Difference between revisions of "Os08g0487700"

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(Created page with "{{JaponicaGene| GeneName = Os08g0487700| Description = Similar to TA1 protein (Fragment)| Version = NM_001068637.1 GI:115477011 GeneID:4345892| Length = 2009 bp| Definiti...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0487700|
 
GeneName = Os08g0487700|

Revision as of 20:51, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0487700

Description

Similar to TA1 protein (Fragment)

Version

NM_001068637.1 GI:115477011 GeneID:4345892

Length

2009 bp

Definition

Oryza sativa Japonica Group Os08g0487700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24209903..24211911

Sequence Coding Region

24209903..24210244,24210347..24210580,24210734..24210799,24210908..24210976,24211073..24211150
,24211272..24211466,24211798..24211911

Expression

GEO Profiles:Os08g0487700

Genome Context

<gbrowseImage1> name=NC_008401:24209903..24211911 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24209903..24211911 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgctaatggcggcaatgggtttggagtagagagcaacgcttcggctgtccatggtggcatggcgatggcttggcaatggcatggcggccagatgagcggcggcagctcgtgcgctgcggcgccgccgccggtgcaacagccggcgatggattctctcgcgtggtcgtcgacggtctcgccgagcaccggcgctgccacggcggcgagcggcgccggcttcttgctgccaccggcagccgtgcgcggcggcttcggcagtttcccggtcaactccggcggcatcgtcgagccggccggtgactgctcgtcggagtccaagaagaggagatcagacgagattgctggaacggatcacgcgaacgcatcgaacgcgcttgccgattctgggaacgagaccgagtgtagcaaagatgtcaacggcgaagtgatcggcccgccggcgacggcggcggccggcggcaagtcgaaagggaagggagccaaggacgccggcgaggcgcagaaggaagggtacagccatgtcagagctcggaaggggcaggcaaccaacaaccacagcttagcagagaggctgagaagggagaagatcagcgagaggatgaagctcctgcaagaccttgtccctggctgcagcaaagtcaccgggaaggcgttgatgctcgacgagatcatcaactatgttcagtccctgcaaagacaagtcgagtttctgtcgatgaagctctcggcagtcaacccaagaatcgatctcgacattgaatcacttgtcaacaattccaaggatgttcttcgttttcccgggcagccttcctctgctcccatgggattctccttctccacggagatgatgccggggctacaattatcacgaccgggcatccttcagggaggtgtccatggcatgatcaatccagatgtgttcaccagcctcatgcagaagcagcagcaaaatgacaagggagcattcagagagcctcagatgcatcagactttggatggatcattccgtaacaccgcacaaatgccgtatccacaggtcatgagttcagaagagctaagcatcaggcaagatcaagatgggtttcacatgtga</cdnaseq>

Protein Sequence

<aaseq>MDANGGNGFGVESNASAVHGGMAMAWQWHGGQMSGGSSCAAAPP PVQQPAMDSLAWSSTVSPSTGAATAASGAGFLLPPAAVRGGFGSFPVNSGGIVEPAGD CSSESKKRRSDEIAGTDHANASNALADSGNETECSKDVNGEVIGPPATAAAGGKSKGK GAKDAGEAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGK ALMLDEIINYVQSLQRQVEFLSMKLSAVNPRIDLDIESLVNNSKDVLRFPGQPSSAPM GFSFSTEMMPGLQLSRPGILQGGVHGMINPDVFTSLMQKQQQNDKGAFREPQMHQTLD GSFRNTAQMPYPQVMSSEELSIRQDQDGFHM</aaseq>

Gene Sequence

<dnaseqindica>1..342#445..678#832..897#1006..1074#1171..1248#1370..1564#1896..2009#atggatgctaatggcggcaatgggtttggagtagagagcaacgcttcggctgtccatggtggcatggcgatggcttggcaatggcatggcggccagatgagcggcggcagctcgtgcgctgcggcgccgccgccggtgcaacagccggcgatggattctctcgcgtggtcgtcgacggtctcgccgagcaccggcgctgccacggcggcgagcggcgccggcttcttgctgccaccggcagccgtgcgcggcggcttcggcagtttcccggtcaactccggcggcatcgtcgagccggccggtgactgctcgtcggagtccaagaagaggagatcagacgaggtacacactcacttgctccccgtctcatcgcatcgatcaaaacattcttaataaaaagcttgatgaatcgtttgcacaattgcttgcaccggcatttgcaagattgctggaacggatcacgcgaacgcatcgaacgcgcttgccgattctgggaacgagaccgagtgtagcaaagatgtcaacggcgaagtgatcggcccgccggcgacggcggcggccggcggcaagtcgaaagggaagggagccaaggacgccggcgaggcgcagaaggaagggtacagccatgtcagagctcggaaggggcaggcaaccaacaaccacagcttagcagagagggtataccctacatacaaaatttgaacagtttcaaatttttttaaatattttttttggggggaagagaacagtaatatttacaaatttcttcaaactgatcacctgaactatgagtcaaataattgaagattgtggtgttatgtttcttggcagctgagaagggagaagatcagcgagaggatgaagctcctgcaagaccttgtccctggctgcagcaaagtgagcattctaacccagaactgaagctacagtgcgaaggtttctgaatcatatgtgaatttcataagaatggatggtaatttgtgtttctgaatttgattcgattaggtcaccgggaaggcgttgatgctcgacgagatcatcaactatgttcagtccctgcaaagacaagtcgaggtactgacatgatcatccacagggaatgactgcaatttcacctgacaaagcacaacgcaaacactgatattcggttttcactttccatctctgcagtttctgtcgatgaagctctcggcagtcaacccaagaatcgatctcgacattgaatcacttgtcaacaattccaaggatgtatggaacttgaaccatcttcccttcctcctctctgtttttcttcttcagtttgcttcgcgagaaatcagaaattcagaaatgtgtgcgacaagttcatcatatttcttgatgatttcaggttcttcgttttcccgggcagccttcctctgctcccatgggattctccttctccacggagatgatgccggggctacaattatcacgaccgggcatccttcagggaggtgtccatggcatgatcaatccagatgtgttcaccagcctcatgcagaagcagcagcaaaatgacaagggagcattcagagagcctcaggtttgcatctgatacatgccattgttatttgttagtatcacttcggctaagttatacaggaaggtttaagccattagaaagaactaggccagccaaataccattcagtttcatctagtttcatattattatatactctctctgtcccaaaatataacaatttctagctatgtatctggaatctggataaggagatatacatagctaaaaaatgcatattttagaaaggaggttgtagtacagtagcagtttgcaagacaaacacatactgttcaccattctacactcattgcaaacgtgatcatctgatgggctctctgattcttgaacagatgcatcagactttggatggatcattccgtaacaccgcacaaatgccgtatccacaggtcatgagttcagaagagctaagcatcaggcaagatcaagatgggtttcacatgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0487700, RefSeq:Os08g0487700