Difference between revisions of "Os08g0500800"

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(Created page with "{{JaponicaGene| GeneName = Os08g0500800| Description = PUG domain containing protein| Version = NM_001068695.1 GI:115477127 GeneID:4345952| Length = 4271 bp| Definition =...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0500800|
 
GeneName = Os08g0500800|

Revision as of 20:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0500800

Description

PUG domain containing protein

Version

NM_001068695.1 GI:115477127 GeneID:4345952

Length

4271 bp

Definition

Oryza sativa Japonica Group Os08g0500800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24814953..24819223

Sequence Coding Region

24815644..24815883,24815986..24816198,24816864..24816944,24817028..24817114,24817217..24817312
,24817426..24817479,24817573..24818622,24818715..24818754,24818855..24819003

Expression

GEO Profiles:Os08g0500800

Genome Context

<gbrowseImage1> name=NC_008401:24814953..24819223 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24814953..24819223 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagagaagagaatagctcggatttcggtcacttggagaggcagacagctcgatgtcgatgcagacccgagctgtacggtgaaggaattcgggcaacttttgcaggatttgactagtgttaacccagagacattgaagcttattgttccgcagtctacaaacaaaggctccaagctgatcacaccgttttccgaccctcattcagttttgacattgaaagaagctgctattagtgatgggaagcctattagaatgatgggtgtttttaatgatgaaatcgaggaagtatcggacaatggcaaaagaacagatctacggataattggatttgaggaggaagaacaacggctgaggcaacgaacatcaggcaggccccaagttccactcaaacttccacagggccaatacatcttctgtgattttcggacacttcacttacctgggattgagttgaatcccccaccttcagaagctctgaaaagaatgcacatgctagcatgtgacccaggcataattgcgatcatgaacaagcatagatggcgagtgggaatcatgactgaaatggcaccagtagggtatgtaggcgtcagtccaaaatgcattctaggcttcaataagaacatgggagaggaaatatcccttcgcctacgaactgatgacttgaaaggatttaggaaatatgaaagtatcaagagaactctactccatgaacttgcacacatggtgcactccgagcatgatgcaaatttttttgctcttaataagcagttgaatgatgaagcagcttccttggactggaccaagtcaagaggtcatgtgctgagtggtcgcaaaatcttcgattcctatgaagacgaatttgttctggagccagacagtgttgttgttggccacaaacttggaggaggatccagttcactggcaagtgctcgtgtgttgtctgggtctgctgcttataagcgttttttgaatgcatcagcggatttagagagttctaaagacagcgttactatacctggaaatgaaattcttgtgcctaacacaaaatttgagcctgatccagatgatgttggtcaagatttttctcaggacaacactaaggtggagccagacccagatgataatgatgacatgaacgtggatgtagggactggggcatcttggtcctcagtttctagatcatttacagaacaagataccatcagtcactcagagcctgaccctgatgatattcaccagcaaagcactgctggttgcctagaacctgaccctgatgattcctcaaatgttgatattcttagccaggagttgacgattgatgggaagcagaatggagaacctgatcctgacgataatggtactagcaaatttattcccgaacctgtaaacaagatggaagtagagactgaattgggaagtaacttcgcagttcagaattctgaacctgatcctgatgattcctcaaatgctattctgaataagaagctgggaactgacaggtctgatgaaactacatgcgaagctgttgtagaagaatgtgtaaacaagatggaagtggagactgaacagagcagaaactcgacaatgtcaaaatctgagcctgatcctgatgatcatgctgctaattcaaacatcagtgagctccagaggatcgaagaaccagtggcagccctctgtgcacgccttcagaaggccattgaaatgcttcgctcacaagcaacacctacagaggcaacttctgctcttcaaacactctttaagatcatcaagaatgtgatagagcacccacatgatatcaagtacaggagactgcgtaagtccaatccacagttccaaaggagtgtggcgaactacaaagctgcaatggaggtccttgaactgattggtttctgtgaggatgtcgtctcggatgagattggtcgtgcagagacttacttggtattgaaaaggaacgatcctggcttgctgtggcttgcaaaggcctctcttgaagtttccatggcctga</cdnaseq>

