Difference between revisions of "Os08g0533300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0533300| Description = Amino acid-binding ACT domain containing protein| Version = NM_001068880.1 GI:115477498 GeneID:4346144| Length = 232...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0533300|
 
GeneName = Os08g0533300|

Revision as of 20:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0533300

Description

Amino acid-binding ACT domain containing protein

Version

NM_001068880.1 GI:115477498 GeneID:4346144

Length

2329 bp

Definition

Oryza sativa Japonica Group Os08g0533300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26660384..26662712

Sequence Coding Region

26660384..26660457,26660577..26660715,26660736..26660850,26661008..26661075,26661154..26661798
,26662174..26662278,26662362..26662712

Expression

GEO Profiles:Os08g0533300

Genome Context

<gbrowseImage1> name=NC_008401:26660384..26662712 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26660384..26662712 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctgtgggtctcccagcactgaggtggtcgatgagttcgagaagcttgtcattagaatgaaccctccaagggtcactgtggataatacctcggacatgactgccaccttggtgaaggcaagcaacacttctctgttcttggttcttgataattcttgcaggttaattcagagcatttcttgggaagaatttttttctcagacaggagaggtggacagtgcaaacaagtatgggaccttgctggaggtggttcaggtgctgactgaactgaagctgaccataaaaagggcctacatttcctctgatggagagtggttcatggatgtgttccatgtcgtggatcaggatgggaataaactttatgatggccaagtcattgacagaattgagctgtcgctgggagctgggtcgctgagtttccgggcgccgccggagaggtcggtggaggtggaggcggaggcggcggcggcgcagacggccattgagctgatcggtaaggaccggccggggctcctgtcggaggtgttcgccgtgctcaccgacctcaagtgcaacatcgtgtcgtcggaggtgtggacgcacgacgcgcgcatggcggcgctggtgcacgtcacggacgccgacacgctcggcgccatcgacgaccaggaccgcctcgacacggtcaagcgcctgctccgccacctcctccgcggcggcggcgccggcgcgcgcgaccggaaggccaccgcccgcgccgccatccccgcgccgcgccgcgacggcgcggcggcgcacgccccgcgccgcctccaccagatgatgcacgacgaccgcgccgccgccgccccccagccctcctcctcctccggcgacggcggcggccgcggccgccccgtcgtggaggtcgtcgactgcgccgagcgcgggtacaccctcgtgaacgtgcggtgccgcgaccgcccgaagctgctgttcgacaccgtgtgcacgctcaccgacatgcagtacgtcgtcttccacggcaccgtcatcgccgagggctccgaggcgtaccaggagtactacatccgccacctcgacgacagccccgtcacctccggcgacgaacgcgaccgcctcggccgctgcctcgaggcggccatccaacgccgcaacaccgaggggctgaggctggagctgtactgcgaggacagggtcgggctgctgtccgacgtgacgcggatattccgggagcacgggctgtcggtgacgcacgccgaggtggcgacgcggggcgcgcgcgcggcgaacgtgttctacgtggtggcggcgtcgggggagcccgtggaggcgcacgccgtggaggcggtgcgcgcggagatcggcgagcaggtgctgttcgtcagggaggacgccggcggcggcgagcccaggtcgccgcccggtcgcgatcgccgatccctcggcaacatgatcaggtcacggtcggagaagttcctctacaacctcggcctcatcagatcgtgctcctag</cdnaseq>

Protein Sequence

<aaseq>MACGSPSTEVVDEFEKLVIRMNPPRVTVDNTSDMTATLVKASNT SLFLVLDNSCRLIQSISWEEFFSQTGEVDSANKYGTLLEVVQVLTELKLTIKRAYISS DGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAEAAAAQT AIELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAIDDQD RLDTVKRLLRHLLRGGGAGARDRKATARAAIPAPRRDGAAAHAPRRLHQMMHDDRAAA APQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVF HGTVIAEGSEAYQEYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEGLRLELYCED RVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVEAVRAEIG EQVLFVREDAGGGEPRSPPGRDRRSLGNMIRSRSEKFLYNLGLIRSCS</aaseq>

