Difference between revisions of "Os08g0525600"

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(Created page with "{{JaponicaGene| GeneName = Os08g0525600| Description = Similar to Peptidylprolyl isomerase| Version = NM_001068827.1 GI:115477392 GeneID:4346090| Length = 4480 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0525600|
 
GeneName = Os08g0525600|

Revision as of 20:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0525600

Description

Similar to Peptidylprolyl isomerase

Version

NM_001068827.1 GI:115477392 GeneID:4346090

Length

4480 bp

Definition

Oryza sativa Japonica Group Os08g0525600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26226536..26231015

Sequence Coding Region

26226642..26226846,26227629..26227715,26228366..26228626,26228699..26228773,26228860..26228940
,26229029..26229223,26229340..26229429,26229543..26229718,26229812..26229934
,26230046..26230192,26230274..26230398,26230491..26230611,26230709..26230765

Expression

GEO Profiles:Os08g0525600

Genome Context

<gbrowseImage1> name=NC_008401:26226536..26231015 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26226536..26231015 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgacgacttcgagatgccgccgcccggcgccgacgacgacttgatgatgggggaggacgggatgggcgacttcggcggcgccgacgggccgccgctgaaggtcggagaggagaaggagatcgggaagcagggtctcaggaagaagctgctcaaggagggcgaggggtgggagacccccgaggtcggcgacgaggtcgaagtacactacactggcacactgcttgatggaaagaagtttgattcaagccgtgaccgtgggacacccttcaagtttaagttgggacaaggtcaagtgataaaaggttgggatctaggtatcaagaccatgaagaaaggcgaaaatgctgttttcaccattcctcctgatttggcctatggtgaatctggttcacctccaactattccagccagtgccacactgcagtttgatgttgagttgctttcttggacaagtgtcaaggacatttgccaagatggtggtatattcaagaagatactgaaggagggagaaaaatgggagaacccaaaagatcttgatgaagtatttgtgaaatatgaggctcggcttgaggatggcactgttatatcaaagtctgagggcgctgaatttactgttaaagatggtttcttctgccctgcgctggcgaaagctgtcaaaaccatgaaaaaagcagagaaagtgctccttacagttaagccacaatatggatttggtgagaatggtagaccagcagctggtgaggaaggtgctgtgccaccaaatgccactcttcttgttaatcttgagttggtttcatggaaaacagtcacagaaataggtgatgataagaaaatcttgaagaaagttctgacggagggtacagggtatgagcggcccaatgaaggtgcagttgttaaagtcaaaataactggaaaacttcaggatggtacaatatttacaaagaaggggcatgatgaaccagagccatttgaattcaagactgatgaagaggaggtcattgatggtattgaccgtgctgtgctaaacatgaagaatggcgaggttgctcttgtaacaattcctcctgaatacgcatttggttctactgagtcaaagcaggatctcgctgtagttccaccaaacagcactgtgatttatgaggttgagcttgtatcattcgtgaaggataaagaatcttgggacttgaacaataccgagaagattgagactgctggggcaaagaaagaagaggggaatgcattgttcaagctgggcaaatatgtcagggcttcaaagcgttatgagaaggctgcaaaattcattgagtatgacagctcatttagcgaagatgagaagaaacaatccaagcaactgaaggttacctgcaacttgaacaatgctgcctgcaagctgaagctgaaagattacaagcaagctgagaagctttgcaccaaggttctggaacttgacagccaaaatgtcaaggctttatacaggagggcccaagcttacatgcaacttgctgacctagagttagcagaggtggatattaagaaggcacttgaaattgatcctgataacagggatgtgaagttgacatacaagaacctcaaggaaaaggtcaaggagtacaacaagaaggatgccaaattctacagcaatatgttcgccaagatgaccaagcagccagccgaagacggcaaagctggatctggagctgaatcgaagcaaggatcggaacctgttactgctgcctaa</cdnaseq>

Protein Sequence

<aaseq>MDDDFEMPPPGADDDLMMGEDGMGDFGGADGPPLKVGEEKEIGK QGLRKKLLKEGEGWETPEVGDEVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQGQVIK GWDLGIKTMKKGENAVFTIPPDLAYGESGSPPTIPASATLQFDVELLSWTSVKDICQD GGIFKKILKEGEKWENPKDLDEVFVKYEARLEDGTVISKSEGAEFTVKDGFFCPALAK AVKTMKKAEKVLLTVKPQYGFGENGRPAAGEEGAVPPNATLLVNLELVSWKTVTEIGD DKKILKKVLTEGTGYERPNEGAVVKVKITGKLQDGTIFTKKGHDEPEPFEFKTDEEEV IDGIDRAVLNMKNGEVALVTIPPEYAFGSTESKQDLAVVPPNSTVIYEVELVSFVKDK ESWDLNNTEKIETAGAKKEEGNALFKLGKYVRASKRYEKAAKFIEYDSSFSEDEKKQS KQLKVTCNLNNAACKLKLKDYKQAEKLCTKVLELDSQNVKALYRRAQAYMQLADLELA EVDIKKALEIDPDNRDVKLTYKNLKEKVKEYNKKDAKFYSNMFAKMTKQPAEDGKAGS GAESKQGSEPVTAA</aaseq>