Protein Sequence

<aaseq>MEEKRIARISVTWRGRQLDVDADPSCTVKEFGQLLQDLTSVNPE TLKLIVPQSTNKGSKLITPFSDPHSVLTLKEAAISDGKPIRMMGVFNDEIEEVSDNGK RTDLRIIGFEEEEQRLRQRTSGRPQVPLKLPQGQYIFCDFRTLHLPGIELNPPPSEAL KRMHMLACDPGIIAIMNKHRWRVGIMTEMAPVGYVGVSPKCILGFNKNMGEEISLRLR TDDLKGFRKYESIKRTLLHELAHMVHSEHDANFFALNKQLNDEAASLDWTKSRGHVLS GRKIFDSYEDEFVLEPDSVVVGHKLGGGSSSLASARVLSGSAAYKRFLNASADLESSK DSVTIPGNEILVPNTKFEPDPDDVGQDFSQDNTKVEPDPDDNDDMNVDVGTGASWSSV SRSFTEQDTISHSEPDPDDIHQQSTAGCLEPDPDDSSNVDILSQELTIDGKQNGEPDP DDNGTSKFIPEPVNKMEVETELGSNFAVQNSEPDPDDSSNAILNKKLGTDRSDETTCE AVVEECVNKMEVETEQSRNSTMSKSEPDPDDHAANSNISELQRIEEPVAALCARLQKA IEMLRSQATPTEATSALQTLFKIIKNVIEHPHDIKYRRLRKSNPQFQRSVANYKAAME VLELIGFCEDVVSDEIGRAETYLVLKRNDPGLLWLAKASLEVSMA</aaseq>

