Difference between revisions of "Os08g0517700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0517700| Description = Oxysterol-binding protein family protein| Version = NM_001068780.1 GI:115477297 GeneID:4346042| Length = 4408 bp| D...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0517700|
 
GeneName = Os08g0517700|

Revision as of 20:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0517700

Description

Oxysterol-binding protein family protein

Version

NM_001068780.1 GI:115477297 GeneID:4346042

Length

4408 bp

Definition

Oryza sativa Japonica Group Os08g0517700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25783179..25787586

Sequence Coding Region

25783293..25783295,25784746..25784913,25785889..25786134,25786279..25786375,25786480..25786877
,25787260..25787514

Expression

GEO Profiles:Os08g0517700

Genome Context

<gbrowseImage1> name=NC_008401:25783179..25787586 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25783179..25787586 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttgagtcggggagcgaggcggcggcggcgacggcggcggcggtgctgacggcgccgctgtccctggagggcggcctcgcggcggagctccggccggcgaacctcgtgcagcgcgtgctcagcctcttccgcaacgtccgacccggctccgatctctctcactttcagctgcctgctacgttcaacctgccgaagtcgcagctccagttatacggcgagggagtgtactgcgtcggaaaagactacctgcggcggtgcgcgaaggggagcgacgccgtcgagcggttcgcggcggtcgtcggctggagcatctcgacgacgaggcctcccatcttcggcttcgcgccgtacaaccccgttcttggagagacccaccatgtctccagcggatcactccatgttcttctcgagcaggtgtctcatcgtcctccggtctctgcactgcatgccactgacgatgacggtgagatcgagctcgtctggtgccaaaacccaatcccgaaattccacggcacaagcgtggaagcgacagtgaaaggcatgaggcacgtcaagcttctgaaattcagcgagaattacgagatcgactgcccaaacctgctcatcaggttgctgcctgctccatcagcggagtggtctgggacagtcaggatcgtctgcaaggagtccgagctcgaagcagagttgatctactacaggagcaacgctttcctgggactaggtggcgatccaagatgtgttaagggtaagatattcagctcaagatcaggagagatcatctgcgagattgatggacattgggatcggatcgtgtcggcgaaggatgcgaagaccgggaaggtgtcggttctgtacgatgctgaatccgccattgctgacctcaagacacctgtggtcagaaaccaagagggcgtgtcaccttcagaatctgtggtggtttggggcgaggtgagcgatgccatcctgaagaaagactgggagagatctagtcaggcgaagcgacgagtggaggacacggcgaggaggctagacagagagaggaacgacaagggagaggtctggattcccaagcatttctcgctgtctcaggacaagaacggcagctgggaatgctcgccgctggagaaatctgtgcctccagctccgatcattgtcccctcatga</cdnaseq>

Protein Sequence

<aaseq>MVESGSEAAAATAAAVLTAPLSLEGGLAAELRPANLVQRVLSLF RNVRPGSDLSHFQLPATFNLPKSQLQLYGEGVYCVGKDYLRRCAKGSDAVERFAAVVG WSISTTRPPIFGFAPYNPVLGETHHVSSGSLHVLLEQVSHRPPVSALHATDDDGEIEL VWCQNPIPKFHGTSVEATVKGMRHVKLLKFSENYEIDCPNLLIRLLPAPSAEWSGTVR IVCKESELEAELIYYRSNAFLGLGGDPRCVKGKIFSSRSGEIICEIDGHWDRIVSAKD AKTGKVSVLYDAESAIADLKTPVVRNQEGVSPSESVVVWGEVSDAILKKDWERSSQAK RRVEDTARRLDRERNDKGEVWIPKHFSLSQDKNGSWECSPLEKSVPPAPIIVPS</aaseq>

