Difference between revisions of "Os07g0194000"

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(Created page with "{{JaponicaGene| GeneName = Os07g0194000| Description = Similar to Vesicle-associated membrane protein 725 (AtVAMP725)| Version = NM_001065644.1 GI:115471020 GeneID:4342638|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0194000|
 
GeneName = Os07g0194000|

Revision as of 20:32, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0194000

Description

Similar to Vesicle-associated membrane protein 725 (AtVAMP725)

Version

NM_001065644.1 GI:115471020 GeneID:4342638

Length

3783 bp

Definition

Oryza sativa Japonica Group Os07g0194000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5127868..5131650

Sequence Coding Region

5128023..5128212,5129496..5129637,5129727..5129847,5129951..5130013,5131114..5131260

Expression

GEO Profiles:Os07g0194000

Genome Context

<gbrowseImage1> name=NC_008400:5127868..5131650 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5127868..5131650 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcagcagtcgctgatctacgcgttcgtggcgaggggcacggtggtgctcgccgagtacacggagttcaccggcaacttcaccaccatcgcggcgcagtgcctccagaagctccccgcgagcaacaacaagttcacctacaactgcgacggccacaccttcaactacctcgtcgaggacggattcacatactgtgtagttgctgttgaatcagttgggcgacaaatccccattgctttccttgacagagtcaaggaagatttcaccaaaagatatggtggtgggaaagcagctactgctgcagcaaacagcctcaaccgagaattcggatcaaaacttaaggagcacatgcagtattgtgtggaccaccctgaggaaatcagcaagcttgcaaaggtcaaagcacaagtctcagaggtcaaaggagttatgatggaaaacattgagaaggttcttgaccgtggtgagaagattgaactgcttgtcgacaagactgaaaacctgagatctcaggcacaagatttcagacagcagggtacaaaggtgcggcgaaagatgtggttacaaaacatgaagatcaagctgatcgtcctgggcatcatcatcgcgctcatcctcatcatcatcctgtccgtgtgccatggcttcaagtgcaagtga</cdnaseq>

Protein Sequence

<aaseq>MGQQSLIYAFVARGTVVLAEYTEFTGNFTTIAAQCLQKLPASNN KFTYNCDGHTFNYLVEDGFTYCVVAVESVGRQIPIAFLDRVKEDFTKRYGGGKAATAA ANSLNREFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIE LLVDKTENLRSQAQDFRQQGTKVRRKMWLQNMKIKLIVLGIIIALILIIILSVCHGFK CK</aaseq>

