Difference between revisions of "Os08g0567000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0567000| Description = Conserved hypothetical protein| Version = NM_001069080.1 GI:115477898 GeneID:4346361| Length = 5066 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0567000|
 
GeneName = Os08g0567000|

Revision as of 20:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0567000

Description

Conserved hypothetical protein

Version

NM_001069080.1 GI:115477898 GeneID:4346361

Length

5066 bp

Definition

Oryza sativa Japonica Group Os08g0567000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28481990..28487055

Sequence Coding Region

28482194..28482289,28482367..28482432,28482601..28482696,28482781..28482856,28482938..28483024
,28483131..28483219,28483288..28483380,28485636..28485773,28485956..28486061
,28486447..28486643,28486768..28486836

Expression

GEO Profiles:Os08g0567000

Genome Context

<gbrowseImage1> name=NC_008401:28481990..28487055 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28481990..28487055 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccatggctcgccatctccctgctattcttcttctctcgtcggcgctgctcctcgcccttgcctccgcctccgcttccgctgctgctccggcgctggccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaacaccacgaccaggccgcttcaatgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgcaccaccaccctcgctacctgcacaatcttcttcaaagttagacaagctgttactccctaacccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatgcctccgttgaaagcatcacatctgaagctggtagcatcttcaaaaccactattgatggtctaagcgattctgctacagggcttacagataaggatgatctagttattgttcattcagatgaatctccagctgttgattcaggttctgagtattttgatagtgatctcactgacttggcaaactggcttggtgggtcctatgagaaggttgatggcaaattgatcattcccttggagagtggagaaagtcttactttgcttattacaaaggaagcagacatggaatttgcatccagcttgatctcccttcgtaaaactataaaaaggggtattcaggttcatgaagatttctcaggaggtgtcatgagccctgcagagttattagtatgccacttcaaaggcattaaggctttggaagaagaatatggttccacagaaattgttaagcagggaactgatgtagtccggacagctgtcaccaaagcatttgatttactacgtggagcatataatggaaaaattgttgggttagtaatatccacaaaggaggcttcaccatccttagtgggtccagcatcttcactgcacatttcgagatggctaaaagagacaagccaaactaacactacaatagcctcttctgagatacttgttagaaagagtttggcatggattacagggatcattcttcttgtctctactctcattggggtttgcttgcttatgaatatgccacttaccagggacaccctcctgtattcgaatgtgaagatcgattag</cdnaseq>

Protein Sequence

<aaseq>MAAMARHLPAILLLSSALLLALASASASAAAPALAAFVDAASRR YLRDQQHHDQAASMSLDQVSAAVSVLLGFAPPPSLPAQSSSKLDKLLLPNPFDRPRAV FLLQIDGFHASVESITSEAGSIFKTTIDGLSDSATGLTDKDDLVIVHSDESPAVDSGS EYFDSDLTDLANWLGGSYEKVDGKLIIPLESGESLTLLITKEADMEFASSLISLRKTI KRGIQVHEDFSGGVMSPAELLVCHFKGIKALEEEYGSTEIVKQGTDVVRTAVTKAFDL LRGAYNGKIVGLVISTKEASPSLVGPASSLHISRWLKETSQTNTTIASSEILVRKSLA WITGIILLVSTLIGVCLLMNMPLTRDTLLYSNVKID</aaseq>

