Difference between revisions of "Os08g0500000"

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(Created page with "{{JaponicaGene| GeneName = Os08g0500000| Description = Similar to COP9 signalosome complex subunit 6a (Signalosome subunit 6a) (Fragments)| Version = NM_001068687.1 GI:1154...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0500000|
 
GeneName = Os08g0500000|

Revision as of 20:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0500000

Description

Similar to COP9 signalosome complex subunit 6a (Signalosome subunit 6a) (Fragments)

Version

NM_001068687.1 GI:115477111 GeneID:4345944

Length

3294 bp

Definition

Oryza sativa Japonica Group Os08g0500000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24769241..24772534

Sequence Coding Region

24769566..24769650,24769938..24769993,24770078..24770178,24770310..24770402,24770506..24770584
,24770665..24770726,24771104..24771197,24771921..24772009,24772111..24772534

Expression

GEO Profiles:Os08g0500000

Genome Context

<gbrowseImage1> name=NC_008401:24769241..24772534 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24769241..24772534 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aaaaccctcccctctctctctcgcctcaccaccgccgtcgtcgtcgccgccgccgcaaccctcgccgccggcgctaggctcgcgactccgacgatgtcggcgccatccgaccccgccgtggccacccacccgcaggcgggcgccgccgcggcggcgtcctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgaccaccacacccgcgtgaaggcccaggcggcgtgctccggcgacggggcctcgtctgcggcggcgggggggcagccgccgagggtgttcgggtgcgtgatcggggtgcagcgcgggcggacggtggagatcttcaacagcttcgagctcgtcctcgaccctgtctccgggaccctcgaccgcgccttcctcgagaaaaagcaggagctctataagaaggttttccccgacttctatgtgctgggttggtactccactggaagcgatgtgcgggacactgatatgcaaatccacaaggctctgatggacattaacgaaagtcccgtttatcttcttttgaatcctgcaatcaacctctcccagaaggatctccctgtaacaatttatgagagtgagttgcatgttatcgatgggagtccgcagctcatctttgtcagagctaattatacaattgagactgtagaggcagagaggatatctgttgatcatgttgcccatctcaaaccatctgatggtggctctgcggcgactcaattggctgctcatctgacaggaatacacagtgccatcaagatgctcaatagcagggtccgtgttatccatcaatatcttgtttccatgcagaaaggtgatatgccactggacaattcgctgcttaggcaagtctcaagcctagtaagaaggctaccagcaatggagtcagaaaaattccaagatgacttcctaatggaatacaatgacaccctcctcatgacttaccttgctatgttcactaactgttcaagcacaatgaatgagctggtcgagaagtttaacgcgacatacgagaggtcgactgccaggagaggaggccgaggtgctttcatgtag</cdnaseq>

Protein Sequence

<aaseq>KTLPSLSRLTTAVVVAAAATLAAGARLATPTMSAPSDPAVATHP QAGAAAAASSSSGLTFKLHPLVIVNVSDHHTRVKAQAACSGDGASSAAAGGQPPRVFG CVIGVQRGRTVEIFNSFELVLDPVSGTLDRAFLEKKQELYKKVFPDFYVLGWYSTGSD VRDTDMQIHKALMDINESPVYLLLNPAINLSQKDLPVTIYESELHVIDGSPQLIFVRA NYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRVRVIHQYLV SMQKGDMPLDNSLLRQVSSLVRRLPAMESEKFQDDFLMEYNDTLLMTYLAMFTNCSST MNELVEKFNATYERSTARRGGRGAFM</aaseq>

