Difference between revisions of "Os08g0566000"

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(Created page with "{{JaponicaGene| GeneName = Os08g0566000| Description = TENA/THI-4 protein domain containing protein| Version = NM_001069074.1 GI:115477886 GeneID:4346355| Length = 3745 bp...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0566000|
 
GeneName = Os08g0566000|

Revision as of 20:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0566000

Description

TENA/THI-4 protein domain containing protein

Version

NM_001069074.1 GI:115477886 GeneID:4346355

Length

3745 bp

Definition

Oryza sativa Japonica Group Os08g0566000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28436012..28439756

Sequence Coding Region

28436379..28436803,28437174..28437443,28437562..28437973,28438087..28438374,28439080..28439188
,28439275..28439600

Expression

GEO Profiles:Os08g0566000

Genome Context

<gbrowseImage1> name=NC_008401:28436012..28439756 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28436012..28439756 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcggcctcctccgccgtgtctacctccgcctcccccctttccctcctgccacctctctttattattggtcaagaacaagacctgcagctgcagggcccaaccaccccatccctaggcgcatgtcgacgtcctctactgccgcggcggtcgttgccgagggctccgccgctcgccgcttctggatcgccgccgcctcgagggaggccgccttcgccgcctacacgcccttcctcgtctccctcgccgccggggccctccgcctggattccttccgccaatacatcgcccaggatgcctacttcctccacgccttcgcccgcgcctatgagatggccgaggagtgcgccgatgacgacgacgacaaggccaccatcgtcgtcctcaggaaggccatcctccgcgagctcaacctccacgcttccgtccttcaggaatggggagtcgatcccaacaaagaaatccctccaatcccagccacaactaagtacactgatttcttacttgcaacttccactggaaaggttgatggtgggaaaggttctgataaaatggtcacaccattcgagaagacgaaaattgctgcatacactgttggggctatgaccccatgcatgaggctttatgcgtatctgggcaaagaacttgcagttttcttgaaacaggatgaaaatcacccatacaagaaatggattgagacttatgcatccagtgattttgagaataacgcactccaaatagaagagttgcttgataaactaagtgtctctctaactggcgaggagcttgagattattgggaagctctaccagcaagctatgaggctggaagttgagttcttctctgctcagccagtagaccaacctgttgtagctccactctcaagatattgtggtccgaaagataagctcttgatattttgtgattttgatttgacatgcactgttgttgattcatctgccattttggcggagattgcaatcttgtcacaccaaaaggctagtcaaggtggggctgatagttcccttgatcgtacaaaatcagcggacttgagaaattcatggaacatgctctcaaatcaatacatggaagagtatgagcaatgcatagcaagcttgcttcctccagaagaagcaaggtcactagactatgatcaactgtataaaggtttggaggtgctatcgcagtttgagaaacttgcaaactctagggtggttgattctggtgtcctgaggggaatgaatttagatgacatccgaaaagctggagagaggcttattctgcaagatggatgcaaaattttttttcaaaagattggcaaaacaagggagaacctcaatttagatgtccatattctttcctattgctggtgcgcagatcttataaggtcagctttttcatcagttggttgtctagacgggctgaacatacattcaaatgagtttgcttttgagggatctgtttcaactggtcatattaacagacaaatggagtctcctctggacaaagctgaaaagttcaagagcatcaaaagcgacgtgggtagtacagggacattattgtcagtctatattggggactcggttggagatttgctttgcttgttggaggcagatattggtattgttgttggatcaagcacaaccttgcggagagtgggcaaacagtttggtgtttcatttgttcctctgttcactgggttggtagagaagcagaggcgaatagaaaaggaagaatcatccatcttcaaggcacggtctggaattctttatacggtttctagctggtcggaggtacaggctttcatcctgggaaatgatttcagctga</cdnaseq>

Protein Sequence

<aaseq>MRGLLRRVYLRLPPFPPATSLYYWSRTRPAAAGPNHPIPRRMST SSTAAAVVAEGSAARRFWIAAASREAAFAAYTPFLVSLAAGALRLDSFRQYIAQDAYF LHAFARAYEMAEECADDDDDKATIVVLRKAILRELNLHASVLQEWGVDPNKEIPPIPA TTKYTDFLLATSTGKVDGGKGSDKMVTPFEKTKIAAYTVGAMTPCMRLYAYLGKELAV FLKQDENHPYKKWIETYASSDFENNALQIEELLDKLSVSLTGEELEIIGKLYQQAMRL EVEFFSAQPVDQPVVAPLSRYCGPKDKLLIFCDFDLTCTVVDSSAILAEIAILSHQKA SQGGADSSLDRTKSADLRNSWNMLSNQYMEEYEQCIASLLPPEEARSLDYDQLYKGLE VLSQFEKLANSRVVDSGVLRGMNLDDIRKAGERLILQDGCKIFFQKIGKTRENLNLDV HILSYCWCADLIRSAFSSVGCLDGLNIHSNEFAFEGSVSTGHINRQMESPLDKAEKFK SIKSDVGSTGTLLSVYIGDSVGDLLCLLEADIGIVVGSSTTLRRVGKQFGVSFVPLFT GLVEKQRRIEKEESSIFKARSGILYTVSSWSEVQAFILGNDFS</aaseq>