Gene Sequence

<dnaseqindica>115..117#1568..1735#2711..2956#3101..3197#3302..3699#4082..4336#agctcccgcgcgcgctgttccggccgccgccgagctggtcggagtcggaggcgaccgccgatagccctgccggcgagagatcgatcgatcggcgtcgccgatccgacatatccaatggtacgtgtgttcatccaaatgcgcatatatatatatatatatatatgctctatctatctttcggcgatgaattcgccgccgtccggccacgcgccgccgtggtcgcgcggcggcggccttcgatgagattccgatcgatggttctttcgacgacggcgacgccgatcgacatgcatatgcctgccacgccacttggcactagctagctccatctatcgattctttcttttctttctccctgctttttgcaatttgcatgccctctctcttccgtctccctttccgttctcgcttttggccttcgttactttcaaatctcttgacatgcaaatgcattgaaaaaaaacatattctcaaacttcataactcatcaggtccatatgtcagcgacccacgttaaaaaattgcattcgaatcgaccgacctctcttactgcaagctctccatttttctcaccgtcaaccacacaagatagcacatgacggctacagatcgaaagcttacacgaatatatccattctgaaagaagaagaagaaaaaagaggcatcggttaatttgcttttcgttgcagaaaagaaaccaggcgtacgcaactacgcatacatacatgtcggcctcgatccacactccaaaacggaatatatttctttttcccctccttgtttttcttggcccgattggccggccattgcatcgctgacctcttctccacccttgttgataatttgatttataatcgagtcgtcgttctcgccaattggccggcgacaccttcagctacctcttagattcctttcctctcatcgttttctaaaatcacacgtctacatatatagtaccgaaagaaaaaaaacaattaaaaagttcagataaacatattctgtcacctactgctaataataatgggaatattatactacgtcgtgttgtacagaaaaattcgatcttggtcagttggtcagacgtttcgcgtccttttctcccctcccactacctcccgttcgttgtaatttagctcatttcttcgcgttgccgatttggaaattggaagtttcacacgcagcatcgcttgttcttgttcttaattggttatctgactgcgacactacgtacaataataattaaggtagtagtagcagcatatttttttttcacttgtgtgatttaattcgtctccttgcatttttctggttctctgttgctgttgttctcttgtgccagcctttcgttttcctctgtttgcttcgatcgatctgaaactctcccatagttttactcgtctctgtctgacaaaattactactgtagattaattactcttttgtattaatatcatattttgcatcgaagcatgcaactggggttgcttggtcattttctgagcccgtgactgacgacgagacgaacaaaaacctcaccgtccagctctcgccaatcgatgctgatgcaggttgagtcggggagcgaggcggcggcggcgacggcggcggcggtgctgacggcgccgctgtccctggagggcggcctcgcggcggagctccggccggcgaacctcgtgcagcgcgtgctcagcctcttccgcaacgtccgacccggctccgatctctctcactttcaggtaccaaatcatcaaactgaaactgatccccagctcagctgctagccattcttgatcctagctaggcatagcattgtgtgattaattgtgtgcatgcatttgaaactccaatctcgagagtgtttaaatttggatttactactagttaatctaatcacttcaggtcaggagcattatatcaccctgaaatcagcaatgattttggggagggagtgactagctagtggagtagtgtactctactccactaattaatcatgaggattagtttttgcttgtgggatatgaggagtagtagtaggtgttgagtaaaccaagagaacaagcttcaatacttttaagagaaaacaaaacaagcttcaatagttgaacaacacttccttgctcacttttataaggagtattttgatttcgagaaagtcaaatgaactttgaatattttggctaacgacggttagtaataatacaactatatttggtgcataaaagttgtgcctatatatttgtatttcaaatcaggagctttcacataatactgctctactaattaatcatgtggattagtctttgtttgtgggaaatgaggagtagtaggtgttgagcgaacaaaaaaacaagctgacttttcaaaaaataaaatcaacacaagcttcaagagttgaatagtattgctacttgcgtagttgcatatgtaagcatgatgaacggcatagtccatgggggcacgcctgtttttcaacaaaaggaactcaaatttcggatgtggattcgtgattgcttagtttgacagctttcggtttctcagtaggggataaatgttaactaatgtggtcaacactttcagtttcctggcacctagcctaatcaattactatcatctaatcagtcactgtctagcagtaatttcgcagtcaaaatgacgttaatttgactgaattttttcatctgaatttgtctgaatttttgtcatcatcagctgcctgctacgttcaacctgccgaagtcgcagctccagttatacggcgagggagtgtactgcgtcggaaaagactacctgcggcggtgcgcgaaggggagcgacgccgtcgagcggttcgcggcggtcgtcggctggagcatctcgacgacgaggcctcccatcttcggcttcgcgccgtacaaccccgttcttggagagacccaccatgtctccagcggatcactccatgttcttctcgagcaggtgattcatcacaatgtcatgcgttaaatttgtagtttcgcgataaatttggtgttaaaatatgtagccatgtatctgtagttttgtgaaatttacagatgatttgtttctgaatctctgacagaaaattgtggtctttttcaggtgtctcatcgtcctccggtctctgcactgcatgccactgacgatgacggtgagatcgagctcgtctggtgccaaaacccaatcccgaaattccacggtacgtaggccagattcagaatgaaattctactccatttcctgcccatcaatttccaagtttcagagtctgaaattctactccatttcctgctcatttctgaaggcacaagcgtggaagcgacagtgaaaggcatgaggcacgtcaagcttctgaaattcagcgagaattacgagatcgactgcccaaacctgctcatcaggttgctgcctgctccatcagcggagtggtctgggacagtcaggatcgtctgcaaggagtccgagctcgaagcagagttgatctactacaggagcaacgctttcctgggactaggtggcgatccaagatgtgttaagggtaagatattcagctcaagatcaggagagatcatctgcgagattgatggacattgggatcggatcgtgtcggcgaaggatgcgaagaccgggaaggtgtcggttctgtacgatgctgaatccgccattgctgacctcaagacacctgtggtcagaaaccaagaggtaacttctttctgacaatttgtgctcacaagaaatctgaactttgtgcattttttcatgctgcaagttcagatggcagtatcccagagataaaattcagactaagtccacatatgattcaattcaacaactgcaacgtacaaactaagcaggaaaaaagaaaaaaatatcactgaattaggaaccaaagatgtactaacttatgaaaacctcactgaccattgttaccctaccaattatgttcacaagaactctgaactttggccatgtagataaaattcagtctaactgatttcattttcagtcgttcaacaaaactttaacctacaaactaagcagaaaatcagtgaccaatactgaatttgtcatgattgtgtttcagggcgtgtcaccttcagaatctgtggtggtttggggcgaggtgagcgatgccatcctgaagaaagactgggagagatctagtcaggcgaagcgacgagtggaggacacggcgaggaggctagacagagagaggaacgacaagggagaggtctggattcccaagcatttctcgctgtctcaggacaagaacggcagctgggaatgctcgccgctggagaaatctgtgcctccagctccgatcattgtcccctcatgactgtagattacatgtaacagatgatcctatatatactatataaatctataacatagctgatgatttgatttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0517700, RefSeq:Os08g0517700