Gene Sequence

<dnaseqindica>2885..2969#2542..2597#2357..2457#2133..2225#1951..2029#1809..1870#1338..1431#526..614#1..424#aaaaccctcccctctctctctcgcctcaccaccgccgtcgtcgtcgccgccgccgcaaccctcgccgccggcgctaggctcgcgactccgacgatgtcggcgccatccgaccccgccgtggccacccacccgcaggcgggcgccgccgcggcggcgtcctccagcagcggcctcaccttcaagctccaccccctcgtcatcgtgaacgtctccgaccaccacacccgcgtgaaggcccaggcggcgtgctccggcgacggggcctcgtctgcggcggcgggggggcagccgccgagggtgttcgggtgcgtgatcggggtgcagcgcgggcggacggtggagatcttcaacagcttcgagctcgtcctcgaccctgtctccgggaccctcgaccgcgccttcctcgagaaaaagcaggagctctgtgagtgaaattccggcgaatcttctgcgctttttgttagggtttcggcgaaatctagtggtacgagggtttgattcgtgattgcggttgtggccgtgcagataagaaggttttccccgacttctatgtgctgggttggtactccactggaagcgatgtgcgggacactgatatgcaaatccacaaggctgtaagttcttgttctgttcttagggcaagctagcagaaagaagtaatctatctggtcagcaagtgcccaacctgtctcattatgacaatgtgcttggttgtttgctctttttacagaaatagaatatgggggcttggtgtaatgttgtttagttggcatggttggcagtgctagcatctaatatctgtggggtttctggttgaattctgaaagggatggtagaagaggacatggttttcctagttttgtggctacaccaaattatattgttatgaacatatactgtttattgttatgttatagcatcatattgggtggtggagcagatggtaggcgcataccgtgctatttatggaccaaagaatgttactatgtattcaaatattcaaattgtgcgatgcaattattctggccatataaattgatgctacaattttctaaaatatctgctgtagtcatgtgtcatgtattccaaaatgttttatgccttctttcattgccaatttgccagcagtagcagatagtagtgcttatgttgacattgcgtacatatattctctatgttgtgtttttactcaagtttctgttagcaaatgaaataggcatgactgttaactcttttataacctcattgcttataaacatatatattcttttgagatctgctctgtacattgtttttgttcctctttgtgttacttacttcttttttttattatccagctgatggacattaacgaaagtcccgtttatcttcttttgaatcctgcaatcaacctctcccagaaggatctccctgtaacaatttatgagagtggtaagtgaatctgacttcagcttgtatcattataaaatatattgcaattgatttcacagtttttatatggtttgggtttttgttttacttttaggtgtacgtcaattatgcatgtacctgagatgtactccaccttttacatattgcccactactcctagaagtcttttttcccccaaatgccaccttttagcatcacgtatatagcatgtgtgaccccttgatttctcagataattgactcaaaccagttcggtgttctttcatggtgctactgttattttattgttccatttctccgtctgtttattattctaatttcctctttaccattttctgttatttctttttttttgacatgattttctgtaatttcaagagttgcatgttatcgatgggagtccgcagctcatctttgtcagagctaattatacaattgaggttagtttttttcttgtgtgtgttgctttttccataaataatttttgttaagacttaacgttagtacgtttgatttaaagactgtagaggcagagaggatatctgttgatcatgttgcccatctcaaaccatctgatggtggctctgcggcgactcaatgtgagggttcttcttatcatcagtttatgtcttacagatattgagttgtactacccaatatattgtttttggaaaaatgatactgacagatatatttgagcagtggctgctcatctgacaggaatacacagtgccatcaagatgctcaatagcagggtccgtgttatccatcaatatcttgtttccatgcagaaaggtattttttgttgctgttgagccctcaaaatatgtctgctattcgatgtgcttgaaatatagttcaaaatatgtttgccacctgttacttcaaataggtatcaactgtaaatccctttaccatcactgcaggtgatatgccactggacaattcgctgcttaggcaagtctcaagcctagtaagaaggctaccagcaatggagtcagaaaaattccaagatgacttcctaatggtctgctaacttgataatattctctttatttttgtttatcaaccgttgtccttcatgcagtgatgatcttctctgaattttcaggaatacaatgacaccctcctcatgacttaccttgctatgttcactaactgttcaaggtatgcccccacttattatgcaaactacaaagccttttgatatgaaagaatgtcacaacatcaacaagataagattaaaaaaatactttatagggaactcaaatcagcttgtgatttgtacacttcaatgtattatcagcaaatttaatagattcactaatgttagtaaatccgtacttgcaaatgaagttatctgccaagagatgaagagaagttgaatcataatggttgtttactcgtttggcattgcacccatgtcagtgtattaatactcttgtaacttgcagcacaatgaatgagctggtcgagaagtttaacgcgacatacgagaggtcgactgccaggagaggaggccgaggtgctttcatgtagattttcccccttctgcatctgcagctggttctctgctgagattttggaaatagttacccatatggccaggaagtttttgcgtataatctgttaggaactatatctggcagccatcaagtttcttccaaactcatgctccctcgttcaggattgacacggcaaacatgttgatattcttgattctgtgcctagatcgttgtttattcctcattcgccaagattgacatgtaaagtttatccccatcacccccatggtagttacactatttgactccctaaatggatatggatgcaggtttcctgagttatgcttgtaaatttcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0500000, RefSeq:Os08g0500000