Difference between revisions of "Os08g0489300"

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(Created page with "{{JaponicaGene| GeneName = Os08g0489300| Description = DNA glycosylase family protein| Version = NM_001188709.1 GI:297726548 GeneID:9272626| Length = 2226 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0489300|
 
GeneName = Os08g0489300|

Revision as of 20:51, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0489300

Description

DNA glycosylase family protein

Version

NM_001188709.1 GI:297726548 GeneID:9272626

Length

2226 bp

Definition

Oryza sativa Japonica Group Os08g0489300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24274675..24276900

Sequence Coding Region

24274739..24275183,24275824..24275881,24275968..24276051,24276155..24276294,24276604..24276896

Expression

GEO Profiles:Os08g0489300

Genome Context

<gbrowseImage1> name=NC_008401:24274675..24276900 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24274675..24276900 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcaccacatcatcacatagcaggcaccaccatgcatttgagaggagccccaaccacagcatgatgaagaacatagcagacaggaacaagcatgatcttcttcagagtgccatgaaccatgcagcaagcaagtacatgcagaggatctaccctctggggatccagaggagcagctccaacctcacactctcatcactctccctgtcacagaactccaatgattcttcactcagcagctcaaactctagctgggagcccaaggtgcccctgctgtatggtggcacatttagcccctggggtgatgtgcttgtgtccctggagaggaggagggaagaagatgatgacaaggttagtgatcatgatgttgaggggggagaagaggattttgattgcagtgagcctgggagcttgcataggtgcagctggatcaccaagaacagtgatgaggcgtacgttcagtttcacgacgagtgctggggtgtcccagtgtacaacgacaaccgtctgttcgagctgcttgcgttgtcaggcatgctcatcgaccacaactggactgagatactcaagagaagagacatgtacagggaagcgttcgcggacttcgatcccagcacggtggcgaagatggacgagaacgacgtcgcggagatcagcggcaacaaggagctcaagctggccgagtgcagggtccggtgcatcatcgagaacgccaaatgcattcagaaggtggcgaaggagtttgggtcgttcagcggatacatatgggggcacgtgaaccaccggccgacggtggggaggtacaagcaccacaagtacatcccgttccggacgcccaagtcagaggcggtgagcaaggacctcgtccgccgcggcttccgcctcgttggccccgtcatcgtctactccttcatgcaggcctccggcatcgtcatcgaccacctcgtcgactgcttccgcttccctgaatgcctccacctcgccgaccgctcctggggcattaccaacgtcgctgcctaa</cdnaseq>

Protein Sequence

<aaseq>MLTTSSHSRHHHAFERSPNHSMMKNIADRNKHDLLQSAMNHAAS KYMQRIYPLGIQRSSSNLTLSSLSLSQNSNDSSLSSSNSSWEPKVPLLYGGTFSPWGD VLVSLERRREEDDDKVSDHDVEGGEEDFDCSEPGSLHRCSWITKNSDEAYVQFHDECW GVPVYNDNRLFELLALSGMLIDHNWTEILKRRDMYREAFADFDPSTVAKMDENDVAEI SGNKELKLAECRVRCIIENAKCIQKVAKEFGSFSGYIWGHVNHRPTVGRYKHHKYIPF RTPKSEAVSKDLVRRGFRLVGPVIVYSFMQASGIVIDHLVDCFRFPECLHLADRSWGI TNVAA</aaseq>

Gene Sequence

<dnaseqindica>65..509#1150..1207#1294..1377#1481..1620#1930..2222#attgcaaaaccacccattctccttgaatcttgcctccaaaaactcttgccacttagcattcacaatgctcaccacatcatcacatagcaggcaccaccatgcatttgagaggagccccaaccacagcatgatgaagaacatagcagacaggaacaagcatgatcttcttcagagtgccatgaaccatgcagcaagcaagtacatgcagaggatctaccctctggggatccagaggagcagctccaacctcacactctcatcactctccctgtcacagaactccaatgattcttcactcagcagctcaaactctagctgggagcccaaggtgcccctgctgtatggtggcacatttagcccctggggtgatgtgcttgtgtccctggagaggaggagggaagaagatgatgacaaggttagtgatcatgatgttgaggggggagaagaggattttgattgcagtgagcctgggagcttgcataggtgcagctggatcaccaagaacagtggtaagaaatggttattactactacttgctatatgtttttctttcttctgtgctaattttcatgcagtcatgcagatatgttttttggttttgtatttcatttggtggacagattctgatgaacaatcatctcagcctacttaacaacagtaggcagttaaaaagaatatgtacttgtcacctaaggcaagcatcagtttattgttaggaaaagtgaaggatgtcggataagtgaacatgcaagataaaaaaaacaaattagttaattagtgttggaccaacttatgagtgcaattagtaattaagtatgattcttcttttaaaaaaaagtaggtaacattaccctcagcagaacacaagtttgggactttggatatagcaaaagtcgacatcgacatcactggctgatgaagctctgattttgactaagtttcagtcatcacttgatgatgccttcacgaaaaatattcagttgacaatttcatcagaaagggacttctctccatattcttgtagtagcttttctttttggcacctgcttgcagtttgttgagcaaacataaatccaaaaggggagaaaagaagtacaagagctgaaaactgatcactaactgaaagtctgaaacccgtcaattgtgcagatgaggcgtacgttcagtttcacgacgagtgctggggtgtcccagtgtacaacgacaagtatgtactgcgtataaaataccattatttactgtccatttctacttaatttctgtatcttgatctatctttattgcaatttgcagccgtctgttcgagctgcttgcgttgtcaggcatgctcatcgaccacaactggactgagatactcaagagaagagacatgtacaggtatctgaatttctgaacattcctgtacgtgatttcttcatggttttgttctgtccaaactgggcgatggctgatgcatggctgttgggtgatctcgattcagggaagcgttcgcggacttcgatcccagcacggtggcgaagatggacgagaacgacgtcgcggagatcagcggcaacaaggagctcaagctggccgagtgcagggtccggtgcatcatcgagaacgccaaatgcattcagaaggcgagtacagcatggccacgatgaatcgttcataaaacttgccaagttttacttcaaaacattaaagaaaatgttaaaacaaatatgacatatattaaacaagggagaacaaacactccatcaatctcgaagaatcaatttcctataaagacatttgtctagatttgtaactaaaaatatgtcttttgggatagaattaattttctatagcctgcaattgatcttcttggatagatggtgtatgtcacaagattttaaagtttttgaaaatggactctaaaaatattaagcatacgcggatgagtataggtggcgaaggagtttgggtcgttcagcggatacatatgggggcacgtgaaccaccggccgacggtggggaggtacaagcaccacaagtacatcccgttccggacgcccaagtcagaggcggtgagcaaggacctcgtccgccgcggcttccgcctcgttggccccgtcatcgtctactccttcatgcaggcctccggcatcgtcatcgaccacctcgtcgactgcttccgcttccctgaatgcctccacctcgccgaccgctcctggggcattaccaacgtcgctgcctaatgac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0489300, RefSeq:Os08g0489300