Difference between revisions of "Os08g0532400"

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(Created page with "{{JaponicaGene| GeneName = Os08g0532400| Description = Similar to AT.I.24-7 protein| Version = NM_001068874.1 GI:115477486 GeneID:4346138| Length = 5164 bp| Definition = ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0532400|
 
GeneName = Os08g0532400|

Revision as of 20:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0532400

Description

Similar to AT.I.24-7 protein

Version

NM_001068874.1 GI:115477486 GeneID:4346138

Length

5164 bp

Definition

Oryza sativa Japonica Group Os08g0532400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26625677..26630840

Sequence Coding Region

26625900..26626235,26628309..26629246,26629986..26630499

Expression

GEO Profiles:Os08g0532400

Genome Context

<gbrowseImage1> name=NC_008401:26625677..26630840 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26625677..26630840 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggaggtggggggaagggtgagggggttcgtgcggaacaggtggctggtgttcgtggcggcgatgtggatgcagtcgttcgccggggtggggtacctgttcgggagcatctcgccggtgatcaaggcctcgctggggtacaaccagcgggaggtggcggggctcggggtcgccaaggacctgggcgacagcgtcggcttcctcgccggcacgctctccgccgtgctcccgctctgggccgcggtcctcgtcggcgccgcgcagaacctcttcggctacggctgggtctggctcgccgtcacccaccgcgcccccgtgcccccgctctgggcgatgtgcattcttatctttattggtactaatggtgagacatacttcaatacggctgctctcgtctcatgtgttcagaacttccccaagagccgtggaccgattgtcggtatcctcaagggatttgctggtttgagtggtgcaatcctaacgcagatgtatgcgatgatacattcacctgatcatgcggcattgatcttcatggttgctgttggtccaacaatggtggttattgcgctaatgttcattgtcagaccagttggaggacacaggcaagtgcggccttctgatggtacaagtttcacgtttgtatacagtgtctgcttgcttttggctgcttatctgatgggtgtgatgatactgggggaccttgtcgacttgagccacacagtgatggtcttgttgaccatcattctaatcgtcctcttgatagttccaatagtcatccctgtgatactcagcttcttctcagataacgatgagagtgcctatgcatcactgttgcaatcaccagggaaagaagaagcaagtgcgtcaacaccatctgaagagcaaactgaggttatattcagtgaggtggaggatgaaaagccaaaggaagtggatctacttccagcctcagagaggcagaagaggatagctgaattgcagacaaagctattccaggcagctgctgttggcgctgtcagggtcaagaggagaaaaggtccacgaagaggagaggatttcacattgatgcaggcattgatcaaggcagatttttggctactattcttctcccttctgttgggatcaggatcaggtcttactgtgatagataatcttgggcaaatgagccagtcattgggttatgaggatagtcacatttttgtctcgatgattagcatctggaacttccttggacgcattggtgggggctacttttcagagcttattgtcaaggactatgcatatccaagggctattgcgttagcgacagctcaagtatttatggcatttgggcacttctcctttgcaatggcttggccgggtgcaatgtacatcggcacactgcttgttggtcttggctatggtgcccactgggcaattgtgccagctgcagcctccgaactcttcggcctgaagaacttcggagcattgtacaacttccttaccgtcgcgaatccagcaggctcccttgtattctcaggcattattgccagtggcatatacgactctgaagctgagaagcaggctcaccagcaccataactcgacattgctggcaatgcctgggagattgcttgccatggcctcggatgctactcagccattgaagtgtgagggggccatctgcttcttcctttcgtctctgatcatgtctgggttctgcattgttgctgctgtcctgagcttgatcctcatctaccggacgaagattgtgtacgccaatctgtatgggaaccccaggacatga</cdnaseq>

Protein Sequence

<aaseq>MVEVGGRVRGFVRNRWLVFVAAMWMQSFAGVGYLFGSISPVIKA SLGYNQREVAGLGVAKDLGDSVGFLAGTLSAVLPLWAAVLVGAAQNLFGYGWVWLAVT HRAPVPPLWAMCILIFIGTNGETYFNTAALVSCVQNFPKSRGPIVGILKGFAGLSGAI LTQMYAMIHSPDHAALIFMVAVGPTMVVIALMFIVRPVGGHRQVRPSDGTSFTFVYSV CLLLAAYLMGVMILGDLVDLSHTVMVLLTIILIVLLIVPIVIPVILSFFSDNDESAYA SLLQSPGKEEASASTPSEEQTEVIFSEVEDEKPKEVDLLPASERQKRIAELQTKLFQA AAVGAVRVKRRKGPRRGEDFTLMQALIKADFWLLFFSLLLGSGSGLTVIDNLGQMSQS LGYEDSHIFVSMISIWNFLGRIGGGYFSELIVKDYAYPRAIALATAQVFMAFGHFSFA MAWPGAMYIGTLLVGLGYGAHWAIVPAAASELFGLKNFGALYNFLTVANPAGSLVFSG IIASGIYDSEAEKQAHQHHNSTLLAMPGRLLAMASDATQPLKCEGAICFFLSSLIMSG FCIVAAVLSLILIYRTKIVYANLYGNPRT</aaseq>

