Difference between revisions of "Os08g0515700"

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(Created page with "{{JaponicaGene| GeneName = Os08g0515700| Description = Protein of unknown function DUF547 domain containing protein| Version = NM_001068769.1 GI:115477275 GeneID:4346031| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0515700|
 
GeneName = Os08g0515700|

Revision as of 20:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0515700

Description

Protein of unknown function DUF547 domain containing protein

Version

NM_001068769.1 GI:115477275 GeneID:4346031

Length

4011 bp

Definition

Oryza sativa Japonica Group Os08g0515700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25672995..25677005

Sequence Coding Region

25673446..25673552,25674119..25674179,25674331..25674444,25674744..25674875,25674973..25675101
,25675271..25675668,25675750..25675849,25675981..25676040,25676128..25676214
,25676305..25676433,25676507..25676806

Expression

GEO Profiles:Os08g0515700

Genome Context

<gbrowseImage1> name=NC_008401:25672995..25677005 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25672995..25677005 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagacgcagcatcagaggtgttcatggaaacaaccatttgttgtgcagaaacaccaagagctagccattcatcttcttatctgcagcaatgtcactcgagaagcgttgtaagcacacatggaaatgtattggacatatcgcctcgactctcttatcacaaacctacaaccaacaaagataagatgctccgcagaagatattctcttaacctgccagagcatttgcctgagcatcacgtgattacaagtgcagaacaaagtgagaaaaccatatcaaagtctattgcagacttagtttgggagatagcagcccttgaggaggaagttgttcgcaaggaactgcatttgctttccctctacagggcagcatttgatcaacacctaggtgtatcccctcgtgtttctacccaggtggatcaagaaatacaccatcagaaaagcagaaagaaagctgatgaaggtgccctccgattgagaaatatcaaggagtcagcatcctacaacttgccaacagtatcaacagtttcagattctaaacatgggctgtcgagatcatcttcaggacattctagccttgcaaatttcttgagtgcttcaatcgctgaatatgtgccaaagatctcttgcaaactttcggaggacatcgtaagatgcatttctgcagtatactgcaaacttgcaagccagccatcacaaaatttggcggattttgagactttatcaactccttcattctcctcttcatcaagtacattttctttaaagcaccgtgttgatagttggagtccccgatgccattacaatgtcaacacaagctctgacaaatatgattcattgaatgagaaaagtgaacaatacaatgggatgataatatgcccaaggatatatatggatgcagaaaagtttgaatatgcctctaaaatgctagagactgtcagatcgctgataaaacgacttgagaaaattgacccaacaaaaatggcacatgaagagcagctctgtttttggatcaacatccacaacgctttggtgatgcatgcttttatggcttatggacttcaggagaaacgcatgaaaaacacagacatgattctgaaggctgcatataatgtgggtgggctttcagtaaacgcccaaattatccagaactcaattattggatgccaatcccatcgcacttcagtgtgggtacggactctatttactccactgaaaaaatcggcatcagggagctccatacatccatatgctcttcatcctccagagccacttgctcattttgctctttccactggagcaatttcagatccacctgtgaggctgtacactgccaagaaagtgaatcatcaactggatcaagccaggactgagttcattcaagctagtgtcatagtcagaaagcagacaatcttcctacctaaagttctccatcattatgcgaaggatgctgctctcgagttgcctgacttggttgagatggcatgtgagatcatgcctgaagctcaacaaaaggaaatcagacaatgtcttcggagaagaatagacaagtgtgttgagtggatccccttcaaatcatctttcagatatactatacataggagtttggctgagtag</cdnaseq>

Protein Sequence

<aaseq>MEDAASEVFMETTICCAETPRASHSSSYLQQCHSRSVVSTHGNV LDISPRLSYHKPTTNKDKMLRRRYSLNLPEHLPEHHVITSAEQSEKTISKSIADLVWE IAALEEEVVRKELHLLSLYRAAFDQHLGVSPRVSTQVDQEIHHQKSRKKADEGALRLR NIKESASYNLPTVSTVSDSKHGLSRSSSGHSSLANFLSASIAEYVPKISCKLSEDIVR CISAVYCKLASQPSQNLADFETLSTPSFSSSSSTFSLKHRVDSWSPRCHYNVNTSSDK YDSLNEKSEQYNGMIICPRIYMDAEKFEYASKMLETVRSLIKRLEKIDPTKMAHEEQL CFWINIHNALVMHAFMAYGLQEKRMKNTDMILKAAYNVGGLSVNAQIIQNSIIGCQSH RTSVWVRTLFTPLKKSASGSSIHPYALHPPEPLAHFALSTGAISDPPVRLYTAKKVNH QLDQARTEFIQASVIVRKQTIFLPKVLHHYAKDAALELPDLVEMACEIMPEAQQKEIR QCLRRRIDKCVEWIPFKSSFRYTIHRSLAE</aaseq>

