Difference between revisions of "Os09g0454100"

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(Created page with "{{JaponicaGene| GeneName = Os09g0454100| Description = Rhomboid-like protein family protein| Version = NM_001069884.1 GI:115479510 GeneID:4347244| Length = 2481 bp| Defin...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0454100|
 
GeneName = Os09g0454100|

Revision as of 21:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0454100

Description

Rhomboid-like protein family protein

Version

NM_001069884.1 GI:115479510 GeneID:4347244

Length

2481 bp

Definition

Oryza sativa Japonica Group Os09g0454100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17713575..17716055

Sequence Coding Region

17713593..17713799,17714069..17714325,17714423..17714477,17714558..17714638,17714719..17714815
,17714922..17714989,17715150..17715248,17715370..17715411,17715486..17715629

Expression

GEO Profiles:Os09g0454100

Genome Context

<gbrowseImage1> name=NC_008402:17713575..17716055 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17713575..17716055 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtcgtcgccgccgtggctgctgctcccctccttcccctggcctcccccgccccctcccggctcctcctccggccgcggcggcggaggaggcggcggcggggaccccggcgactggaagccgaacgtcgtcgcggcgttcgccggcgcccaactcggccgcgccctccgccgtcgcctcgccggcctcctccgctcgccggaggcgcgacatcttggtgccttgccgagaataggtgacatttggtttgaaggatcagactcattcgccacacactcgattcttggagtgttggagaatgcgctctccgcaccatatgcttgcagctctgttttgttcaatggaaatggatcggacaggaggtacatcggtagggggaagttgccatccagaaggccaagtggaatcaattcgaagaagaggctttggactaatattcttcttgctgttaatattctggcttatgtcgctcagataactacacaaggacgattacttatatggggggctaagatcaacagtatgattgatagaggagaactctggcgtctggctacatcatctcttcttcatgcaaatcttgctcatcttgctttcaactgtttttctttaaattcaattggacctatggtggaaatgcttactggtcctagaagatatcttgccgtgtatttcacttcggctctggcaggttcattaatgagttatcgctattgtgcgtctcctgcggttggtgcgtcaggggccatttttggattggttggtgcctatgctgtttatacgtggaggcataggagatttttggggcatggaaaggaaagtttagagcatattggacgcgttgttatcttgaatatgggtatgggtctccttacaaggggcattgataactggggccatttgggaggcttgctcggaggcatggctatggcatggttcctcggtccagcttggcaatatcaatatgtgtcaaaggacggaagagcggtgttcaaagacaatgcccctattctccaactaagcaacgggaaatggttgaggtag</cdnaseq>

Protein Sequence

<aaseq>MASSSPPWLLLPSFPWPPPPPPGSSSGRGGGGGGGGDPGDWKPN VVAAFAGAQLGRALRRRLAGLLRSPEARHLGALPRIGDIWFEGSDSFATHSILGVLEN ALSAPYACSSVLFNGNGSDRRYIGRGKLPSRRPSGINSKKRLWTNILLAVNILAYVAQ ITTQGRLLIWGAKINSMIDRGELWRLATSSLLHANLAHLAFNCFSLNSIGPMVEMLTG PRRYLAVYFTSALAGSLMSYRYCASPAVGASGAIFGLVGAYAVYTWRHRRFLGHGKES LEHIGRVVILNMGMGLLTRGIDNWGHLGGLLGGMAMAWFLGPAWQYQYVSKDGRAVFK DNAPILQLSNGKWLR</aaseq>

Gene Sequence

<dnaseqindica>19..225#495..751#849..903#984..1064#1145..1241#1348..1415#1576..1674#1796..1837#1912..2055#tcgcaggcggtggggcccatggcgtcgtcgtcgccgccgtggctgctgctcccctccttcccctggcctcccccgccccctcccggctcctcctccggccgcggcggcggaggaggcggcggcggggaccccggcgactggaagccgaacgtcgtcgcggcgttcgccggcgcccaactcggccgcgccctccgccgtcgcctcgccggcctcctccgctcgccggtgctgcttcttacccctgcccgctgtttcactccgattttgggatgtagactcttgggtttccaccgttgcgatatccagcccatccgcagctattaaccgatttcagactcttggtgatatgctagttttattagctgtgatattatcatgatgtgttagtggtttgttaccgtagagcatttccactacttccgtttattaaatggatcgataaattgcgtgcttaatcacacaatttattctgaactgaattgcacgatgtgtaggaggcgcgacatcttggtgccttgccgagaataggtgacatttggtttgaaggatcagactcattcgccacacactcgattcttggagtgttggagaatgcgctctccgcaccatatgcttgcagctctgttttgttcaatggaaatggatcggacaggaggtacatcggtagggggaagttgccatccagaaggccaagtggaatcaattcgaagaagaggctttggactaatattcttcttgctgttaatattctgtaagtcattgctcaattcatgttattggttcctcctttgttgatagtaagcttccttctacatttgtggattaacattgttctactttcaccgaagggcttatgtcgctcagataactacacaaggacgattacttatatggggggctaaggttggtctgttggttttaattttcatttcattttattctgataacttttagtctaactcaattacaaaccatgattttagatcaacagtatgattgatagaggagaactctggcgtctggctacatcatctcttcttcatgcaaatcttgctcatcttgctgtatgtatttgtgtcagtttgtgtttataatctaagaaataacattgctaattttccttctgatcataataatgatgcagttcaactgtttttctttaaattcaattggacctatggtggaaatgcttactggtcctagaagatatcttgccgtgtatttcacttcggctctggcaggtattttgttattacctatgtttgagaacatatatatggtggtgataggtgaacattgcctgtcttcctttagttttgtcataatgaattcttcaaattttgccaggttcattaatgagttatcgctattgtgcgtctcctgcggttggtgcgtcaggggccatttttggattggtatggttacccttagcttttgatttcagtcatagaaataagtctaatcatattgttggcaacccaaaggaccataagagtttaaaactagtttcaagaaatccctggtatggtttcttatgtcacaccatttgcatgaactttatctgcacatgtccaggttggtgcctatgctgtttatacgtggaggcataggagatttttggggcatggaaaggaaagtttagagcatattggacgcgttgttatcttgaatatggtattgttctacttatctacctgactttgttcttgttaccagctttctatcgttttcattttagcacttcttttgtggttatcatctttaacaaattgcttaaactttgctgtgtaaatagggtatgggtctccttacaaggggcattgataactggggccatgtaagcctcctaatcttagttcaatgtatgaaatatttacgtaatgacctcacttgacacttgaataatggcagttgggaggcttgctcggaggcatggctatggcatggttcctcggtccagcttggcaatatcaatatgtgtcaaaggacggaagagcggtgttcaaagacaatgcccctattctccaactaagcaacgggaaatggttgaggtagaattttgtatttaaaacggattcctaacttgtgtgggacacagaaattgaagactgaagagaggtggggtttgacactgccattctgccaaggtgatggagtggacgcctagtttggactttggaaagctatttccagggaaactccagctccaaatcttacgcaagggcgacatttgagttcacctgagtcattatttttggatataagttgcaattgtctactgtgacagattatagctaatcaatactcaaatagtcaccacagcaattgtatttaacatgcttatcagtgttactggagcccaactggcacggtgtacatgaatccatatttctggagcccaactggcacggtgtacatgaatccatatttgatacagctaactataggctcaagtgtatcaatctatttatttttggggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0454100, RefSeq:Os09g0454100