Gene Sequence

<dnaseqindica>224..559#2633..3570#4310..4823#gacgtcgtctcgtcctcctccccgtctccccgagttgccgagctcgtctcgtccatagaaacgcagcgaattctcgccggatttctcctcctcctccgtgttccaatctgctctgctttctcggctcgtgctggattaccagtagcaatcactgtttcggcaggtgggggggatcgtcggcgtacaccaatccgccgtggttggaggtggtggtggtgcagcaatggtggaggtggggggaagggtgagggggttcgtgcggaacaggtggctggtgttcgtggcggcgatgtggatgcagtcgttcgccggggtggggtacctgttcgggagcatctcgccggtgatcaaggcctcgctggggtacaaccagcgggaggtggcggggctcggggtcgccaaggacctgggcgacagcgtcggcttcctcgccggcacgctctccgccgtgctcccgctctgggccgcggtcctcgtcggcgccgcgcagaacctcttcggctacggctgggtctggctcgccgtcacccaccgcgcccccgtgcccccgctctgggcggtcagtctcagatcccttcccttccctttccgcttccacctctcatcttcattgcaggcagccgcatgtgctacagtctatctcatgatctaccacatgcttgctactcatctctagcatttttctgcctgcgacttctttttttttttttgttattgaagcgtgcacgttggttagtgtggaaattatgttgaaaattttacaggcttgtttaacaatgtgtgtagtggactagtggttcgtcaggttttaatttacttctactgggttttgtacggttcaagtttctaggattgggatctgcaaactattcatacctccttgtttggggattggagatactatttgcagttggactccagtacagtgttcaatcatggagaagaaactttgttagatgttcaaacactctgaaaatgaaacgcttttgatctaaaatactgaatttatattcagaaatcactatcagaatttcattggctcaaacaatttttttctcatgttgtatgacatgtgtgaagaatatttccaacatacgacctgttgaatacttgaatatgtttccttgtctgtagaaacagttagtggttgctttcttgcttcccatgtgcctttgattataccttaatttacatatctcatgagaactttttatttgaacaatattcagcctagaacttcaccatccccaatcagtatctgtgaaggatagtagaatacacctgtctgaatcacctaaacttttgtgaataataagtgaaatagcatcgtgtgtttgcaagagcaagttcccaacactttcctatctttttccgtgcgcatgcttttcaaactactaaacggtgcatttttcgcaaaaagtttctatataaaagttgtttaaaaaaatcatattgatccattttttttaaaaaaattaactaatacttaattaatcacgcgctaatggaccactccgttttccgtgtatgggatatgggtttccaacacccacctccaaacacagccggtaatatttcgaagccttaaatgttaaatctccatatgcaggtaatatttctggtacatgtctctaatagctactgcattttgaaaaatgttgaagtttctaagattagaatcaggaagtagtaacttcccatgccaaatgtgggaggacttagtaggcacaagattagtgtccttgtctagatggtattgttttctatatgtttcaggaagaccatattttcccttttcccattaggcaaacatggtctgattaacttctgaactgaaatcttgttgatctaaaaacaatgaatgtttagggtacacttctattacatattctcaacaaaagatatacttaaactgaaaattatgttcacacttcaggaaccattctgagtgctcattgtttcaaagagtagatttatcggggaatttgcagtgttgtactcagaatatgcaggattttgatgtctcactatattcagttcgaatagttgaaaattttagattttccgttgatttttttagctgtatgatgcattagagtaattaatagcttgttgaaatgttagtcaccactttttttttaaggaaatagatttcacttcactaccttctgtttcatttggttttaattcatgcattcagcgtctaatatcgatattttggcgccaagatctttcttgatccaactatgcatttcaaggtacacccaatagggctggaatacaattccctttgcatgtggaaagactaataccacaattacgttagtccattctttttcttttgaataagaagaagggcaaaagcttttgcctcttatgtattaatagagcaagaaggacatttacaaagatttctgccagtctacagactaaactgaggcaaagatgctctagtcgagtgctaaatcgtagcctcttccaccattgcttttgctatttcagttggtggcatttggaatctcacacgattgccatatatgatatgaacagatctatatttacctttcacattccttcaattttattcatgttgattcttgtgctgaaagcctctcatctcatctctcaacagatgtgcattcttatctttattggtactaatggtgagacatacttcaatacggctgctctcgtctcatgtgttcagaacttccccaagagccgtggaccgattgtcggtatcctcaagggatttgctggtttgagtggtgcaatcctaacgcagatgtatgcgatgatacattcacctgatcatgcggcattgatcttcatggttgctgttggtccaacaatggtggttattgcgctaatgttcattgtcagaccagttggaggacacaggcaagtgcggccttctgatggtacaagtttcacgtttgtatacagtgtctgcttgcttttggctgcttatctgatgggtgtgatgatactgggggaccttgtcgacttgagccacacagtgatggtcttgttgaccatcattctaatcgtcctcttgatagttccaatagtcatccctgtgatactcagcttcttctcagataacgatgagagtgcctatgcatcactgttgcaatcaccagggaaagaagaagcaagtgcgtcaacaccatctgaagagcaaactgaggttatattcagtgaggtggaggatgaaaagccaaaggaagtggatctacttccagcctcagagaggcagaagaggatagctgaattgcagacaaagctattccaggcagctgctgttggcgctgtcagggtcaagaggagaaaaggtccacgaagaggagaggatttcacattgatgcaggcattgatcaaggcagatttttggctactattcttctcccttctgttgggatcaggatcaggtcttactgtgatagataatcttgggcaaatgagccagtcattgggttatgaggatagtcacatttttgtctcgatgattagcatctggaacttccttggacgcattggtgggggctacttttcagagcttattgtcaagtaagaaatctacagtagctgtttactgaaattaaaaatatacttcctccgtttcatattataagactttatagcaatgcccatattcatatatatgttaatgaatctacacatatagattcattaacatatatatgaatgtgggcattgctagaaagttttataatatgaaacggggggagtatatctttgtgatccatctgatgattaatattatttagcgcataaggagcagcatctaatgattcgtattgtttggttcatacggaagtgaaagtgaaactatggaatgacatccaattgcaaattgcataatgcaagtatgaatgctttcggcagcacaaacatagcgtttgctgggtatatggcatttcttgctggtcaatatttttgtaaaccatgagtaatcgtttattccattagtttttgttcaaatgcattttttttcctgactgagtaaaacaaacattctactctttgttccagtgcatgtgctcacaaagaagacaaaaaactaagtgcaagaaactaaaatgacaactaaatactcccttcgtccctaaatatttgatgccgttgacttttttaaacatgtttgaccgttcgtctaaatatttagtgacggagggagtacaagaaactagtattgtactctttgtttacttgtccttttaaactggcacccttttatctttgtattaattctaatctgatccctttttctctgatcctttttcagggactatgcatatccaagggctattgcgttagcgacagctcaagtatttatggcatttgggcacttctcctttgcaatggcttggccgggtgcaatgtacatcggcacactgcttgttggtcttggctatggtgcccactgggcaattgtgccagctgcagcctccgaactcttcggcctgaagaacttcggagcattgtacaacttccttaccgtcgcgaatccagcaggctcccttgtattctcaggcattattgccagtggcatatacgactctgaagctgagaagcaggctcaccagcaccataactcgacattgctggcaatgcctgggagattgcttgccatggcctcggatgctactcagccattgaagtgtgagggggccatctgcttcttcctttcgtctctgatcatgtctgggttctgcattgttgctgctgtcctgagcttgatcctcatctaccggacgaagattgtgtacgccaatctgtatgggaaccccaggacatgaagaatatcatcagtcaagacccagaaggaaacaaaatttataaatgttatcaacgcatatactactatctcggattttcaccccaagtcctgttgattcgttggagagcagaagggtgaagttttgttatcttccttctgtttctgagaggcattcttgcgctatcataagttaatgaagttatcagtggctactgaaagaacgatcgttgttcagtatcttgaagtatcgacgtgtaccggtgcacggtggagatgtgttttgcttttcaacttttgctgtgtaaaaactttaaaaatcgcatgtatacatgtacaaatagcgttgctttgtcaaggagg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0532400, RefSeq:Os08g0532400