaatacgaatatatatatatacacgtaacatgctacgatgctattaatatcatctctttctcttattcttcatggcaggatcacacattttaggctaggggcataaatttaagcattataggatacatgatatgacttccgtagtgcgtacaatgtggatggaagttttaccctatgatagaaatattaacacatcctggattaagttttagtaggtgcaaaaactgaaactcatttgtgttatttatgatatcacatatacaattacataatcaccaaactactagaaaggaatcatatgtacggtaatattatttttatggtgcggaagaattgtgacagtattattctaggctgagttgattttacacttcaaaatcaactccaattttttttcctttttcagcttcatccaatcctcgcatgtcttcagagaataaagtgaagtttttttaaatattgcaggttcaatagatgaatttaatagattctaaggcaaatagtaaaccatatactaatcagagcctttgagaaagatggcagaaactgaagatactcagttacaaaaagcaatattcgcacagtacattatgatgaagaagttattcatggagttggaagaggagagagaagcttcagcaacttctgcaagtgcagccttgtcaatgattcgaaagcttcagaaggagaaggaggagcagaggatggaagcatggcagtacaagaggatagctgaggaaaagattagccacagtgacaaagcactggagattctacaggaagtccttcaacagaaggaactggagaatttttatctgagaaaccaattgctggtgtataaacacaagctattggatgttggtattgatgagtgtgatattgcagacgagacgataactaacaatataccattatttgaaagcaaaaccgtggagaatctttgtcgtagcatcaaaaggaatttctctctgccaactttgcagatgaagaaactttttgccgaaaaggacaccgacagaaatgttgaatcaacaaagagcagattaggtggctttgtttgtaatttgagtgaagatgaattgaagcatatttctggaaatgctagtgacttcaaggctctagaggttcagaaaagcttgctgacagatggggatgccacagaagaacatggagaagaaccaaatcctccaagcagtgatctttctcaacaacctcatctcttggaagagtcaagttgttcctcctcgttgttgagtaatcatagagatacatccagtgaaagagcaatacaggttggggaaaatgcggaagatacacgacatggtgatcaactcaagcagtcacattcaggcattggaaaggaagaagtacaatcacatcccttggaagagtcatcaagttgttcctcgttctccacatcgagtaatcacagagatatatgcagtgaaagagaaatacaggttggaagaaacgcagaggatgcaccacatggtgatcaaaccaaagagtcacattcaggcattgaagcggaagaggttgcagttcatcctataagtgacatcgttgacacaatcaagattcaagaaagaagccaaggagtagaagaatcctcatgcactgcaaatgaaatcatcacaaaggagtcagaactttctcccaaggacgttccgaaagagcggcggcctcaggctctatccaagttatctgcaacaagaaaagttggctccatgaacaacctctacaggaatgtccatgtaatcaccgataagagttcgacgccacgaggaaagaattcaacgccacgagctggcactgagaggaccagatcaaggctgaagcgggtgcagagcgagaagatggttgagatgaatgacaccaggaaaaacaaggagcagatcataatgctcaaggaggtgtacgagcagcttaacatgatagaatcgcacatgaggccttcgacttcacaggagacccctcggaatgaccaatccttggaatctgtcttggaggtaacttgttaaattttcaacttgttatgaaattttacttttgtagagttctaacatgtctaatcatgccaattttccaacaggcggctctgtccttctccttatagctagacccttgtggcctctactctaccatctgaacttctgaagcatatattcagaggccacctccagttttgaggcggccatctatcaggaacatctcttccatgaatacccaacaaggggaaatgcatagagtttttatatgcagtgtaaaactgcaaactcccatggtggcgttctttgagaagtctcatacacacactcatctatcaaggcctccttcgagcggaggattttcgaagaaattctgcaggaattgaactaattcctgtaaaattctgtgaagttttcgcgttcgggagtccaaatagaaagaaatctaggtgttgggtctgtgggctgtggcctgacgccccacttcggcaaccaggcatccgttgtagcaacgttcttttcacagtggcagcggccaatgcagccgttatgttacttgtgtgagaaagttttacggttctacagagacaattttttttaccttatcacactaaatatagttaatgccatttctct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0442350, RefSeq:Os08g0442350