Difference between revisions of "Os08g0549200"
(Created page with "{{JaponicaGene|
GeneName = Os08g0549200|
Description = Glycoside hydrolase, family 35 protein|
Version = NM_001068975.1 GI:115477688 GeneID:4346248|
Length = 4552 bp|
Def...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0549200| | GeneName = Os08g0549200| | ||
Revision as of 20:54, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0549200 |
|---|---|
| Description |
Glycoside hydrolase, family 35 protein |
| Version |
NM_001068975.1 GI:115477688 GeneID:4346248 |
| Length |
4552 bp |
| Definition |
Oryza sativa Japonica Group Os08g0549200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:27648636..27653187 |
| Sequence Coding Region |
27648696..27648977,27649081..27649193,27649310..27649376,27649557..27649649,27649763..27649906 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:27648636..27653187 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:27648636..27653187 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtccgcggccgcggtgctcgccgtcgtcgccgccgccgtcgcagcgctcgccgcggcggcgtcgggctacgagctgaccaagaacgggaccgtcatcacctacgaccgccggtcgctgatcatcgacggccaccgggagatcttcttctccggctccatccactacccgcggagcccgccggacacgtggcccgacctcatcagcaaggccaaggagggcggcctcaacgtcatcgagagctacgtcttctggaacggccatgagcccgagcagggcgtctacaattttgaagggaggtatgatttgatcaagttcttcaagctgatccaggagaaggagatgtacgccattgtcaggatcgggcccttcgtgcaggctgaatggaaccatggaggtctgccatattggctccgggagatccctgacattatcttccggacgaacaatgagcctttcaagaagtacatgaagcagtttgtcactctcatagtgaacaagctcaaggaagcaaagctcttcgcatcacaaggaggccccatcattctggcacagattgagaatgagtaccagcacctggaggtggcattcaaagaggctggcaccaagtacatcaactgggcagctaagatggccatcgcaaccaacactggtgtcccgtggatcatgtgcaagcagactaaagctcctggtgaagtgatccctacctgcaatgggaggcactgtggagatacttggccgggtccagctgacaagaagaagcccctcttgtggactgaaaactggactgctcagtacagagttttcggtgatccaccgtcccaacgttctgcggaggacattgccttctccgtggcgcgcttcttctccgttggcggcacaatggcaaactactacatgtaccatggaggaaccaactttggaaggaacggcgccgcgttcgtgatgccgagatactacgacgaggcccccctcgacgaattcggcctgtacaaggagcctaaatggggccatctcagggacctgcaccacgctctccgtcactgcaagaaggccctcctctggggcaacccctccgttcagcccctcggcaaactctacgaggctcgggtgttcgagatgaaggagaagaacgtgtgcgtggcgttcctgtcgaaccacaacaccaaggaggacgggacggtgacgttcagggggcagaagtacttcgtggcgcggcggtcgatcagcatcctcgccgactgcaagacggtggtgttcagcacgcagcacgtcaactcgcagcacaaccagcgcaccttccacttcgccgaccagacggtgcaggacaacgtgtgggagatgtacagtgaggagaagatcccccgctacagcaagacctccatccgcacacagaggccactcgagcagtacaaccagaccaaggacaagaccgactacctctggtacaccaccagcttccggctggagacggacgacctgccgtaccggaaggaggtcaagccggtgctggaggtgagcagccatggacacgccatcgtggcgtttgtcaatgacgctttcgtagggtgcgggcacgggacgaagatcaacaaggcgttcacgatggagaaggcgatggatctcaaagtgggcgtcaaccacgtcgccatcctctcctccacgctgggtctcatggacagtgggtcatacctggagcaccggatggccggggtgtacacggtgacgatccgggggctgaacacggggacgctggacctgacgacgaacgggtgggggcacgtggtggggctcgacggcgagcggcggcgggtgcactcggagcaagggatgggcgcggtggcgtggaagcccgggaaggacaaccagccgctgacgtggtaccggcggcggttcgacccgccgtcggggaccgacccggtggtgatcgacctcacccccatggggaagggcttcctcttcgtcaacggcgagggcctcggccgctactgggtctcctaccaccacgccctcggcaagccgtcgcagtacctctaccacgtcccgaggtcgctgctccgccccaagggcaacacgctcatgttcttcgaggaggaagggggcaagcccgacgccatcatgatcctgacggtgaagcgggacaacatctgcaccttcatgacggagaagaacccggcgcacgtccggtggtcgtgggagagcaaggacagccaacccaaggcggtggccggcgccggcgccggcgccggcggcctcaagccgacggcggtgctgtcgtgcccgaccaagaagaccatccagtccgtggtgttcgccagctacggcaacccgctcggcatctgcggcaactacaccgtcggcagctgccacgcgccgcgcaccaaggaggtggtcgagaaggcctgcatcggccggaagacctgctccctcgtcgtctccagcgaggtctacggcggcgacgtccactgccccggcaccaccggcacgctcgccgtccaggccaagtgctccaagaggcctcctcgttccgccgccaccgcgcaataa</cdnaseq> |
| Protein Sequence |
<aaseq>MSAAAVLAVVAAAVAALAAAASGYELTKNGTVITYDRRSLIIDG HREIFFSGSIHYPRSPPDTWPDLISKAKEGGLNVIESYVFWNGHEPEQGVYNFEGRYD LIKFFKLIQEKEMYAIVRIGPFVQAEWNHGGLPYWLREIPDIIFRTNNEPFKKYMKQF VTLIVNKLKEAKLFASQGGPIILAQIENEYQHLEVAFKEAGTKYINWAAKMAIATNTG VPWIMCKQTKAPGEVIPTCNGRHCGDTWPGPADKKKPLLWTENWTAQYRVFGDPPSQR SAEDIAFSVARFFSVGGTMANYYMYHGGTNFGRNGAAFVMPRYYDEAPLDEFGLYKEP KWGHLRDLHHALRHCKKALLWGNPSVQPLGKLYEARVFEMKEKNVCVAFLSNHNTKED GTVTFRGQKYFVARRSISILADCKTVVFSTQHVNSQHNQRTFHFADQTVQDNVWEMYS EEKIPRYSKTSIRTQRPLEQYNQTKDKTDYLWYTTSFRLETDDLPYRKEVKPVLEVSS HGHAIVAFVNDAFVGCGHGTKINKAFTMEKAMDLKVGVNHVAILSSTLGLMDSGSYLE HRMAGVYTVTIRGLNTGTLDLTTNGWGHVVGLDGERRRVHSEQGMGAVAWKPGKDNQP LTWYRRRFDPPSGTDPVVIDLTPMGKGFLFVNGEGLGRYWVSYHHALGKPSQYLYHVP RSLLRPKGNTLMFFEEEGGKPDAIMILTVKRDNICTFMTEKNPAHVRWSWESKDSQPK AVAGAGAGAGGLKPTAVLSCPTKKTIQSVVFASYGNPLGICGNYTVGSCHAPRTKEVV EKACIGRKTCSLVVSSEVYGGDVHCPGTTGTLAVQAKCSKRPPRSAATAQ</aaseq> |
| Gene Sequence |
<dnaseqindica>61..342#446..558#675..741#922..1014#1128..1271#1472..1566#1732..1837#1940..2024#2126..2244#2354..2706#2789..2898#3015..3124#3414..4283#ggtttctttcacgcgcgctcgccaccgccctccttgctcgtccttccttccttgcatgacatgtccgcggccgcggtgctcgccgtcgtcgccgccgccgtcgcagcgctcgccgcggcggcgtcgggctacgagctgaccaagaacgggaccgtcatcacctacgaccgccggtcgctgatcatcgacggccaccgggagatcttcttctccggctccatccactacccgcggagcccgccggacacgtggcccgacctcatcagcaaggccaaggagggcggcctcaacgtcatcgagagctacgtcttctggaacggccatgagcccgagcagggcgtcgtcagtacctcatcccctcctcacacattgctcaatttgcatttgatttcatccatctaattaaatcgtgtctaaatgaatggctgtttaatttgtttctaagtacaattttgaagggaggtatgatttgatcaagttcttcaagctgatccaggagaaggagatgtacgccattgtcaggatcgggcccttcgtgcaggctgaatggaaccatgggtttgtttgtgtggcttcaccatctcattcagacatgcatgcgtgttcatctctgcattttgcaactcctgtttatatttttgcctcttcttcttcttgttgttgtttttcttcagaggtctgccatattggctccgggagatccctgacattatcttccggacgaacaatgagcctttcaaggtgacaaatctgacaacatcatgatccaattttcttacgcagtatgactgagacaactaattgctccagtttctgaaaacttgtttggtgattgtccgaaatactggccaggtgtatttgaaatgcaggaatgttctaatatgatgattatctccttttttttgaacttcatgtatgcagaagtacatgaagcagtttgtcactctcatagtgaacaagctcaaggaagcaaagctcttcgcatcacaaggaggccccatcattctggcacaggttcatctttcaaattgatccctttcttcctgtttcttagaatctggcaatgtgctaaggaataatgacattctgaatgctgatggtgattcttggttacatgatcataacagattgagaatgagtaccagcacctggaggtggcattcaaagaggctggcaccaagtacatcaactgggcagctaagatggccatcgcaaccaacactggtgtcccgtggatcatgtgcaagcagactaaagctcctggtgaagtggtaacttcattaagatcatacatacattttatagcaagtgcaagtattctcgatggaataaaaacttgatactagactgttcatggccaaagaacaaaagtattacttaatttgttcaaacttttggattgacagtacctttcatgttcaggatttaccacgatttagccattaaatctgaattttattttatccaacagatccctacctgcaatgggaggcactgtggagatacttggccgggtccagctgacaagaagaagcccctcttgtggactgaaaactggactgctcagtaagttactacttactactacttgagtaaaatccaattcatcttgttctgtaagatcattgtcaatgttgtcagtgagagaaaaaaatatatactacttatgcagacttcttagtgattaacatgttctattcctttctggggggtggttcttgatctctacaggtacagagttttcggtgatccaccgtcccaacgttctgcggaggacattgccttctccgtggcgcgcttcttctccgttggcggcacaatggcaaactactacatggtagtactgaacagcaacagtaacctgttcttgacaaagaagagagatgaaatttctgacagaactgacactggtggctttacttgtgtgaataatcaacagtaccatggaggaaccaactttggaaggaacggcgccgcgttcgtgatgccgagatactacgacgaggcccccctcgacgaattcggtatgcaaccctgaacaatccatccacagtacccaagaaatgtgtgtaagatgaagcaccatgagttgtgaagaattcagtttctaacacgcaatgagcaggcctgtacaaggagcctaaatggggccatctcagggacctgcaccacgctctccgtcactgcaagaaggccctcctctggggcaacccctccgttcagcccctcggcaaactctacgaggtaatgccatggcaatggcagtgacggcaagaggaagaagacgtaggacgccattgttgatgatgatgatgatgatgatgatgtgtttccatggtgcaatgcaatgcaggctcgggtgttcgagatgaaggagaagaacgtgtgcgtggcgttcctgtcgaaccacaacaccaaggaggacgggacggtgacgttcagggggcagaagtacttcgtggcgcggcggtcgatcagcatcctcgccgactgcaagacggtggtgttcagcacgcagcacgtcaactcgcagcacaaccagcgcaccttccacttcgccgaccagacggtgcaggacaacgtgtgggagatgtacagtgaggagaagatcccccgctacagcaagacctccatccgcacacagaggccactcgagcagtacaaccagaccaaggacaagaccgactacctctggtacaccaccaggtacgtaggtagtagtcgttgtctttctggatggctctgataccatattgagatttataatacggtcgtctgtttgtctcagcttccggctggagacggacgacctgccgtaccggaaggaggtcaagccggtgctggaggtgagcagccatggacacgccatcgtggcgtttgtcaatgacgctttcgtaggtaactaacttggatgctttcttccatcttcctcttgttgttccattgttgttgttgttgttgctgctgcttgattccatccaccgtgtgcgtttggatgaattgaaatattgcagggtgcgggcacgggacgaagatcaacaaggcgttcacgatggagaaggcgatggatctcaaagtgggcgtcaaccacgtcgccatcctctcctccacgctgggtctcatggtaataaagctttcatccacccaccattttgatgattgttgttcttcttaggatggagcttggtggtgatatgatcagggttttaaatcttccgctatatctgtttgataagagttccagctatttgctctcatgtacaatttagccactatagccctatttagcccaatatagttatcgctatagttgtctgagaaactaatcgctaaatgttttaacccgctatttaaaacattggatatgatgggcaacaacaaccatggtggttgttttttttttgttatttcaggacagtgggtcatacctggagcaccggatggccggggtgtacacggtgacgatccgggggctgaacacggggacgctggacctgacgacgaacgggtgggggcacgtggtggggctcgacggcgagcggcggcgggtgcactcggagcaagggatgggcgcggtggcgtggaagcccgggaaggacaaccagccgctgacgtggtaccggcggcggttcgacccgccgtcggggaccgacccggtggtgatcgacctcacccccatggggaagggcttcctcttcgtcaacggcgagggcctcggccgctactgggtctcctaccaccacgccctcggcaagccgtcgcagtacctctaccacgtcccgaggtcgctgctccgccccaagggcaacacgctcatgttcttcgaggaggaagggggcaagcccgacgccatcatgatcctgacggtgaagcgggacaacatctgcaccttcatgacggagaagaacccggcgcacgtccggtggtcgtgggagagcaaggacagccaacccaaggcggtggccggcgccggcgccggcgccggcggcctcaagccgacggcggtgctgtcgtgcccgaccaagaagaccatccagtccgtggtgttcgccagctacggcaacccgctcggcatctgcggcaactacaccgtcggcagctgccacgcgccgcgcaccaaggaggtggtcgagaaggcctgcatcggccggaagacctgctccctcgtcgtctccagcgaggtctacggcggcgacgtccactgccccggcaccaccggcacgctcgccgtccaggccaagtgctccaagaggcctcctcgttccgccgccaccgcgcaataagctagccagccgccacatctctcttcttgtctctcatcagattctcagatagttaaagctttgacctgctgctgctgccgccgctgctattgtactttgattggttccatccatcatcgatctcactcacttcactggggaattatttaggcaaacaatcaattcatgctcagctccttgtatgcaccatcgtccatggttttatatgtaggtaactgtagattgattaattgttgatgcaaataaatactagtccattccatttggtg</dnaseqindica> |
| External Link(s) |
