Difference between revisions of "Os08g0536100"

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(Created page with "{{JaponicaGene| GeneName = Os08g0536100| Description = Conserved hypothetical protein| Version = NM_001068896.1 GI:115477530 GeneID:4346160| Length = 5349 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0536100|
 
GeneName = Os08g0536100|

Revision as of 20:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0536100

Description

Conserved hypothetical protein

Version

NM_001068896.1 GI:115477530 GeneID:4346160

Length

5349 bp

Definition

Oryza sativa Japonica Group Os08g0536100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26873716..26879064

Sequence Coding Region

26875182..26876306,26876400..26876651,26877397..26877477,26877870..26878017,26878105..26878511
,26878804..26878860

Expression

GEO Profiles:Os08g0536100

Genome Context

<gbrowseImage1> name=NC_008401:26873716..26879064 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26873716..26879064 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtttgcctcaggttaatccagccgaggaagcgcctacgccgtcaagtaggcctgtgtcgagccctcgtagcttcgagggtgttggcgcctgtgatttggatgggcttcttggaggaagctcaagtagcagggtattcgaatacccgtcaatcggtgattctgatcggaagactgcattagacatcccgaatggatcaactgagtattctagagacagccattgctttgatagacctgcaggtctccgaggactaagaattgattcgagggatgcagattctagatcttctcataaattggatcctactgtccatgttcccacaatgagggttgtgggatttgagtcgggttctgttggaggttctgctataatagaaactgataattgtcatactccattcgatcagcatgaacttcaggcaaggaaaagactgctctcaccattgaaaaacgttcttaatagacagttccacggtgatatactgaatatttccgctggtgatgctagatttgaactttctgattcagccaggaaacttaacatttcgtgcttccaagatagtaaaaaagcaaacactggtatgctcgattcttttgagccacaagcctggacaaattctagatgctccaatggtagtccagaatgggatgccaataagattaattctaatttattcactgatggtcctttacttgggagcaaggagtccttagcttatcttgatcatctagctgctagtgcaaaattagcacattctccactctccttgtccccgcttagccctaaatttatgaacagaactaaggctacaggagctcaatgccgtacaatgagagatattgaacatcattttctagattcaagggaaaaagggggacccgatggaattagaatgctgagtgtgctagaagaaactaacatattacatgatgaatacaatgtcatgacccctaaaagaagttcatgcagaagatatcaaatctggggtcctgaatccacccctacttctccccgggttggttatggtcggagtttgagtctcccagtacgacggtcactagttggctcctttgaggagtcccttctatctggccggctttcttatggaaaagacaatcagataattgatggattcttagctgttctaaatattactggtggaaacttctctcctccaactcagaagctgccgttcgcagtaacaagcattgacgaggatagctccttattgtactattcttctattgatcttgctgggaggtcgtcagcaactaactgtagaagcccaaaactcgaaagaagcttaagcaataatgattcacgatcagccaaaagtcgcttacggatccctgttaagggcaggatacagctggtcgtgagcaaccctgagaagactccacttcatactttcttctgcagctatgacttgacagacatgccttcagggaccaagactttcatgcggcaaaaggtcactctgtcccccactctttcctcctctaatccaatgaaagaaggaagtaatgccggtgacattaatattggccccaaggctgagtctgtctcatgtggagaagttacagaacgggaaagttcagaatgctcatctgatggatcagaggagaaagacgcaaatgcaaaacgttgttcgttggacagtaacatgatggaatcaaataaacataactctcctgtgaataagaaaaataacaccgattctgatgattgttgctgtcagatggacaatttaggtggcaagaattattgctgtgcatcttctaggattaatgatagctcgggtggaggtgtgattcgctatgctctgcacctgcgctttctatgcccttcctccaagaaatcctcaaaatcgatgctacgatgcaaatccgatccatcatcggtgccatatgatagtaatgccgcgaaagaggacgatcgcagattctacctttataatgatcttagagttgtatttcctcaaaggcactcagatgcagatgaaggcgagctgcgtgtggaacatgacttccctgctgatcccaagtacttcgacataagcaattga</cdnaseq>

