Difference between revisions of "Os08g0482100"
(Created page with "{{JaponicaGene|
GeneName = Os08g0482100|
Description = LETM1-like domain containing protein|
Version = NM_001068602.1 GI:115476941 GeneID:4345857|
Length = 9175 bp|
Defin...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0482100| | GeneName = Os08g0482100| | ||
Revision as of 20:51, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0482100 |
|---|---|
| Description |
LETM1-like domain containing protein |
| Version |
NM_001068602.1 GI:115476941 GeneID:4345857 |
| Length |
9175 bp |
| Definition |
Oryza sativa Japonica Group Os08g0482100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:23922304..23931478 |
| Sequence Coding Region |
23922443..23922492,23923082..23923580,23924149..23924240,23924818..23924982,23925064..23925451 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:23922304..23931478 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:23922304..23931478 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgacggcggttgggtcgcagccgcgcgcggccatgtgcggtgccagcacatcgaagatttacactctggagaaagtatatggattcagattagtatgcagaagtgtggttgatctgaggagtcaaaaatttcatacacgtgtttataagagaaagagctatttcaggagttcagcatcagaatgtgagaagatcattcacagtgctagatggctagaatttaggagacagagggtagcatttcagagaactagaaggacaatccatcttattcctttggcttctcaagatgatagcagtggtttatctgttaacggatccccacaagttgattcggcaagcgagatggatgatataagggtgaaattggttaaagcactacaaagcgaggatataagcactggccttgtccaatcaatacatgatgctgcaagatctattgaattggctttcttagatcacagcaaatcatcaaaaaactcttggtttccaaaggaatggcttggtgtggataacaatgaatggataaaaccactctcttaccaggctgctgtcggttcattgttgcaagcagttattgatgtttcatctaggggaaatggcagagatagagatatcaatgtatttgttcagaggagtttatcccgcctacttagttctctagagggtgctatccaaaatgagctgtcgaaaagggaacctacattgtaccagtggtactcatctgatcaaaatcctttggttgtgagaacatttgttaactcttttgaaaacgatccacggtttaactctgcaacagcaatatgccatgaacgccagcaaatgaatactagtgaaagtgacctttctctacttatgctaggtttgacatgtcttgctgctatcacaaagcttggatcaacaaaagtttcttgtcagcagttcttttccatggtccctgatatcattggtcgattcatggatatgcttcttgaatttgtccctctaagtaaagcatataccttgacaaaagatattggtcttcagagagaattcctttgcaattttggtcctcgtgctgctgaccctaagttttccagtgatcgtgaagttgagatatcgttttggattgatctggttcagaaacagttgctacgggctcttgatcgtgaaaagatatggtcaagattgacaacaagtgaaagtattgaggttttggaaaaggatttagcaatttttgggtttttcattgctttaggcagaagtacgcaaacatatttgtcttccaatcatcttaccaatctggatgattcaatcaatgatattgtaaggtatcttattggtgggagtgtgttatattatccacagttgtcttcgattagttcttatcagctgtatgtggaggtagtttgcgaagagctcgagtggcttccattttacagtggtgatgtgccagctgcaacaattgaaggtagagaggatgtgcataaaggagaaataatatcaagagtgctaaatgtgtgctcttattggatgactagttttataaagtacagctcatggcttgagaacccttcaaatgtaaaggcagccagatttctgtccaaggggcattccatgttgagtgattgcatgaaggaactggacttaacaaagtatgatatgccaaaagaccaaacctttccagaagccaaagaacacttggttgctaggacagagctagcctcttttgacaagtcacttgaaagtgttgaggaagctttggttaagttagaagatttgctccaagaattgcatctctccagttccaactctggtaaggaggatctaagggctgcatgttctgatcttgaaatgattagaaggctgaagaaagaggctgagtttcttgaggcttcctttcgagcaaaaacagaatttcttgaggctgatgctagtagcagaccattatctcctgctgtcgaggaaggccgtggaaagacagctagcaatgctaatgagagctcaacaccacaaaaaccagcaaacagagtggagaacaaacgtcgtccaatttgggacctctttggtaggccttctggaaggagagttcagcttgtccaacaaacttcagatcaaaatgtttctgtcgctaatgtggataacaaagacacacaatcaaatgatatcctccggtttgaacagttaagacgtgagctgattgagttagagaaaagagttcaaaagagcgcagataatgctcaaaaggaggagacatatgtcgcaaatgaaacattggattcttccgtgtcatcatctcctgtatcaatgccttctggtccagctagcaagaaagaaaatgttattaccaaatcagtagagaaggttaaggaaaccacgacgactgttgtgcaagggacacagctcttagcaattgacacaggagctgctatgggtttgttaagaagagctcttattggggatgaactaactcataaggaaaagcaggctcttcaaagaaccctgacagatttagcctctgttgttcctataggaatactcatgcttctgccagtaactgctgttgggcatgctgctattttggctttcatccagagatatgtgccttccatg</cdnaseq> |
| Protein Sequence |
<aaseq>MATAVGSQPRAAMCGASTSKIYTLEKVYGFRLVCRSVVDLRSQK FHTRVYKRKSYFRSSASECEKIIHSARWLEFRRQRVAFQRTRRTIHLIPLASQDDSSG LSVNGSPQVDSASEMDDIRVKLVKALQSEDISTGLVQSIHDAARSIELAFLDHSKSSK NSWFPKEWLGVDNNEWIKPLSYQAAVGSLLQAVIDVSSRGNGRDRDINVFVQRSLSRL LSSLEGAIQNELSKREPTLYQWYSSDQNPLVVRTFVNSFENDPRFNSATAICHERQQM NTSESDLSLLMLGLTCLAAITKLGSTKVSCQQFFSMVPDIIGRFMDMLLEFVPLSKAY TLTKDIGLQREFLCNFGPRAADPKFSSDREVEISFWIDLVQKQLLRALDREKIWSRLT TSESIEVLEKDLAIFGFFIALGRSTQTYLSSNHLTNLDDSINDIVRYLIGGSVLYYPQ LSSISSYQLYVEVVCEELEWLPFYSGDVPAATIEGREDVHKGEIISRVLNVCSYWMTS FIKYSSWLENPSNVKAARFLSKGHSMLSDCMKELDLTKYDMPKDQTFPEAKEHLVART ELASFDKSLESVEEALVKLEDLLQELHLSSSNSGKEDLRAACSDLEMIRRLKKEAEFL EASFRAKTEFLEADASSRPLSPAVEEGRGKTASNANESSTPQKPANRVENKRRPIWDL FGRPSGRRVQLVQQTSDQNVSVANVDNKDTQSNDILRFEQLRRELIELEKRVQKSADN AQKEETYVANETLDSSVSSSPVSMPSGPASKKENVITKSVEKVKETTTTVVQGTQLLA IDTGAAMGLLRRALIGDELTHKEKQALQRTLTDLASVVPIGILMLLPVTAVGHAAILA FIQRYVPSM</aaseq> |
| Gene Sequence |
<dnaseqindica>140..189#779..1277#1846..1937#2515..2679#2761..3148#3219..3337#3469..3541#3619..3824#3914..3958#4064..4145#5154..5342#7443..7546#7613..7703#8041..8169#8369..8500#8723..8893#9116..9175#ccgctacttccctcccggtataaaccctatccctctccgcctccggcccatcgctttgtcgcgacgcgcgcgcatcgatcccaccgccggcgagggcgagcagtagcggcggcggcggcggcggcgggggcggaggctgatggcgacggcggttgggtcgcagccgcgcgcggccatgtgcggtgccaggttgggtcccccccccacccccatctcctctctctccttctggccgcggtgctgcgggccgattcgctggtttagtcgttgccgtttagctcgtgggtggatgggttgcggtggaatgcgctggttgcgagcttggattgtggaggggaggggtagaggtagtagggtcgttgaattcgtcactggctcactaagttatctgtgcgatttcggttcgggggcgtgcgccgccgagggatttcgtcaaatttggtgttgtaggttgccgttttggtgatggcgatagcattgcggttttgacggccggagctttgacatggccaattgaactgggatactttactactagtagtttcctcttctgttctgttgaggcttgcagttatgcacacggtgtgtttcccgtattgtgctttcagtggcaatttgacggcggatgcttattcctaaaacagtagcttgccagcgtttcttaaattgtttgctactggttttgattatggaataggtttcattgtacagtgaagttaataatatttttcttgctgtttcttattataatggatcaaatggttgaacgtgtttgcagcacatcgaagatttacactctggagaaagtatatggattcagattagtatgcagaagtgtggttgatctgaggagtcaaaaatttcatacacgtgtttataagagaaagagctatttcaggagttcagcatcagaatgtgagaagatcattcacagtgctagatggctagaatttaggagacagagggtagcatttcagagaactagaaggacaatccatcttattcctttggcttctcaagatgatagcagtggtttatctgttaacggatccccacaagttgattcggcaagcgagatggatgatataagggtgaaattggttaaagcactacaaagcgaggatataagcactggccttgtccaatcaatacatgatgctgcaagatctattgaattggctttcttagatcacagcaaatcatcaaaaaactcttggtttccaaaggaatggcttggtgtggataacaatgaatggataaaaccactctcttaccaggtacaggactgaactttcttcaggcatatatctgcccataaaatgatagtgaccattattcatgtcattgattaaatagtttctcttgacttttcccttttggccttccacgcagaaaactagtattgaaattttgtaagccagattttattgcatgcaccctactgtttccctttttttgtttagaaaaagaaaagatgatgtagtcaggatatcatccatagaggtcttatgaaatatggatgcctgtatagatgaatatgtatgttgaacttggtaaactattaattggttagcttttgttcaccccttttaggatattagtagtgctactctgccaccagaggaagtgttctgctctggtgtctggagtattattttcatatatgaagatgcagagtcttttaatcaacttagagccaatcgcggcaattgaaccttctttgagttgatgtttattagttctcacacataaatcttcagtaaaacaaatattagctgttgcgttctgaattttggtggcatgcaaactttttattgtctggtatctaaaataatctgtttgcaggctgctgtcggttcattgttgcaagcagttattgatgtttcatctaggggaaatggcagagatagagatatcaatgtatttgttcagaggaggtctgccctctagcacttgccttgattatcatgcctaattgctgacattatcctttttctcctggtgtgtttttaagactacaactatctatcatcttggagccaattttgctttttaataccttagagagcaaatggtgtgtaatgtacattttatgtagcttcctctgtatattaagttttcttggagctaattcctgtctcataagttgctttccatctatagcctaattattagagaaatatattcctccatttcttgactggtagatttcttaagttttaatgtcaataaaacatatgctgtcagaagagcatgcaaattaattgatccacttgattcatgggaaaaaaaagttactgctagagtctacaggtttctgctgtatttgcatttttgttgacccagaatgagccttctactggattcaatagtcaagcttacatgaacatagtattgacagcatgatgaagccaaatcagatctaacctctatgttgtacataacagttcaatttgtgattatagaacatgcctcttggtctcctatttaatcatatttaattttctgttgcagtttatcccgcctacttagttctctagagggtgctatccaaaatgagctgtcgaaaagggaacctacattgtaccagtggtactcatctgatcaaaatcctttggttgtgagaacatttgttaactcttttgaaaacgatccacggtttaactctgcaacagcaatgtaagttgtttacttctgttgggcttcatttgataaatgaactaatacattaacggataccttttcttttgttgcttgcagatgccatgaacgccagcaaatgaatactagtgaaagtgacctttctctacttatgctaggtttgacatgtcttgctgctatcacaaagcttggatcaacaaaagtttcttgtcagcagttcttttccatggtccctgatatcattggtcgattcatggatatgcttcttgaatttgtccctctaagtaaagcatataccttgacaaaagatattggtcttcagagagaattcctttgcaattttggtcctcgtgctgctgaccctaagttttccagtgatcgtgaagttgagatatcgttttggattgatctggttcagaaacagttgctacgggctcttgatcgtgaaaagatatggtcaagattgacaacaagtgaaagtattgaggttggaacaaaagatatttcgtctagctttatgaattctccttccaaaataactattttccttactgcaggttttggaaaaggatttagcaatttttgggtttttcattgctttaggcagaagtacgcaaacatatttgtcttccaatcatcttaccaatctggatgattcaatcaatgatattgtaaggtgtgaatgatgcgaattttgaattgccatttgctcgatgaaattatgtttctgtacataagctacagtataactgttttcttgcgtaattatgatgtagctctcaccttaacaagcttacaatcatccaggtatcttattggtgggagtgtgttatattatccacagttgtcttcgattagttcttatcagctgtatgtggaggttagtatgcaggcaatacaccgagctctcaatgctatgcaccttttttgtgtttttatgaccttttcaccttccaggtagtttgcgaagagctcgagtggcttccattttacagtggtgatgtgccagctgcaacaattgaaggtagagaggatgtgcataaaggagaaataatatcaagagtgctaaatgtgtgctcttattggatgactagttttataaagtacagctcatggcttgagaacccttcaaatgtaaaggcagccagatttctgtccaaggggtacatccaaattcagtcatgctctctcacattttgccgcagatatggatgcgaaccaacgtttctaatatatggtcaaatttttgtaggcattccatgttgagtgattgcatgaaggaactggacttaacaaagtaaacatataattctgatgtttatattgttatttgttatgttacttgggtatatgtttgtacaattgtaagaatattattatttatctgctcattctgatgcaggtatgatatgccaaaagaccaaacctttccagaagccaaagaacacttggttgctaggacagagctagcctcttttgacaaggtatctgttacatgatgcactttaacgttactagtatttcttctggttctcacacatcccaacaatagtaattctcagtactgttagttaaattattattttttgtgaggagttagttaaattattgtgcatttgacatgttccaagatgatgttgctgatatcagtgctaaactgctaattatattatagtttcttcatggaacctatatgccagtttcagagggaagcggtggtgcatgtgtgtgttttggggttttgttttggtgtggtgggagggggtggagggtgggatggatggtgagaggccttatattctcatggctgttgccagaatattggtgtggacaagaaatatgactagtggacttatgttatttctctgtaagcaaacaataagatgttaagattgctttcatgagtagcccctaatgagaatatataatatttggtgaaaaatagccttgttggataagggtaaactgtgaaagaagctccaagcaacttgatgcactgctggcactatgcgaaacatcattgcaggcctcatgctgatagtaactcccggccataacactataagctcagacatcaaattcattacgatgcaaggctgcacatgcagggagatgccaccgtctccttttgatatgcttacacattcaaagcgtgacatgtattagatgtattctgagatatgcaagagatgaaggattgatccatttaatgtatatctgtttacaattaataactgtacaagatcatatgttagatgtgttttttttttaaaaaaaatatttttcggactgttaagttatatgcatttttatgttctcaattagacttgccatttgccaaaaagcttatggtcagtcttacttatgtttgtgcttagttgtgtatgcttgttttcagtttacaatggcaatttgaacaaatgctaatttaattacttctgaatatatattgtagtggtgaaaatttatgaagttagtctcaataattgcagtcacttgaaagtgttgaggaagctttggttaagttagaagatttgctccaagaattgcatctctccagttccaactctggtaaggaggatctaagggctgcatgttctgatcttgaaatgattagaaggctgaagaaagaggctgagtttcttgaggcttcctttcgagcaaaaacagaatttcttgaggtgagcttaattatcatacaaccttttactagcctgcatttcatctggaaaaggaattactacaagtatgtggacactttaatttctccatcataggactcaggagagtgcattccaataactgcaatggctattaagggccagctatttctcaataatagaaacaacatcctcaatgactgaaataacaattgtcacatgtatagattagatggccctagacccaagcaacacaaccatgctgatgaccaggggccacactacatgggctatggatgattacctagtccaaacacttatgattatttcttgcttaatctgattaaaatccagatatatttttaaatagggcagcattaaccacgcaacgagccacatatcttatctccttatcttaaccaactatacatgttctgcatccagctgcctcatgcttcctaagctcctgttgggctgttcatgacattccattggctgtaaggcctcttgccttgatcacatctccaataatgggtgtatcatggaacttcacccttcctttctagctgtttgtcctcaacctgcagggtggtgaccagttgcaccccttgaaatctccacggtgaagaggttgcagtgtgggcatcctgtcatgtgagagcaccaagctgtcaagatcacacagactgtgcttctgaaggttgtcaatgtatctaccatggccggttgctgcacctctaccagctacagtcacaagatcaacaggtggtgcagtcatgccaaaaagtcttcattggcatgccccatggggctagcgcttttcaagtcattgatgttgtcagcatggaagtcgctggatggtgaagtgttgaaaccacatcagggctgcctttttggcgtccatggggcttgcaagttgatggcaaagccagtagttgtgctagcgataaagtgaatgatagttgcagccgttctgatggtggttttgttgatctttggtgttgcctggtagggctgactctttctgcaccagctgtggtggttgacgccaacaccaaattatcacatgccctgattatatggccctggacccaagcagtgcaaccagctgatgactgacaacatcaccacaagggcagggatatacgagagtaggaagtcttgaaatatatttctccttagtccttaatgatggcttggcttatttagaccacctcctaacatgtgctaactaatacagtataacagttacattcctaacagcttcactaactaatcctatctttactataaagttgatgcccactaactcctaaagctcaacatgcaagtgtgccacatcatcgcatactagcaattatcatccagagtattttaaatcacatgcaagtggacccactagcagttattatctagagtattttaaatatcatgcaaacatgacatatcatttacaattttgttgtatttttagaactcaatatgcaagtaatgtcaaatcattatctccacatcattttcacattatttaaacatgtacatctataatctataatttctataatgaataacatgcatttatccacttatcccgcaacaaagcgtgggtaccaactagttacctaaagataacatccgcttcaaataaactgataacaactaaagataacacaagtggaaagtggtatcatctccttcaacgtcagcctcctgacgctccagttggccatgcattcacgtagatatgttgcacattttagatatttaaaaccgagatattatttctttagggacattctgttgatataatttaggttcttctactcccccgagagtagtttcattgggtggactgtttaagttttgtttactgtgtttaaactttaaaggtgtgtcagttctccttccactgattaacatggttgacattttacacaacgaagttagttgattccatgtagaaccaccatatttctaagattcccacccaatatttgataatgatttttttttggtaatatgtttgtgagtcaacataatagaggttccatatgttctacttggtacaactgttcattactactatgatggctatcctaaagttttctgatggtcaattaggctgatgctagtagcagaccattatctcctgctgtcgaggaaggccgtggaaagacagctagcaatgctaatgagagctcaacaccacaaaaaccagcaaacaggtaacattctgctgtagtttctgtgatttcagggtggataataaccgctattgtttttttcaccagagtggagaacaaacgtcgtccaatttgggacctctttggtaggccttctggaaggagagttcagcttgtccaacaaacttcagatcaaaatgtatgcgttctgtagcatgcattactgtgcatttaataattttcaaacaacaatagggtaaaacaatagaagctgccatcttgcaatgaatatttgagctgtccttttagcaattatatttcgagcaaattttttaggtgttgtatttaacaatgatggggatcacaaaaatcatcaatgattagtgatttattcttactaacagtctctctgtatagtatataatagttgcggaagcatgtattctgttcttgagaacaacaccattgatgcaaagatatcttgttgcaccatgttcttacttaacagattttacctctttttttttctcataaaggtttctgtcgctaatgtggataacaaagacacacaatcaaatgatatcctccggtttgaacagttaagacgtgagctgattgagttagagaaaagagttcaaaagagcgcagataatgctcaaaaggaggtatgcttcttaatatatgctttctaaatgttgacatgaatgcacctggtatttgagttagcacttaagcaacaatgctggacagagtactttattctgagttatgtgtttcatatgatattctcactattgcttttgaccataaatgcacatccgttttcaattttgaagaattatttattgttttgtcattttccaggagacatatgtcgcaaatgaaacattggattcttccgtgtcatcatctcctgtatcaatgccttctggtccagctagcaagaaagaaaatgttattaccaaatcagtagagaaggttaaggaaaccacgacggtaaggccatttacattttcttgaaaatatatttggtattggccctacataatttaattagttgccatgaagcctttgtgccaccagggcgcatcatcatatttgaatgcttccattactgaaatccagaatgcagctctcctccatatttgagggaaaaaaaatgtctagaatgcagacctgcaacttatttcctttttctctatttttttccctacacagactgttgtgcaagggacacagctcttagcaattgacacaggagctgctatgggtttgttaagaagagctcttattggggatgaactaactcataaggaaaagcaggctcttcaaagaaccctgacagatttagcctctgttgttcctataggaatactcatgcttctgccagtaagtatttgttgtacttcgatttacccctcctgaacaagcataaagccttctaggcccagactgttgtttatttcaattttggtttcagaagcctgtcttctttacttcatccacattgactaaagataaccagtcatgttttttagttagtgaactttaatgttcagtgcaaatatcttcatggatacagcattgtaaacaagttcataatgttcccaggtaactgctgttgggcatgctgctattttggctttcatccagagatatgtgccttccatg</dnaseqindica> 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| External Link(s) |