Gene Sequence

<dnaseqindica>452..558#1125..1185#1337..1450#1750..1881#1979..2107#2277..2674#2756..2855#2987..3046#3134..3220#3311..3439#3513..3812#atcagcttcctggccattattatctatcagcataggttggagaagtagtactggcaaccaggagtccaggacatctcctgcccatcatttctgctgttcttcattattcttgtctctactctagtaccaaggagaatttgcatttccttctgttcttcagaccctttgctgagttctgtagaagctgggggattggagttgggagagagagtgaagatttctcatcatccagaccaagctgaatcatggccttcttcttctgttctgctcattgctagctacactgcatagcaacagctcatgatatatcagcctggtaagttcattagtttcggtaattggattattcttctccttctcttcagctagttatggagaactgaataggattgcaatactttcttgctcttgattggtggtaggttcttggtgactgaaggtctaggaatccatggaagacgcagcatcagaggtgttcatggaaacaaccatttgttgtgcagaaacaccaagagctagccattcatcttcttatctgcagcaatgtcactcgagaaggttagcaagcatacacaatcttttcagcaggctgctgataaattttgttcttctaggctcttacaatttttgcagaaagcatttgcgagataatagcagctagaagaaagcagaatcgattaatgtatagataagcagggcaactctaatcgtttttatcaatgtccaatatattgttcatcaccatttggttgcatcataattcagaggcagcagcattttgctgcatcaagcctcccttttttttctgtgttgcggtgctgtgtcattttctacaccaactcacttgacaaactgtcaggtgagaccgtgagacatgttactgtaaatgatgttgaaagttgctcttctagaaacagcaaaatccccctttattgtgagcgtgaagaagaatagcaacgtacacagttgtacaagcaaatcatccagcacactatctgttcctattgtctgctatctttgactacaaaacatctgattcactattctcagctgcttagctttcagtttgtttgaatgattattctgattaagcagcgttcttactttagttcttgtattttcagcgttgtaagcacacatggaaatgtattggacatatcgcctcgactctcttatcacaaacctgtgggtaatttaaattccctattttgttagttattttgttaataacttttccccggtgtcttgtttcaaataagcaaaagttactacaaacttaaattactactttcttactgaattttgctttaatgatattattttcatgattgtgcagacaaccaacaaagataagatgctccgcagaagatattctcttaacctgccagagcatttgcctgagcatcacgtgattacaagtgcagaacaaagtgagaaaaccatatcaaaggtttgctccacatcctcataagttgcatagtatttcatgatctcaaggtcctatttgtttccaaaagctgaagaaaagctgttcagttcaggttttatacccgtacttttgttctaatcatcttgctttttttcaaaataacttgaggccttaagaatagtaacaaagatcatgtgccataataatgatactctgaaaacagtgttccaactttaaaattcaaaacgaagtgaaaaggcaaatgaaattataaacatttagttatcgatatctgatcactgaccttgtggttcctgcagtctattgcagacttagtttgggagatagcagcccttgaggaggaagttgttcgcaaggaactgcatttgctttccctctacagggcagcatttgatcaacacctaggtgtatcccctcgtgtttctacccaggtacatgccttgcaccttggatggatcaattttcagaactatactgcacataaattcagagagtatacagtatatttaggtttacaatcatgatcaggtggatcaagaaatacaccatcagaaaagcagaaagaaagctgatgaaggtgccctccgattgagaaatatcaaggagtcagcatcctacaacttgccaacagtatcaacagtttcagattctaaacatgtatgaacaatctcttcttttagttcttctgataaaacttaccagtttgtgccagtttcagttatatctttttcctcttcaaagtacaggttttagctcaggcacaaacatatggttttctgtcaaaatctctcaaactgagaaaatctatctttcatgtttttcacaggggctgtcgagatcatcttcaggacattctagccttgcaaatttcttgagtgcttcaatcgctgaatatgtgccaaagatctcttgcaaactttcggaggacatcgtaagatgcatttctgcagtatactgcaaacttgcaagccagccatcacaaaatttggcggattttgagactttatcaactccttcattctcctcttcatcaagtacattttctttaaagcaccgtgttgatagttggagtccccgatgccattacaatgtcaacacaagctctgacaaatatgattcattgaatgagaaaagtgaacaatacaatgggatgataatatgcccaaggatatatatggatgcagaaaagtttgaatatgcctctaaaatgctagagactgtcaggtaagcaactctgcaataaagaaatcctataaagcaggaaatgctatttatttacttatgttcacttttttttaatctcagatcgctgataaaacgacttgagaaaattgacccaacaaaaatggcacatgaagagcagctctgtttttggatcaacatccacaacgctttggtgatgcatgtatgcatagtagtcataacattttttttttatgactgacaacagttgtcaccttcgctatgttctacacttcagtgttaaacccagaatgcatgcacacctaacccgcagtattttctgaaatataacaggcttttatggcttatggacttcaggagaaacgcatgaaaaacacagacatgattctgaaggtacacaactatcaaatttgaacaatgatactgtcatcatttgaaatgttttgatatatcttacatacttgaacaatctgttgtcaggctgcatataatgtgggtgggctttcagtaaacgcccaaattatccagaactcaattattggatgccaatcccatcgcacttcagtggtatggtttacacctgcacaatattttccaccaataatacaaagacaaacacatttgaggaaagaaactaacaaaataattgacatgcagtgggtacggactctatttactccactgaaaaaatcggcatcagggagctccatacatccatatgctcttcatcctccagagccacttgctcattttgctctttccactggagcaatttcagatccacctgtaagcagaatagatatgctaaaattttgtctgcaaagtgatcacaatattcttactgtaaaaagttctgcaggtgaggctgtacactgccaagaaagtgaatcatcaactggatcaagccaggactgagttcattcaagctagtgtcatagtcagaaagcagacaatcttcctacctaaagttctccatcattatgcgaaggatgctgctctcgagttgcctgacttggttgagatggcatgtgagatcatgcctgaagctcaacaaaaggaaatcagacaatgtcttcggagaagaatagacaagtgtgttgagtggatccccttcaaatcatctttcagatatactatacataggagtttggctgagtaggcactgttttcccactttccccaattgtgcttgtaagtaatgaacaaataacaaatgattggtgtatatgtgtagtgtaaataggtgattgtgatagcttccaaggataggaatgctgtagtaatgtcttccccttactgctgtagtggtacaactcacttgggcatttcaactgagaagagcatgccgacaagaaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0515700, RefSeq:Os08g0515700