Gene Sequence

<dnaseqindica>156..345#1629..1770#1860..1980#2084..2146#3247..3393#ctcatccccttttcccttctcctccaccccccccccccaaccacctcaccgccgacgacctcatcctcgtcggcgccgtcggattcaccagcgagggaggttgcggcggcggcggagagcgcgagggaggaaagcgggggaggtgaccgccagcgatggggcagcagtcgctgatctacgcgttcgtggcgaggggcacggtggtgctcgccgagtacacggagttcaccggcaacttcaccaccatcgcggcgcagtgcctccagaagctccccgcgagcaacaacaagttcacctacaactgcgacggccacaccttcaactacctcgtcgaggacggattcagtgagttcctcctcctcctcctcgatccaatgatcgatcggtctccctcctcggcgaggccgcgcggacgccgatctgcctcggatccgcaacgttgcgtgctcgatttggggttctccatgcgtgtagatctcgcggggtttgttcgatctgtttcggtaggcctggggcctcgagtggttggatccgcttggactccgagctgacttgcggggcgtgctagtgctatctagcgtgtgctgcttgtgcttcggtttgagttgacgaatgctagagagggaggctaggtgttgggaattggctatatttagaggaggctcgggtgtttccatgtgtgattgcatgctagaatcaggaaatttatagacgtgtttgcgttttgaatgtgttatttgactatatcaaatattttttaggctctaaccgcatcggcatactggggattcagggattaggtgattggtgcgtttttcgattttgcatttctggacgattcatggacatatctaactaacttatcaaatcaaaatggtgtgatacttatctttcatattctactttgtgatgatcagaagaggcattaaaattgtgtcattcttgcgggcacaagtattgtatcggggcagtctagcatattttgccttttcttatgttcaaactgggtgaccatatttccattattatggtaatgtgaaaatgacatcaaaaggctacttcaaatttcatttggtacttcattgaataggttgcagtatattattatggaataaatgctgtttagttttaggtaggatgcaagttcccaatccaattgtttgcattgtttttgaacaaataaacaattaaggcaagacatggtttcatagtgcaagaggaattggatgtggggctaacattacgtagtcaagggaagattcataactgttatcttgtattaggctgtggcgtgcatgattgagtaattagtggaaggttatgaaggataacaaaaaaagcaggaagatgggtggttagaaagtttttttttcccccacaggcaaactgttaaggtagcacccacccttttatggtaaattgaatatgttacacaatttaaacagtctaaattggtttgcaaacttgcgtcatctattttttggaaccattctaaattgcttggtcaccctaaaacaactattttcattattttgatcttttggtactttgatgttttcactttctaacacaaactcatgatgtgcattgagattaattatcatttccatttccccccctttgtgcagcatactgtgtagttgctgttgaatcagttgggcgacaaatccccattgctttccttgacagagtcaaggaagatttcaccaaaagatatggtggtgggaaagcagctactgctgcagcaaacagcctcaaccgagaattcgggtatgttcattttgcttttatgtgatattcgagcatggtgtgggctttctttcttttgactgatatttgtttgtctctactatttaaagatcaaaacttaaggagcacatgcagtattgtgtggaccaccctgaggaaatcagcaagcttgcaaaggtcaaagcacaagtctcagaggtcaaaggagttatgatggaaaacattgagaaggttcattcttaaatcatccaatggtctgcacattatgttctttaaaaaccatgatgctcttcaaaggttgttgctgattctatattacaattatgaaattcaggttcttgaccgtggtgagaagattgaactgcttgtcgacaagactgaaaacctgagatctcaggtattaacgttttccttcatgatgtgctgtactagtttctttatctttgaagttactgttgtgtaacacagagaatttagaactgcaaatcatcttatagaactcaggaatctttatacaatggattgctatggagaaattactgatacatgttagtgtagatcgcatgagagtatggagtatggtaatggtatgttctagaatttagtgcattataataaaaacattctgaataagatttaagtaggacaaatctagtctcttttactcaatgcatccaaagcattgttactagaattttgatggctttgttagttgaagcatcattgttagtagggaagggatggtttcattaattgaaacatcaatattactggacttctatggtagttgaaatgttatcatctctagaataatttttcagaatttttggaacatatatgccaagatacaagattgccctaaagaacaagatatctcgtggtctgttttagcctatgtatttctgttttgagctgactagaaagcttccatgtcgatgctggtgtacatatgtagaagtaccgcattatggttccaaaggtgatctggcttactgttgatatggtatagcattattactgtgctgcgactgacatgtagtaatcctccacaccatctgctgttataactgatgtgcacccggctaggcagaaggaaattatgaactattttaactcattaattaactcagcaacttttgatgtataatacattattactatgctacaacaagcatatagattccttcttaccatctattatactgttcaagctgaataatttgatgcacaatgagatgcttgtagtggttggagatgcttgtaatgatatgcaactatctgagctttgcttatttagctcctatgagcgatgggaagtagcagctgttgaaattaactggattaaacagtgtgagacacaatatagatgctttggatgatactgttaaagaaaaccaatgaatggtggcacttatggattatgcactttattctgtcttggcattttggaaatgcacatagctttcttcgttcttaaatcaaaactatgggttgcaggcacaagatttcagacagcagggtacaaaggtgcggcgaaagatgtggttacaaaacatgaagatcaagctgatcgtcctgggcatcatcatcgcgctcatcctcatcatcatcctgtccgtgtgccatggcttcaagtgcaagtgagggtgttggcttcccagtcctccacattcaccttgccccccataataccgcctattcctggcgaaaaaaaagaccatatgtttttttttgttctgttagtcatgagtcctgccccgattcttgggtgttcgagtgtccctgatgtcgcgcttgattggtgtcggatagtgactgggtttatgggtcggagtcccgtgtatttttggacgctattcatgtatagcctgtatgctaccctcttttcgctctgctatatgagtagtaggtgttactacgtttgttcccccactttatatcttctcttactccacagctaaatcttagtaagaaggaacaacttgcattttcaaacctgtgatcttcataaataattttgattttggagagatt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0194000, RefSeq:Os07g0194000