Difference between revisions of "Os08g0519800"
(Created page with "{{JaponicaGene|
GeneName = Os08g0519800|
Description = Similar to Maternal pumilio protein. Splice isoform E|
Version = NM_001068797.1 GI:115477331 GeneID:4346059|
Length ...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0519800| | GeneName = Os08g0519800| | ||
Revision as of 20:52, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0519800 |
|---|---|
| Description |
Similar to Maternal pumilio protein. Splice isoform E |
| Version |
NM_001068797.1 GI:115477331 GeneID:4346059 |
| Length |
7771 bp |
| Definition |
Oryza sativa Japonica Group Os08g0519800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:25924771..25932541 |
| Sequence Coding Region |
25925800..25926438,25927857..25929259,25929357..25929498,25929662..25929769,25930593..25930805 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:25924771..25932541 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:25924771..25932541 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggctacagagagcgctgtccggttaattggaggaacggggtctggtaactggagcaaggacttcggtgcatttgactcatcactgggtagtctttcaggagaaggtctggggtttgtggacaataacagtggcgtttatgggggctggagggagtctgtcccaaatcgcagtggaagtgcgccgcctagcatggaagggtctcttgctgctcttggtcatatgataggtcagcagagtgggaacttggaagccactttaggggggaagctgggaaacgtagcggacagttccaaatctgaggagcagctacgtgctgatccggcatactgtgactattatggctccaaggtcaatttgaacccaaggcttccgccaccacttatgtctagggagagcagacgcttcatgaaccgggttggcaaagttaaagaatggagagtggtttctcaagatgacagcaacaaaggttccttgtttattcctcgatctactctgtcaacacacagagaagagcctgaggacgataggtcaccaaggttggattcaagttcagcagaggatgcccaaggttctggtaaaagtggatccaactttgatagccattatacttgtatgaatcttggagattttgcatcgaaagccgcttctttgtatgacagttctactcatccatcaaatagcaatactggtgatggtatatctgaccattctgacattaactcatcaacgaatttttcaattgatgctgtcaagacatctgggttgaattcatggacacctgttcctgtgactaacacagtgagaagtacacatagcaacagtatttcatctacatctgttcccagttcatcaagtcctgataacaaccccagtatgcaaacttctcagcaagagaagcctagcatagacatcaagcatgggaatgatgtgcctggcagcggttctattctgactgaactagatactgtgaactccaatatgaagaatctgaggataagtttggatagccatgataccatacatgttaagcagcagtggccggacaatgtcttgcagcagtttggcccctcacctttagtccagggtgatcctattcaaatgattcctcaaggaacacatcttccccatgttccttttgttgagaacttgtcgcatactcaattaaaattaccaactggtgacatgcagcaatttttaccaccgcctggtatgacaacacctttttatgcaccaaattcttttggaagcccttactatcaaaatttgcatccggctagtgtattgccaacaccatttggaactgctggatatgctttgagtggttcagctttaccacctgttatgactagctatgctccccaggtttctgttgctacacctgttgacagccctattactccaagctttagtggtagaccatctggttttccttcaccagggaatcttagtgcaggagcagaatttgttcagccatataaaatgtatggacaacaacttggggttaccatgcagccatccgttcctgacccaaacttctttcagttctttcagcatccttctttactttcatatgctggtataaatcaatacaatacaatgggaccaagggttagtgttgttgggaatcctgctgatagttttgatccccaaaaggtattatcccagcctgcgtatccatctgatcagaggcttcaacttccaagaactggaatttataactctcctgcagccagaagaggaggggccgctccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagcccagtgtttcagggacagactttcactggagtattttctcctggtaggagaaatgattctgtgagattccaaactccctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcgatgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttgaactatctgatattgcaggccatatagtagaatacagcgctgaccaacatggcagccgattcatccaacagaagttagagaactgcactgctgaagagaaggcatctgtgttttcagaagttctccctcatgcttcatcattaatgactgatgtgtttgggaattatgtgatccaaaagttcttcgaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcatgttttacctttgagccttcaaatgtatggatgccgagtaattcaaaaggctcttgaagttatggaacttgaccaaaaaatagaactagttcgtgagcttgatggaaacattatgcgatgtgtccgtgatcaaaatgggaaccatgttatacagaagtgcattgaatgtgttcctacagaacatattggctttgtagtatctgcttttcgggggcaggtggccagcctttcaatgcacccatatggttgccgtgttattcagagagttttggagcactgcggtggtgattcacaaggccagtgcataatagatgagatactggagtcggcttgcgtcctcgcacaagatcagtatggcaactatgttacacagcatgttttggaaagaggaaggggacatgaaaggacccaaattatcagtaaattggctgggcaggttgttaccatgagtcaaaacaaattcgcatcaaatgtgatagagaagtgctttcaacatggggatatgacagagcgagatcttctgatccgggagattgtgaagcagactgagggcaatgataacttgctggcgatgatgaaggaccagtatgcaaactatgtagttcagaagatacttgaaacatgcaacgagcaacagagagagctcctgctcagccgtgtgaagggccatctgcaagcattaaggaagtacacctatggcaagcatattgtgagccgagttgagcaactttgtggtgaaggagacaccgagtcagattcttga</cdnaseq> |
| Protein Sequence |
<aaseq>MATESAVRLIGGTGSGNWSKDFGAFDSSLGSLSGEGLGFVDNNS GVYGGWRESVPNRSGSAPPSMEGSLAALGHMIGQQSGNLEATLGGKLGNVADSSKSEE QLRADPAYCDYYGSKVNLNPRLPPPLMSRESRRFMNRVGKVKEWRVVSQDDSNKGSLF IPRSTLSTHREEPEDDRSPRLDSSSAEDAQGSGKSGSNFDSHYTCMNLGDFASKAASL YDSSTHPSNSNTGDGISDHSDINSSTNFSIDAVKTSGLNSWTPVPVTNTVRSTHSNSI SSTSVPSSSSPDNNPSMQTSQQEKPSIDIKHGNDVPGSGSILTELDTVNSNMKNLRIS LDSHDTIHVKQQWPDNVLQQFGPSPLVQGDPIQMIPQGTHLPHVPFVENLSHTQLKLP TGDMQQFLPPPGMTTPFYAPNSFGSPYYQNLHPASVLPTPFGTAGYALSGSALPPVMT SYAPQVSVATPVDSPITPSFSGRPSGFPSPGNLSAGAEFVQPYKMYGQQLGVTMQPSV PDPNFFQFFQHPSLLSYAGINQYNTMGPRVSVVGNPADSFDPQKVLSQPAYPSDQRLQ LPRTGIYNSPAARRGGAAPNYQGMTPYVGAPMTYPTSPVFQGQTFTGVFSPGRRNDSV RFQTPSRNMTAYSGVQGQREREKFDDPKACSFLEELKSNRARRVELSDIAGHIVEYSA DQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRD LATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVI QKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILE SACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHG DMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQRELLLSRVKGHL QALRKYTYGKHIVSRVEQLCGEGDTESDS</aaseq> |
| Gene Sequence |
<dnaseqindica>1030..1668#3087..4489#4587..4728#4892..4999#5823..6035#6120..6230#6576..6770#7032..7203#7312..7334#actgcacgccaccacaccaccgcagctcacctctcaagtctcaagtctcaagtcgactcgactcgagcggcgccgccacccctcgcctctgctcttctcctcttctcttttcctcctctttcgcttttgcttctccaaacccttgcctctctctctctctctctctctctttctctctctctctctctcctcctcctcctccgccggagaccacgggcctcaccctgctgctccgagctccccctccggcggcggcgaacatccacggtctggctctaggctgctgctcctcctggggtggggtggggtgtggcctcgtcggccggcgagcaggttcggaggagatagccaggaggcggccgggtggaatcgggctgaaggtatttgttcctctctccaagccctagcccttctcctccgcgccacctcgtgagccggcgcggtgtagattggagatataatggataaaaattccttcttggattgatttttattactgctccgtttaccccatccggtttcgtcccaatcccctttctgaggagcaacgacttcggtgcaagtttccttttttttttcttcctttcttttttttttttgggttggctaggggttcagcttaaccccctcattccacacgttacgttcgcctgtggctggtggactgcaacatgtagcctattagtattatgtataaccttttattgtgctactaaaaatcttcatttttacgattagccagttccaccaaatcacaagttttccttactgcctcatttgtatccttttgggaggtcctgaggttgtgtagcttaatgtttttatttatccacagttgtttctttaccctattcaagaagtataattgggaacttgtttgcttgcaccaatctaatattgttacctaatgcattatcgaacctagtaaattctgaatagccagacttggaaagtagcaaagtggggaatggaaattgcaaatgtattcgatggatgaacactgaatattcagtttctctttgcagtgtgatggctacagagagcgctgtccggttaattggaggaacggggtctggtaactggagcaaggacttcggtgcatttgactcatcactgggtagtctttcaggagaaggtctggggtttgtggacaataacagtggcgtttatgggggctggagggagtctgtcccaaatcgcagtggaagtgcgccgcctagcatggaagggtctcttgctgctcttggtcatatgataggtcagcagagtgggaacttggaagccactttaggggggaagctgggaaacgtagcggacagttccaaatctgaggagcagctacgtgctgatccggcatactgtgactattatggctccaaggtcaatttgaacccaaggcttccgccaccacttatgtctagggagagcagacgcttcatgaaccgggttggcaaagttaaagaatggagagtggtttctcaagatgacagcaacaaaggttccttgtttattcctcgatctactctgtcaacacacagagaagagcctgaggacgataggtcaccaaggttggattcaagttcagcagaggatgcccaaggttctggtaaaagtggatccaactttgatagccattatacttgtatgaatcttggagattttgcatcggtgagtgctcctcatgatccaaacctctcctgctcccctgatgtctcacataaaaatatttatgtattttatcgtcctatgttttgatttcacaaagtatcttccaaaattgctaatgaaccactaccaatgtcacccagtctttcaacttgagttcgaggatgatatgacactattttggtgagaaaatattaaggtttcccattttatggggaactgatcactctaatcttagtgcatatctatatactactttgaatattggtagtggccaatgttcactatatgaatcaaatacaatatggataatttatatcaattgttcctcgctacgagcaactgtgtagctcacatacatgtacaaaattgtaccaagtatgatatgatgattagagtgggaatacttttattttgccttttgggctttattgtaaatcctattgcaacacaggggtatttagctagtatttgagaacaagagaaaggcgatgtgacagtcaaactatcagtagtaaagtacaatatccaaattgccaaatcacttacatctatataattatcgtaaatctacagttaattgcctcaatcttctagttcaaaaatgatcatgaatttctctgctattattgtacataccatacaaaaagtgttgaagatgtttgcagtgttctatttctaagctgccatacagtgttttatatctgccacatgttgcatgggtttggagtgtccaaaccagttagtgttaagttgttaactcacagcaaattttgcagcaggcagcaaataattatgacattttcatcagctattttgcttttctgaaagtcactagcctaaccagccctacttaaaccttggaatttcctttgctattttgctatagttcaagagcttgtcaagattccttataactgatcaaagttcaatttggcattccttctttgcggagtggagttctgtagtgtctttagttatttaccatctatagtataataactctgttatgtgttacaggatgctaccaattgtgctaatctgtattagaacatcgttggtggttgaatatttcatgtcatggacaactctacttttctgttatatctctaaggtcataatgtttaattagttaatctatgaaactgtaaaataaataaaaggaggtattttattaaaatccatagtcattctcatatgcaccctaccaaagtcactagtgtacaatggcatgataaattgttgagcttgggatttgaccaaatcgtatttggttgtttcttttgataatgaattattgatttctttcctgtcttcacttgcaaatgaagtttgaagtattgctttgatttattttcatgcatattatagttgatattctcatcatctgttttatatctttttaggagagttttcagcagaaagccgcttctttgtatgacagttctactcatccatcaaatagcaatactggtgatggtatatctgaccattctgacattaactcatcaacgaatttttcaattgatgctgtcaagacatctgggttgaattcatggacacctgttcctgtgactaacacagtgagaagtacacatagcaacagtatttcatctacatctgttcccagttcatcaagtcctgataacaaccccagtatgcaaacttctcagcaagagaagcctagcatagacatcaagcatgggaatgatgtgcctggcagcggttctattctgactgaactagatactgtgaactccaatatgaagaatctgaggataagtttggatagccatgataccatacatgttaagcagcagtggccggacaatgtcttgcagcagtttggcccctcacctttagtccagggtgatcctattcaaatgattcctcaaggaacacatcttccccatgttccttttgttgagaacttgtcgcatactcaattaaaattaccaactggtgacatgcagcaatttttaccaccgcctggtatgacaacacctttttatgcaccaaattcttttggaagcccttactatcaaaatttgcatccggctagtgtattgccaacaccatttggaactgctggatatgctttgagtggttcagctttaccacctgttatgactagctatgctccccaggtttctgttgctacacctgttgacagccctattactccaagctttagtggtagaccatctggttttccttcaccagggaatcttagtgcaggagcagaatttgttcagccatataaaatgtatggacaacaacttggggttaccatgcagccatccgttcctgacccaaacttctttcagttctttcagcatccttctttactttcatatgctggtataaatcaatacaatacaatgggaccaagggttagtgttgttgggaatcctgctgatagttttgatccccaaaaggtattatcccagcctgcgtatccatctgatcagaggcttcaacttccaagaactggaatttataactctcctgcagccagaagaggaggggccgctccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagcccagtgtttcagggacagactttcactggagtattttctcctggtaggagaaatgattctgtgagattccaaactccctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcgatgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttgaactatctgatattgcaggccatatagtagaatacaggttagtctcgaggtgttccttttagttgttctgtcttagacatgtctactcatatacaacttttggtcattaattcctgatgtattttttacctcagcgctgaccaacatggcagccgattcatccaacagaagttagagaactgcactgctgaagagaaggcatctgtgttttcagaagttctccctcatgcttcatcattaatgactgatgtgtttgggaattatgtgatccaaaaggtatgctgctgtaagagttaatatgtcaatgcctattgtctgtggtaaaaatcatgtgttgcatgttgtggtctagtcacttcatcttacataactatgctttgtgaccaataacaactctgagttttatcatatctgaagaaatgacatataatatctgcagttcttcgaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcatgttttacctttgagccttcaaatgtatggatgccgagtaattcaaaaggtaatctttacctttttcttattttatctttcctaaaatcaagaatgcttttgaatactttgatggcaactataaaaatattggactgtgggtatgcggttcttttttttatagcagatttttgggtttatctgtggaaaactttaaacttaaataactggttggacaataccatagaatacatgggttagcgatagatggtttcaggttgtctatgactgtgtgcctttgctagctatacttctgatcttgaaaggtgtattacttattggctattgcctattgatttgaagttctgatgtagcttatttagattttttttaacatcgattatatgcagagtattaaaggttactatcaaccttacattaaccatctagctctactgaatgttccataggtcctcagccttttgaacttgagaactttgaagagaactaaaatattttagaaattaagaaatgtctttaagagagtagaagtactcagttgtacacgagaaacaagtggtacacgagattagaagtactcggttgtacacgagatacataagggtatccatgttctatatctgtgtatgcaatcattacagtattttggggaaattttgcctggggaattcaaaataaactacttttgtatgcctagaaatagctattttatgtcctcctgcaagtattgtgtggacctggcgaatgttcattggcatgacatggatgcacatacatgcaacactgcgacgagaatacgagatgcagcttagtaccatctatgatctgttaccagtactatatttacctaacttgtattttaaaacatgtaggctcttgaagttatggaacttgaccaaaaaatagaactagttcgtgagcttgatggaaacattatgcgatgtgtccgtgatcaaaatgggaaccatgttatacagaagtgcattgaatgtgttcctacagaacatattggctttgtagtatctgcttttcgggggcaggtggccagcctttcaatgcacccatatggttgccgtgttattcaggtaatttcagaataatatttgagatgtgttctgtgctagagcttggtggccagctttctcattaatctttatcctacttggtagagagttttggagcactgcggtggtgattcacaaggccagtgcataatagatgagatactggagtcggcttgcgtcctcgcacaagatcagtatggcaactatgttacacaggtaaatttgtctacaagctgatgcaatacttgctgcccaaattcctatttccttggcagtacccatcacaactgcggaataataccctgtcaatcagtcaatcctgccttgctgaaatatgataatttcaaacagtttcttgactagtaaatgatcagactgtgtgtaacagacgtagaatgcattgcatgttatgaagtgtgttggctcatttgttggcagttagcactgaaatctacatgcatatttttagtgaatgatgctataatgaagtgactgaactcaattttatgtcatcttgtattcttacttgtcagctcgttgtttttcctttctcttttgtagcatgttttggaaagaggaaggggacatgaaaggacccaaattatcagtaaattggctgggcaggttgttaccatgagtcaaaacaaattcgcatcaaatgtgatagagaagtgctttcaacatggggatatgacagagcgagatcttctgatccgggagattgtgaagcagactgagggcaatgataacttgctggtatgtttgagaagttgatactgtaaatcaaatattttcattcagttctctccctccctctctcaggcacagggagcaaagcctgaattagcgggataaccagtatgcagtagcatcccgtgtttttagcatccacgaaaaaattagataaaaaccgatatactattcactatatctaatatagcatctcttagattccacaatattctttcctgcggttttcgtacgaattgatttgctaacaaccttttacacatttaggcgatgatgaaggaccagtatgcaaactatgtagttcagaagatacttgaaacatgcaacgagcaacagagagagctcctgctcagccgtgtgaagggccatctgcaagcattaaggaagtacacctatggcaagcatattgtgagccgagttgagcaactttgtggtgaaggtgatcatcctcttctactttttacttctaactgcatcctctctttggttttcttcaaccttcaagtgcaacattcaagtgactctatttatgctttgatactttcaggagacaccgagtcagattcttgaaaaattagcatatttcttcactggaggtgtatgcctggagccctcaagatgaacaacctccagtgcttccagaagggctaacaaaactcttgtctccttcagattgtacataagtgactctcattaggtggtagcctaggtgctagatacagtttagtggtgtgcatcagtgtatctatgttaggggtttgcttatttatagaatcaataatggtactgtaatagttgggtagctgtttgcaaaagaagatttagtggcttgtatgcgataaattatcgactgcttggtaatgtaatcgcttgcttagtggcttgaatcgcagctgtgcgccaatttgatgtgtccaatcatgtgatattgtgatgcatatatttgctagatttataggcagaagctgttcatccgctatgaagaaaaggtatataattcaagaacg</dnaseqindica> |
| External Link(s) |