Protein Sequence

<aaseq>MGLPQVNPAEEAPTPSSRPVSSPRSFEGVGACDLDGLLGGSSSS RVFEYPSIGDSDRKTALDIPNGSTEYSRDSHCFDRPAGLRGLRIDSRDADSRSSHKLD PTVHVPTMRVVGFESGSVGGSAIIETDNCHTPFDQHELQARKRLLSPLKNVLNRQFHG DILNISAGDARFELSDSARKLNISCFQDSKKANTGMLDSFEPQAWTNSRCSNGSPEWD ANKINSNLFTDGPLLGSKESLAYLDHLAASAKLAHSPLSLSPLSPKFMNRTKATGAQC RTMRDIEHHFLDSREKGGPDGIRMLSVLEETNILHDEYNVMTPKRSSCRRYQIWGPES TPTSPRVGYGRSLSLPVRRSLVGSFEESLLSGRLSYGKDNQIIDGFLAVLNITGGNFS PPTQKLPFAVTSIDEDSSLLYYSSIDLAGRSSATNCRSPKLERSLSNNDSRSAKSRLR IPVKGRIQLVVSNPEKTPLHTFFCSYDLTDMPSGTKTFMRQKVTLSPTLSSSNPMKEG SNAGDINIGPKAESVSCGEVTERESSECSSDGSEEKDANAKRCSLDSNMMESNKHNSP VNKKNNTDSDDCCCQMDNLGGKNYCCASSRINDSSGGGVIRYALHLRFLCPSSKKSSK SMLRCKSDPSSVPYDSNAAKEDDRRFYLYNDLRVVFPQRHSDADEGELRVEHDFPADP KYFDISN</aaseq>