Gene Sequence

<dnaseqindica>205..300#378..443#612..707#792..867#949..1035#1142..1230#1299..1391#3647..3784#3967..4072#4458..4654#4779..4847#ggtcgcgtcgcgtcctctcctgatccccttttccttcgcccgtttgacatccgcagaaaagaaaagggaaatcctccgatcgaaatcatcgaaccgtctcttctacatcgatcgaaaagagaagaggagcggcggcgagatccaattccaatcgatccttgtgctgctgctgctgctgcgctcgacgatcccatccggatctcgatggcggccatggctcgccatctccctgctattcttcttctctcgtcggcgctgctcctcgcccttgcctccgcctccgcttccgctgctgctccggtaaaatctagtttcaaagtcttcctagtccctgctcttcctcctctaacatgtatgtattccctgtacgtacgcaggcgctggccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaacaccacgaccaggtgataggtcccatccccaatcctctctattcctgctactctagtttcttagctgctgctcgatcgataattcctatgagttatttactttatgagtttggcggcacaatcaattcaattactctatgtgaaatctcccgttcatcatgttctatcactctgcaacaggccgcttcaatgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgcaccaccaccctcgctacctgcacaatcttcttcaaaggtacttcaaccttccataccctttctttacatgtctcctgccaccctacttaaccccttcatcaacttttcttacccctgtcagttagacaagctgttactccctaacccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatggtatgtctgttttgtttcatttcattatttgcacctattcatttagtgcctctattgatgtatctcttcaccatatgtcagcctccgttgaaagcatcacatctgaagctggtagcatcttcaaaaccactattgatggtctaagcgattctgctacagggcttacaggtttcacgaaatatctggcaacttcttatcttggaagcgcgcacatctatacttttttggaacatgccattttgttattgtaattcatttatcacatgccttgcagataaggatgatctagttattgttcattcagatgaatctccagctgttgattcaggttctgagtattttgatagtgatctcactgacttggtaagttcgtctttctttagggaggaagtggcattatgcatagcatttatggcgaacaaattttgcaggcaaactggcttggtgggtcctatgagaaggttgatggcaaattgatcattcccttggagagtggagaaagtcttactttgcttattacaaaggtcagcaccgttttatccattgcacaaatacacaaaataggttctctttgttcatttgcacatctatgcatcttggatgcatgtgttttctttttttatgtcgcatacaacagtcctcaaaagaaggcaaaatttctctgctgattattactacactatcctcaaaacatgccagtaaactagcacttgattattactacactatcctctctgctgattcatgtaaatgacaaccatttcccctcttgaatgtatttcttttatgttaaaggcaaaatttgttacagtgtcatgacccgaggccatgacgcgataactactgccgagaggatagcggacggcattctctcctggagaagtgatgtagatttagattggggagaagaacattaggggaatagattagactaattgatattcatcgcttaactcgagataatccatcctttatatagagatgatatgactcggcccttataagaaactaactcaaactaactctatctaatcttatcctatctctgaaccaactgatacagtactcgtggtactgttcatccgctaggacttgggctcgtgggccttggcctctcagcccaatgcccatgacactacacccctctttttgagcagctcgtcctggagctgcaatgtggttctcctgacttaaacaaaacctaaaacaactaaaatccaaaccttttacatcttggctggatttgttattataaactgaaaacaaatctaataacattatggaatgactggtcgtgatggcatcatcaaaccttggtgggccccatccaaaagctgtcaaacaaaggaggatttcatgccttgtcccaagcttggaagcataattaatctgatttgaataggagctaggaaatagccttgaccagctcaaatgcacatgacggctgtaagatccttcttcctcaaactcagcccagtgtggataaagtttcttcccaggaaaaggccaatgcaacttctcaccgttggcattgccccccacgccgccaagcagttcactgcgtgcgtagcttcctgcacttgcgaaaacgacgcgcactccgtgccaacaaatcgcgagaattgcagtgcaactaactcaaactaagtctatctaatcttatcctatctcctaaccaactgctacagtacccgtggtactgttcatcctctaggacttgagcttgtgggcctcggcctcccaggcccaatgcccatgacatacaggacattcggaagtttgtggtatttgctgccagacacctaaaaaacgtgacacggctgtaggacaccccaaaaacttggtaatttgctgggggacaccgccgctgttattttatcatttacgagccaaatgaagggagaaaccatgtgaaaaggcgattttgacccttgggacagcaggttgtaacacaacttggtgtggttcaaaccaaacccaggacacattccctcccctaaacctataaaattggtggcagcaggaacggcgttgatggtggcggccattataagctgttgccacaagggcaacctcatctgttgtaaatgtttctcgcgccatttggcttggaaatgataaaataatatccgctgtgtccctcagtaaattaccaggtttttggtgtgtcctatggtcgtgtcacatttttggggtgtacagtagcaaagatggcaaactacgagtatcatgtagcaaattttgcctatgttaaaattggattaggtggtattgtaatttattactcttttttgtcggttgagattgctcaccgtgcctcagaacaataatttattacttgaagtgggctgtaatagtgtgtatcaattcactcgaaaactataagaacttaatttgaatattttttggtgataaatataaaacttgcatgtaaatttaagtgtggtactcttaccctaccatgacgttatttatttcctcttgctcatgtattatctgttaatgtcaaccagtatgctttctcatcctttcgaaacatgtactacttgaactatttcctctaataacactttctcttcttcatctcccctaaatacttgtggacaatcagaataagaattatttcatctaataacactttctctctactttatcttccctaaatacttgtgcacgatcaaaacaatccttatataaataactgagggagtacatgaccgcatttgcatttatgacatctcaaggcccaaatttcattataacttgcatttctttacaggaagcagacatggaatttgcatccagcttgatctcccttcgtaaaactataaaaaggggtattcaggttcatgaagatttctcaggaggtgtcatgagccctgcagagttattagtatgccacttcaaaggcattaaggtaaattgtaaacatatttttttagctagcagtttgaagatataactgatttctacaaacgtgtactaataaccttgacacctttccacctaaatcctacctatctgaacccttttatccttggtccatcaaatgattctacggtagcatgattaacttgttaatttgacgggttcatgtaggctttggaagaagaatatggttccacagaaattgttaagcagggaactgatgtagtccggacagctgtcaccaaagcatttgatttactacgtggagcatataatggtaaagttgacaaaaatttcttcagttctgttatgcatgcgtacatgcattatcccttgaagtttgttcaagttaaattctcctgcggtactcaggaacaaaggaaaaaagtgttctcatttgttcttatttggagggatggactaagagctgtaacattagctagctgcttaaagttatatttggttatgtttatgttttggaattgtccatagagaagtggatattggcccctcctcactggcaaatcagttgaacaatctagacctgcctccgtctctctctgaaggattattgtattgtagttgttacttttgctattatataatctttacatttgcagagctttggctttggttttaacagcttcgatgttctgatacaggaaaaattgttgggttagtaatatccacaaaggaggcttcaccatccttagtgggtccagcatcttcactgcacatttcgagatggctaaaagagacaagccaaactaacactacaatagcctcttctgagatacttgttagaaagagtttggcatggattacagggatcattcttcttgtctctactctcattggggtgagcataattcatcaaagtttcactaattattaaatggataataattttgagcagcgccgtacagtttgtagtttatccttgtgattaaatatttctgaagactggtgtgctgattgtgcaggtttgcttgcttatgaatatgccacttaccagggacaccctcctgtattcgaatgtgaagatcgattagatggaattaggagggagggagagagattagcacattgatggttgtaatttccattttcacacgctgcgtggcctttatgggatggttttgacctttttgtaggccatatatgtttgacataaaaattgtgcttctgtgtgggtcagcccggccggaatgcaaaaccttgtttgtgaattgtcactgcctgtacggggcccttgttttttggttataaat</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0567000, RefSeq:Os08g0567000