Gene Sequence

<dnaseqindica>692..931#1034..1246#1912..1992#2076..2162#2265..2360#2474..2527#2621..3670#3763..3802#3903..4051#ccttccctccgagtgccgtacggccgctgccgccttctggaacattcgcttgcctccgccaaaaaaaaaaaaaaaaaatccctcctcccctctcccctcgagtggggcgcagccgcctcgctcgtcttccttcctcctccaccgccgcgcgtgcgcgagtgcgcagccgccatcgccgtgcgcttctctgcctcccgatctgcggtgcgaccggtgtgatcgcggagcggcggccgacgagaaggatttttttgagggaggggggcgagtggtgcgacgccgctgacctccttcaattccacctgccccaatctcggttgggaatcgaatcgaaaggtattcccatcccctcctgcttggctgagccatacggggctctgattgattcatatttgactcatattaagcatccagttttattctggatttttttttggcgcgtggtgtagtactactggagtagcaacttgtgtcccaaaataaaattgagggtttagccgccccctgctcattagatgcagtggccttatactttcatattgatatagcaagatagggtagtaattttttttcttccctgtcttgttgataacttcttggtaggtgccactatgatcttctgttataacatcatcatactatgaaattagtttgatggcataacgtgtttttttttcttatcaggaataagatggaagagaagagaatagctcggatttcggtcacttggagaggcagacagctcgatgtcgatgcagacccgagctgtacggtgaaggaattcgggcaacttttgcaggatttgactagtgttaacccagagacattgaagcttattgttccgcagtctacaaacaaaggctccaagctgatcacaccgttttccgaccctcattcagttttgacattgaaagaagctgctattagtgatgtaagatgcacaagagttgtacttgctcagcaatatgttgctacgttatggatattataatggagaatggaataatttatattcaatcattgtttgctacaggggaagcctattagaatgatgggtgtttttaatgatgaaatcgaggaagtatcggacaatggcaaaagaacagatctacggataattggatttgaggaggaagaacaacggctgaggcaacgaacatcaggcaggccccaagttccactcaaacttccacagggccaatacatcttctgtgattttcggacacttcacttacctgggattgaggttagttagcctctactccctacgtgctttctgaaatctataagaaacagttcatgtaggcatgtcaatccgccccttccatactccacatatcatttgtctcctcacggattatcataaaccttagcgcgcacattttcctctgaagtctgaactcttgcaatttcctgcttgaattaggatgcaagcagcgcacgaagtgttccatttgaacagtatgcacactataaattgtggattaaatagtttgaaggaattggaccattgtgcagtttgcactggtttctgtccaaaactttgtgaaaagacaacgttaaacaatgtggtgtgctcattttatttatcatagttaacaccttctcatttcatgacatgacttcactataataattataatgaaatcagtatatgtatgaaatgaatgggttcactatgacaattgtaatgaaatcagtatatgattcctgtaacttgctatagattatatatagtacattagatttgaacactagacattattttcatatatacctcattctttcgtaaaaaaaatacatgcatgctagtagaaaaacagatatacctgatttgtatgataacaaataggccaatcacaacatcttgaactatcgagttttgcttacgtgccttttgtttgatgccagttgaatcccccaccttcagaagctctgaaaagaatgcacatgctagcatgtgacccaggcataattgcgatcatgaacaaggtagcaatattttcaagtggtgtttctgttttttatgtttgtgtacattcgttattttacagttatcctgttggccttttcagcatagatggcgagtgggaatcatgactgaaatggcaccagtagggtatgtaggcgtcagtccaaaatgcattctaggcttcaataaggttagtataactgtataagctttttactactgcacatatggatacttgtcacacaacaatttctgaggttatatcatcatgtcttcctcattgttaatacagaacatgggagaggaaatatcccttcgcctacgaactgatgacttgaaaggatttaggaaatatgaaagtatcaagagaactctactccatgaacttgtatgcctccttggttttctgctttcatgaaatggagatttcttatgcagatcttccgtttgtcctctgtaatcatgcctattgtatattaaacttgcacttggtgatttcaggcacacatggtgcactccgagcatgatgcaaatttttttgctcttaataagcaggtgattttttttcctagacaatcctttcatgattggctactgtctctttatgtttttgagttaatctgttctttaatacaatgtcaatttcagttgaatgatgaagcagcttccttggactggaccaagtcaagaggtcatgtgctgagtggtcgcaaaatcttcgattcctatgaagacgaatttgttctggagccagacagtgttgttgttggccacaaacttggaggaggatccagttcactggcaagtgctcgtgtgttgtctgggtctgctgcttataagcgttttttgaatgcatcagcggatttagagagttctaaagacagcgttactatacctggaaatgaaattcttgtgcctaacacaaaatttgagcctgatccagatgatgttggtcaagatttttctcaggacaacactaaggtggagccagacccagatgataatgatgacatgaacgtggatgtagggactggggcatcttggtcctcagtttctagatcatttacagaacaagataccatcagtcactcagagcctgaccctgatgatattcaccagcaaagcactgctggttgcctagaacctgaccctgatgattcctcaaatgttgatattcttagccaggagttgacgattgatgggaagcagaatggagaacctgatcctgacgataatggtactagcaaatttattcccgaacctgtaaacaagatggaagtagagactgaattgggaagtaacttcgcagttcagaattctgaacctgatcctgatgattcctcaaatgctattctgaataagaagctgggaactgacaggtctgatgaaactacatgcgaagctgttgtagaagaatgtgtaaacaagatggaagtggagactgaacagagcagaaactcgacaatgtcaaaatctgagcctgatcctgatgatcatgctgctaattcaaacatcagtgagctccagaggatcgaagaaccagtggcagccctctgtgcacgccttcagaaggccattgaaatgcttcgctcacaagcaacacctacagaggcaacttctgctcttcaaacactctttaagatcatcaagaatgtgatagagcacccacatgatatcaagtacaggagactgcgtaaggtatgcttggctgttcttatgctcttttattaggttcaattggtccactaaaaaaattcttacttactaatcctcatttttcaaatatgcagtccaatccacagttccaaaggagtgtggcgaactacaaaggtatctatttgctttatagactcccctctttttttttcttcaggtcttcaaaaatcaactgtaactaacttcctcatttttttcgcctccctgaaaacagctgcaatggaggtccttgaactgattggtttctgtgaggatgtcgtctcggatgagattggtcgtgcagagacttacttggtattgaaaaggaacgatcctggcttgctgtggcttgcaaaggcctctcttgaagtttccatggcctgaattgtttcaccaagcaatctcctattgcttctgtatacctgtaaatcattttcattactgttgtggggatgctcatatgctgctcttaggcaaatgatgtagtatggtcttcctacacgatgattgtttgtatatggaaacaccaaaatggtctatactgtctgtcaacacacttcatgatttctcatcaaatatacaaactatagataaattacctggc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0500800, RefSeq:Os08g0500800