Gene Sequence

<dnaseqindica>1467..2591#2685..2936#3682..3762#4155..4302#4390..4796#5089..5145#gccaggaaagagaagaagaagcaattggggagaagccaagccaaggttggggaagggaagggaagggagaggagaggggctcgccgatcgatccctctccgcctccgccgtcgaaccgccgcgtcgagtcgagtcgaatcgaaggtaggtaggggcatccattcctctctcccctgtccggggttcgattggtttcttgagaggatgattcaactgttggttcacttgcttggagcgttggattcgagctcttcttgttcgctgatccaatcctaatctttctcttttttttttactcttggattgatgtctgaacttgtgaatttcagatcgagccgctcctccacatctcccactcgcggtcgccatcctccagcgtcgccgcgcgcggctgctccgcttcccgacgccgctcgccgctcctccagctcagctccccctcgcgcgcgtctccttctatctctctctccagcgaccagcggtggtggccgtctctagcgccggctgtcgttaggggagaagccgggtactcgtagtaggttctggcgtgacgttttgaaggtgagaaatcacaaaccaaaaattaatttgagattgtattgttcttttgcactgattaattgcatgaaaccctaattaggtagattgtgggtttattggtatgtattgtgttgtcctgcatgcaacacattgacaccatgtgttggcacaggcaggctctgccatggcgctggagcgaccagctgcatataaagattctgtattgagagcccaagggtagtttggtcactccatgaaagaaactgaggagaaaagaaaataaaatagataaaactctccaaagtggcaatctatcctgagatcaacatatagagtggcattttatcctatacatcctagtgagtggcattttgttgaaaccaacgatatagagtggcatatatattgtcctttttctcggcagcagcttcacaagtggatgcctcccatttcctgagctaaaacgtagagtagtactcgtgatcattagcacatcggataattttttttgagcttttgtttcatcggtgtaattaagtgttaattgtccattgattgattttgcttgtgcaggactgtgatgtgtgatccccactggcatgttgcatcctaggttcctggttgcttgctcaggctccaagttgtgcttcatctccagttgccgtggtagctatggggacatggctaggcgtggcaggatgatacctttccgcctcatgggctcgagcaggctgtacgagtgtagctccaccctcccggtgttgatcggtttcagttgatgatttctttggagactgaaagaaagattcttagggagttcatcagaaaggattggataagtgcattgtagttgtaggagtgctaggagcccaaatcggtgacatttctttcagcgtttcgctgaacatagtgtagatttgcctgcaatgggtttgcctcaggttaatccagccgaggaagcgcctacgccgtcaagtaggcctgtgtcgagccctcgtagcttcgagggtgttggcgcctgtgatttggatgggcttcttggaggaagctcaagtagcagggtattcgaatacccgtcaatcggtgattctgatcggaagactgcattagacatcccgaatggatcaactgagtattctagagacagccattgctttgatagacctgcaggtctccgaggactaagaattgattcgagggatgcagattctagatcttctcataaattggatcctactgtccatgttcccacaatgagggttgtgggatttgagtcgggttctgttggaggttctgctataatagaaactgataattgtcatactccattcgatcagcatgaacttcaggcaaggaaaagactgctctcaccattgaaaaacgttcttaatagacagttccacggtgatatactgaatatttccgctggtgatgctagatttgaactttctgattcagccaggaaacttaacatttcgtgcttccaagatagtaaaaaagcaaacactggtatgctcgattcttttgagccacaagcctggacaaattctagatgctccaatggtagtccagaatgggatgccaataagattaattctaatttattcactgatggtcctttacttgggagcaaggagtccttagcttatcttgatcatctagctgctagtgcaaaattagcacattctccactctccttgtccccgcttagccctaaatttatgaacagaactaaggctacaggagctcaatgccgtacaatgagagatattgaacatcattttctagattcaagggaaaaagggggacccgatggaattagaatgctgagtgtgctagaagaaactaacatattacatgatgaatacaatgtcatgacccctaaaagaagttcatgcagaagatatcaaatctggggtcctgaatccacccctacttctccccgggttggttatggtcggagtttgagtctcccagtacgacggtcactagttggctcctttgaggagtcccttctatctggccggctttcttatggaaaagacaatcaggtctcttattccctttcaccagatattagtatgtattagtagaatgcaaggctattgactattggtttaattcaatgttcatttcgaatgcagataattgatggattcttagctgttctaaatattactggtggaaacttctctcctccaactcagaagctgccgttcgcagtaacaagcattgacgaggatagctccttattgtactattcttctattgatcttgctgggaggtcgtcagcaactaactgtagaagcccaaaactcgaaagaagcttaagcaataatgattcacgatcagccaaaagtcgcttacggatccctgttaagggcaggatacagctggtactatattttatccttattaaaagtgaaaggtgttcttgacttattgtttcgggtgaaatgctgtttgatatttttagctgctagtgaattgtttttttcttagttgtagttgataataatgcaaaggtcttacgggaaatttcattcgacaaactctaatactgtctcataaaattttgctgccaatacttctcaatgttaaagcataaacggcagttagatcactggttgtttcatcatttgtcaataatcctgtagtacctgatcttttcacttgattatagctcaatatttatctgtaatgcttatattatgtgtttagtttgaattgtttcacatatttggacacaccaaccgtaattcactggttgtttcatcatttgtcaataatcctgtagtacctgatcttttcagttgattataactcaatatttctctgtaatgcttatattatgtgttaacttgaattgtttcacatatttagacacaccaaccgtcatttatttggataatatcctcttctattgatgccacttaagtagtgcttcgtagcatgaaaaacttaacctgaacagtgtacagaaataataccaagctgtttatcaagtgtcattgtttttaagtttctgcagttgttttagtgtgctgtacataacacctatctgtgtgcagttctgctcttgtttttgaagtaactatacatttataaacatgctatttactcaagtaataacatcaataggtcgtgagcaaccctgagaagactccacttcatactttcttctgcagctatgacttgacagacatgccttcagggaccaaggtacaagacattatgactaatttcagttttaaaaataaattgtgactaatagactttttctttggctcaaattcgaaatagccttgaagcttacttgtcatatgattgccttatttcttgttgacttggtggcaacatatgtatttgctttgggttattgttttggtcagctgagccaatattaaacaaagtcgaatacatggttgcttgcaagctttgatcttttcctataagcttagtcaaaggttatcacacacataatgggtcagaatgtaatattacattattaatcattcacaatgacagagaacaagtgttttgaagcttgcagttttggtttctccatctccatccccaattctcatcttatttctcttgttgtaatgggacagactttcatgcggcaaaaggtcactctgtcccccactctttcctcctctaatccaatgaaagaaggaagtaatgccggtgacattaatattggccccaaggctgagtctgtctcatgtggagaagttacagaacgggaaagttcagaatgtaatggtgctgatagcccgatacgactagtagctcagtccaaactacttatctcgagtcaactgatagattattttgtctttgcaggctcatctgatggatcagaggagaaagacgcaaatgcaaaacgttgttcgttggacagtaacatgatggaatcaaataaacataactctcctgtgaataagaaaaataacaccgattctgatgattgttgctgtcagatggacaatttaggtggcaagaattattgctgtgcatcttctaggattaatgatagctcgggtggaggtgtgattcgctatgctctgcacctgcgctttctatgcccttcctccaagaaatcctcaaaatcgatgctacgatgcaaatccgatccatcatcggtgccatatgatagtaatgccgcgaaagaggacgatcgcagattctacctttataatgatcttagagttgtatttcctcaaaggcactcagatgcagatgaaggcgaggtatgcacccattccaatattgtgaacatcatctaccagtacagctttcttctggtttctttcttggataatcagtttctcactttacatatatagaaatgtatttggtttagcataatgtcttactttgggctactcccaacttatttcagcagccggttcctgacaattaactgagtttataatgcaatatatcatctctatctggcttgattgcaactcttgtttcttgatctgttactacattttatcctaaagagttttgatgtgttggttttcacttttgtttcagctgcgtgtggaacatgacttccctgctgatcccaagtacttcgacataagcaattgacacctctgcttctcctccttgtgcatgcagctaagctctcatgtcatttgtgtacatagcatgcgctttcttgcgcacaaaaaaaaaatgtaaatatctttttaatccttcttaacttgtcatcactcatcagcccccgatgtatttatcagtcgcaaccaactgtacagtttcagtcttcaaataaaatgcaacttttagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0536100, RefSeq:Os08g0536100