Gene Sequence

<dnaseqindica>2954..3378#2314..2583#1784..2195#1383..1670#569..677#157..482#gttgggttgggttgggttgggttgggtccgtccgatgaatgtgaagaaatccaagactgacgagacgacagggccggtgcggtgcgacggcggtcggcttcggcttcttcgtttccatcgccggcggcggcgcctccttcccttcccttcccttctatgcgcggcctcctccgccgtgtctacctccgcctcccccctttccctcctgccacctctctttattattggtcaagaacaagacctgcagctgcagggcccaaccaccccatccctaggcgcatgtcgacgtcctctactgccgcggcggtcgttgccgagggctccgccgctcgccgcttctggatcgccgccgcctcgagggaggccgccttcgccgcctacacgcccttcctcgtctccctcgccgccggggccctccgcctggattccttccgccaatacatcgcccaggatgcctacttcctccacgccttcgcccgcgcgtacctacttctccctctctcttacagtaccaaacatcgagattccgatttccatggatctgattgattaattttgattggagcagctatgagatggccgaggagtgcgccgatgacgacgacgacaaggccaccatcgtcgtcctcaggaaggccatcctccgcgagctcaacctccacgcttccgtccttcaggtccctcctactcttattccccattctcccatcatctatctattcttcgggatccccccaccaaccacaacccctgcctcatttcatttcgacttgcttccttctagttttacacctctgcaagctttgtgcaaaccacctagccgatctaacttgattactgcatacaatacatactatggtggatacaacacatgcatttctagccgcttacactgctaattctagcttgttcataccatacagtccatactacatcatcaaccttatggcatccacataccaagtacaattgcctcttcctatgtactactgcttttgatttcaaaaccaaaaaaaaaaacttcaggcatgcattttagcattgcgatatgcatgtttcatctatatttccggctctagttaactaaatcatccgtgaagatctcaaatatgcaaaatatacaattccttgccacgagtacacctcagaatcatacatccacaactaaagtgctaccaagtgcattgccatttcaatcggggacttgtggctcctagagatgaatcacaagttcgctacatgccgcacgatgaaatctgcatgtatgtagtcttttgtctgtggcataaaccaaatagcctttttccttccaactagccaatttccttttactccgattttctcatcactcatatcagttgccttaactatataatttgcaggaatggggagtcgatcccaacaaagaaatccctccaatcccagccacaactaagtacactgatttcttacttgcaacttccactggaaaggttgatggtgggaaaggttctgataaaatggtcacaccattcgagaagacgaaaattgctgcatacactgttggggctatgaccccatgcatgaggctttatgcgtatctgggcaaagaacttgcagttttcttgaaacaggatgaaaatcacccatacaagaaatggattgagacttatgcatccagtgattttgaggtatggaatcggaaggccgtgtctttttatatttaattattgatcctactggcttttgctttggtgcagctggttcatgcgctgaaattctctccgtttcctcttttaaacagaataacgcactccaaatagaagagttgcttgataaactaagtgtctctctaactggcgaggagcttgagattattgggaagctctaccagcaagctatgaggctggaagttgagttcttctctgctcagccagtagaccaacctgttgtagctccactctcaagatattgtggtccgaaagataagctcttgatattttgtgattttgatttgacatgcactgttgttgattcatctgccattttggcggagattgcaatcttgtcacaccaaaaggctagtcaaggtggggctgatagttcccttgatcgtacaaaatcagcggacttgagaaattcatggaacatgctctcaaatcaatacatggaagagtatgagcaatgcatagcaagcttgcttcctccagaagaaggtaaattaaatcatctccccttgtttctgctgaaaatttgtgatttaccaactatacataaatcaatcttgcaaagaccctgctgatgatttaggtaatttgttttgtttaattccagcaaggtcactagactatgatcaactgtataaaggtttggaggtgctatcgcagtttgagaaacttgcaaactctagggtggttgattctggtgtcctgaggggaatgaatttagatgacatccgaaaagctggagagaggcttattctgcaagatggatgcaaaattttttttcaaaagattggcaaaacaagggagaacctcaatttagatgtccatattctttcctattgctggtgcgcagatcttataaggtcagctttttcatcaggtaggactaaaaacccttggtcagtcattctttcttttctgatgatgttagctgctgctaagcttattttgctagcctgtgctacttataggcttatgactaacatctcagtattgttattgctagaattgttttagtagatatcttttactttctttttttgaaacaacccacacaagatagtgcggctatcacaatgacccttgtgagttgtgaccaactatcatttagagttcggagcttggtcggttatgtttaccatgatatgatttgatcaccattgcatcaactgtattttggtgattagtacattaaaactggagtcgtgaactgataataactatttgtgtcttgtgatgattgtgcacagttggttgtctagacgggctgaacatacattcaaatgagtttgcttttgagggatctgtttcaactggtcatattaacagacaaatggagtctcctctggacaaagctgaaaagttcaagagcatcaaaagcgacgtgggtagtacagggacattattgtcagtctatattggggactcggttggagatttgctttgcttgttggaggcagatattggtattgttgttggatcaagcacaaccttgcggagagtgggcaaacagtttggtgtttcatttgttcctctgttcactgggttggtagagaagcagaggcgaatagaaaaggaagaatcatccatcttcaaggcacggtctggaattctttatacggtttctagctggtcggaggtacaggctttcatcctgggaaatgatttcagctgattgctggtggccttgtgaatcgttttccttggcaaacaagtgtacaagactggtgccaattgatggacttgatacgagtaaaactcgatgtggccattttattaaagccgcatgcgtgccgactctcttcctgtacgaatgaattgaataccttgtgttgtgcgatggttttgtatgatcaatgtgtcattgattacacaatcgatggaccccttttcattcgggggtcatttcatatatatatttttactttaatttccggagtgtttcctggcattgcaacatagtgatgcacccgagtgtaactgtagagatggtgtttgtagcaataaaaagttgattgctggagtggtcatccatattatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0566000, RefSeq:Os08g0566000