Gene Sequence

<dnaseqindica>1..74#194..332#353..467#625..692#771..1415#1791..1895#1979..2329#atggcctgtgggtctcccagcactgaggtggtcgatgagttcgagaagcttgtcattagaatgaaccctccaaggtattttagtcctttccattcttcttccatctcttcttcttcttcttcctcttccatggtgtttctctctgcactttgaccctgttaaccgtgctgagttacgttcttccttcttgcagggtcactgtggataatacctcggacatgactgccaccttggtgaaggcaagcaacacttctctgttcttggttcttgataattcttgcaggttaattcagagcatttcttgggaagaatttttttctcagacaggagaggttgtcattcttttctgcaggtggacagtgcaaacaagtatgggaccttgctggaggtggttcaggtgctgactgaactgaagctgaccataaaaagggcctacatttcctctgatggagagtggttcatggatggtgagtgctttgcaaacctcccctttcttagaaagattaaggattggaaagaaagaaagatcgtgcctcttttttctgatctagctcttgtagatgttgcaatctttggcatcttttgatgatgatgtgatttgtgtgttgctcaccttttgtgaagtgttccatgtcgtggatcaggatgggaataaactttatgatggccaagtcattgacagaattgagctggtaaagtacacaagaatcaattccaagaacagagcaaagctctgcacatttgtgttaattttgatttggttttttcagtcgctgggagctgggtcgctgagtttccgggcgccgccggagaggtcggtggaggtggaggcggaggcggcggcggcgcagacggccattgagctgatcggtaaggaccggccggggctcctgtcggaggtgttcgccgtgctcaccgacctcaagtgcaacatcgtgtcgtcggaggtgtggacgcacgacgcgcgcatggcggcgctggtgcacgtcacggacgccgacacgctcggcgccatcgacgaccaggaccgcctcgacacggtcaagcgcctgctccgccacctcctccgcggcggcggcgccggcgcgcgcgaccggaaggccaccgcccgcgccgccatccccgcgccgcgccgcgacggcgcggcggcgcacgccccgcgccgcctccaccagatgatgcacgacgaccgcgccgccgccgccccccagccctcctcctcctccggcgacggcggcggccgcggccgccccgtcgtggaggtcgtcgactgcgccgagcgcgggtacaccctcgtgaacgtgcggtgccgcgaccgcccgaagctgctgttcgacaccgtgtgcacgctcaccgacatgcagtacgtcgtcttccacggcaccgtcatcgccgagggctccgaggcgtaccaggtacttcgtcactgttccatcgctgacgacgctgccatgccattgcacttcgctgcacacactctagctctaccctatagcctagctactactcctagctactagctagctaccattccactgtgcctcggtttccgcgctcacattttgaccagaaacgtgtactagagacgacgacacacaacaagctgctccgctgctacatagatactgctagatcttggcatgtgagtgacagacagagccgagaagagaagagatcctagttttgtgtgagctcgtaccaacgaacacacgagctgcacctgcactgcaactgcattgtgtcacgcgtgctgacaacatcgccgtcgtcgccggcgaaatcttttgcaggagtactacatccgccacctcgacgacagccccgtcacctccggcgacgaacgcgaccgcctcggccgctgcctcgaggcggccatccaacgccgcaacaccgaggtgagtacatcaaacaaaacaaaatggttatcatgatatcagagttaccgtgaacacggctttgacttgattggtcttagcaggggctgaggctggagctgtactgcgaggacagggtcgggctgctgtccgacgtgacgcggatattccgggagcacgggctgtcggtgacgcacgccgaggtggcgacgcggggcgcgcgcgcggcgaacgtgttctacgtggtggcggcgtcgggggagcccgtggaggcgcacgccgtggaggcggtgcgcgcggagatcggcgagcaggtgctgttcgtcagggaggacgccggcggcggcgagcccaggtcgccgcccggtcgcgatcgccgatccctcggcaacatgatcaggtcacggtcggagaagttcctctacaacctcggcctcatcagatcgtgctcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0533300, RefSeq:Os08g0533300