Gene Sequence

<dnaseqindica>107..311#1094..1180#1831..2091#2164..2238#2325..2405#2494..2688#2805..2894#3008..3183#3277..3399#3511..3657#3739..3863#3956..4076#4174..4230#atcgcctcgtgctcctctcgaaccttccaaagtccaaaccctagtggtgacctcgcctcggcctcgaaaccctagccgcagatctcgcctctccttgccccgcgccatggacgacgacttcgagatgccgccgcccggcgccgacgacgacttgatgatgggggaggacgggatgggcgacttcggcggcgccgacgggccgccgctgaaggtcggagaggagaaggagatcgggaagcagggtctcaggaagaagctgctcaaggagggcgaggggtgggagacccccgaggtcggcgacgaggtcgaaggtattgcgtggttcctcgcctcctcctcctcctcaaatcgtggagttgatccaaccagtgccttgcgtgttggggtttagaactttagatgtgttcgttgtgggatgcagagttagttttggactttggcgtgccatgcgttggggtttatgggatatttggatgcggaattagtgctaaatttaggtggaatttggtgttatcttcactgcttggtcttatgatgatgtcgatttcgagttagattgggacatctgcttagtgtttataatctgatcatgtgttttggttttgctagctttgcaacagtgcgagtttatatttaggtgaaatttggtgccatcttcaccacttgtctgatcgatctcatgttcatttcgagctagattggaacattaatctagtttactgtttaatctgattacgcattttgcttttgctagttacacttacactgcgacattattgtgagtttatgttggcagagagagtataaattctgttgcaattgcttgtttgcttgtacggttgtgtgaccttacagtttcggggagatggtttctgaaggagggatgattgtggcatacctacaatgttaatgttgttgctgatgtatggttttttttagggaaaaactaaatgcctgtattatttgctgtttaacaactttattgttccatgatgatagcggattgatttatagatcagatttaccctgtcattagtgtttatcttagaatttgtgtaactgaatcggactgaacctttcttctatgtttcagtacactacactggcacactgcttgatggaaagaagtttgattcaagccgtgaccgtgggacacccttcaagtttaagttgggacaaggtacaattccttctccattctgccttcttactttttgatggcacatctcatagccaatgtgatcgcaacttgtgccaatcaccattttgtgcaaatttttgggcatggtttcagtcatctattcatatttctgtttacatgctactagttttgatgtttactaatcttttgatatgttattcttctcaaatagaaatgactgtattacagatacctctgagataagggctcttaatacctagttcgtttttcactgggaagtaaaaccgtgattgtttccagtcccggagcatgtttaatggccctgtggctgatatcacccagtgatgctcaactgtaacactgcactgatcactttagtctgtcaattgctggtgctattacaattttggggatcagctttttcattaggtagagaatgtagcagcagtggtgtttaacttgttgaccttactagaggttgaatggactgtttctgtttaaaaaattgctctaaattaagtaagagaccaatattgttttattctcagtatagacccacataccatttcacaagcttttttttctctgctatgtgcttgtgatggtgggattgcaaaatctatttttctgttaaatgctcaccagctatttcttgaacttgtatccaggtcaagtgataaaaggttgggatctaggtatcaagaccatgaagaaaggcgaaaatgctgttttcaccattcctcctgatttggcctatggtgaatctggttcacctccaactattccagccagtgccacactgcagtttgatgttgagttgctttcttggacaagtgtcaaggacatttgccaagatggtggtatattcaagaagatactgaaggagggagaaaaatgggagaacccaaaagatcttgatgaagtatttggtaatatttgctcattgaaacatattgctatcttatatattgccctgtagctgaccctttgcattgctgtagtgaaatatgaggctcggcttgaggatggcactgttatatcaaagtctgagggcgctgaatttactgttaaagatggtgattacccataatctccttgtcaacatttcctgttcattattgagcaatcagctgcttgctaacgaaataaagtttggttccaggtttcttctgccctgcgctggcgaaagctgtcaaaaccatgaaaaaagcagagaaagtgctccttacagttaagccacaatgtaagcttctttggtttcacaccttttccatggttttccatctcttccttcgagttgattgaaaagatttaaaactttgtaatggcagatggatttggtgagaatggtagaccagcagctggtgaggaaggtgctgtgccaccaaatgccactcttcttgttaatcttgagttggtttcatggaaaacagtcacagaaataggtgatgataagaaaatcttgaagaaagttctgacggagggtacagggtatgagcggcccaatgaaggtgcagttgttaaaggtatgccaaagcgtgatgcttactgatcttactattttctttcctatatgtcagatagaggtcaacagtgtctgattactacctgtaatgacaaagttgcatttactgtttgacagtcaaaataactggaaaacttcaggatggtacaatatttacaaagaaggggcatgatgaaccagagccatttgaattcaagactgatgaaggtgctttgtcaacttcctctatgctggccatacacttttaagttcaaacaaataatgttcttactctgataagtagtaacaacttgttcccttttgatttactttccttccagaggaggtcattgatggtattgaccgtgctgtgctaaacatgaagaatggcgaggttgctcttgtaacaattcctcctgaatacgcatttggttctactgagtcaaagcaggatctcgctgtagttccaccaaacagcactgtgatttatgaggttgagcttgtatcattcgtgaaggtgtgcttctctttatgctatatatttgtttgcatttcttttagttgctatgatgagtgcacaggaaaaccaattattattcatggtacacaggataaagaatcttgggacttgaacaataccgagaagattgagactgctggggcaaagaaagaagaggggaatgcattgttcaagctgggcaaatatgtcagggcttcaaagcgttatgagaaggtatggcatgcttcttttgttgaacacttgttcaaataactaatctttcgtcaagattttctttgttttcataatcccttactgactgatgatctatctattttattccaggctgcaaaattcattgagtatgacagctcatttagcgaagatgagaagaaacaatccaagcaactgaaggttacctgcaacttgaacaatgctgcctgcaagctgaagctgaaagattacaagcaagctgagaagctttgcaccaaggtacattcagttcttcctgcaaaagacccatttgttatgtgttttggtaaaccaaggtaacattctggtgtttgttgccaggttctggaacttgacagccaaaatgtcaaggctttatacaggagggcccaagcttacatgcaacttgctgacctagagttagcagaggtggatattaagaaggcacttgaaattgatcctgataacaggcaagttttgtatatgcgtctccccaagggaggcatactagttttagtagtcactccattttgaaactgatcttgtcactgcttatcttcagggatgtgaagttgacatacaagaacctcaaggaaaaggtcaaggagtacaacaagaaggatgccaaattctacagcaatatgttcgccaagatgaccaagcagccagccgaagacggcgtaagcagctcgtcccatcttaattgcgaaactctgaagctctatacttttcacaaccctcaagtctgttctaattcggttttcttctgattcgcagaaagctggatctggagctgaatcgaagcaaggatcggaacctgttactgctgcctaaggacaggacactcacgacatatcttagattttgtgtgctggctaatctttgttctagtggtgcactgatgagaaacgttacttcccaagttgtcgggcgatgatgattcttgttgagattttcaaattgcaatccatatttgaaccaatctcgtcaagtttctagtgtctttctggatgaatgttacaaccatacgccatgtcgggtccagtttgccacgaaagatcaagagagcattagctgagatgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0525600, RefSeq:Os08g0525600