Difference between revisions of "Os07g0204900"
(Created page with "{{JaponicaGene|
GeneName = Os07g0204900|
Description = Similar to Zeta-carotene desaturase (Fragment)|
Version = NM_001065680.1 GI:115471092 GeneID:4342680|
Length = 5500 ...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os07g0204900| | GeneName = Os07g0204900| | ||
Revision as of 20:32, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os07g0204900 |
|---|---|
| Description |
Similar to Zeta-carotene desaturase (Fragment) |
| Version |
NM_001065680.1 GI:115471092 GeneID:4342680 |
| Length |
5500 bp |
| Definition |
Oryza sativa Japonica Group Os07g0204900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:5677782..5683281 |
| Sequence Coding Region |
5677933..5678098,5678436..5678560,5678666..5678800,5679128..5679200,5679581..5679654 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:5677782..5683281 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:5677782..5683281 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccatggctgccacgtcccgcgcgccgtccacgctggccccggcgtcgttctccgccgccggcggcagcaggaggcggcgccggtgcccgaatcccagggtgcgggtgggggtgggggtgcggtgctcgctcgacagcaacgtctccgacatggccgtcaacgctccgaaaggattgttcccgccggagccggagcactacagggggccgaagctgaaggtggccatcataggggccggcctcgccggcatgtccaccgcggtggagctcttggaccagggccatgaggttgatctgtacgagtcccggccgtttatcggcggcaaagtcggttcttttgtggataggaaagggaaccatatcgagatggggctgcacgtgttcttcgggtgttacagcaatcttttccgccttatgaagaaggttggagctgataataatctgctagtgaaggagcatacccatacatttgtaaataaaggaggcacgattggtgaacttgattttcggtttcctgtgggagctccgttacatggtatccaagcattcctacgaactaaccaactcaaggtttatgataaagcaagaaatgccgttgctcttgctctaagcccagttgttcgagctcttgttgatccagatggtgcattgcagcaagtacgggatttggatgatgtaagtttcagcgattggttcttgtcgaaaggtggtactcgagagagcatcacaaggatgtgggatcctgttgcctatgctcttggtttcattgactgtgataatatcagtgcacgttgcatgcttaccattttcactctgtttgccacaaaaacagaggcatctttattacgcatgctaaagggttcacctgatgtttatctgagtggtccaataaagaagtacataacagacaggggtggtaggtttcacctgaggtggggatgtagggaggttctctatgataagtcacctgatggggaaacctatgttaaaggccttctcctatccaaggctacaagtagagagataatcaaagcagatgcatatgtcgcagcttgtgatgtcccggggatcaaaagacttttaccttctgaatggaggcaatgggatacatttgacaacatctacaagttagatggtgttcctgtagtcacagtacagcttcgttataatggatgggttacagaacttcaagatttggagaaatcaagacaactgaaaaaggcagttggcttggataatcttctctacactccagatgcagatttttcatgtttttcagaccttgcactttcatctcctgctgactactacattgaaggacaaggttccttgatccaagctgtgctaacccctggcgatccttacatgccattgccgaatgaggagataattagcaaggttcaaaagcaggtcttagaattgttcccgtcatcacaaggcttggaacttacatggtcgagtgtggtgaaaatcggtcaatcattgtaccgcgagtcaccaggaaatgatccatttagacctgatcaaaagacaccagttaaaaacttcttcctgtctggctcttacacaaaacaggactacattgacagcatggaaggggcaactctctcaggcaggagaaccgcggcctacatctgtggtgcaggagaggagctgctcgccctccgaaagaagctcattgtcgacgacagcgagaaggccaggggtaaggtcgaggcccttcagacaagctga</cdnaseq> |
| Protein Sequence |
<aaseq>MAMAATSRAPSTLAPASFSAAGGSRRRRRCPNPRVRVGVGVRCS LDSNVSDMAVNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDLYE SRPFIGGKVGSFVDRKGNHIEMGLHVFFGCYSNLFRLMKKVGADNNLLVKEHTHTFVN KGGTIGELDFRFPVGAPLHGIQAFLRTNQLKVYDKARNAVALALSPVVRALVDPDGAL QQVRDLDDVSFSDWFLSKGGTRESITRMWDPVAYALGFIDCDNISARCMLTIFTLFAT KTEASLLRMLKGSPDVYLSGPIKKYITDRGGRFHLRWGCREVLYDKSPDGETYVKGLL LSKATSREIIKADAYVAACDVPGIKRLLPSEWRQWDTFDNIYKLDGVPVVTVQLRYNG WVTELQDLEKSRQLKKAVGLDNLLYTPDADFSCFSDLALSSPADYYIEGQGSLIQAVL TPGDPYMPLPNEEIISKVQKQVLELFPSSQGLELTWSSVVKIGQSLYRESPGNDPFRP DQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRRTAAYICGAGEELLALRKKLIVDDSE KARGKVEALQTS</aaseq> |
| Gene Sequence |
<dnaseqindica>152..317#655..779#885..1019#1347..1419#1800..1873#2511..2615#2856..3100#3184..3271#3421..3463#3538..3694#3867..3995#4231..4303#4500..4664#4870..5028#acggaggccgacaaatccgctgctcgacggcatcttcgcctcctcccccacccgcatcctcttccacctctcgcgctcacgccatttatactctcctcctcctcctcctcctctactcctagcagcagcgttggttggtgagctgaggcatatggccatggctgccacgtcccgcgcgccgtccacgctggccccggcgtcgttctccgccgccggcggcagcaggaggcggcgccggtgcccgaatcccagggtgcgggtgggggtgggggtgcggtgctcgctcgacagcaacgtctccgacatggccgtcaacggtgagggtttcttgggtttcgttttctccggtcgattctttcttctgcggtgccactccgctctccccctagagattcttgaacggttttggtatatggatagaaccaaggagacacaaattcttgaaccctggattttggtggctctgaactgaactgaatttgtggattagttagttagttagttgttgcttgtgatgagtctgaccatgtgtagtagctagattcttcttttctaggttcattcagtagctttctacaggattacctgaatatgctgctgactgtgaaaggctgaaagcaattgaattggggatcttttttccgtgtgtggcagctccgaaaggattgttcccgccggagccggagcactacagggggccgaagctgaaggtggccatcataggggccggcctcgccggcatgtccaccgcggtggagctcttggaccagggccatgaggtttcttcaattcattgcctgcaatgatgtccgtgttctgctcttccagggaaaagacagtgatttttggtttaccaaaattggggtgatgttcctcttttgcaggttgatctgtacgagtcccggccgtttatcggcggcaaagtcggttcttttgtggataggaaagggaaccatatcgagatggggctgcacgtgttcttcgggtgttacagcaatcttttccgccttatgaagaaggtaattttctatgttctttcagatggttggagaatgtctacttttcaagtattttgttaatctagactgcactaagtagataatggagctgagttagatgcttcttccatcatgaaaagttaggaatgccatctgtttgcacttactagagtatggtaaatctgtactcccggagtatattgtgaggagaacatgctatctttatttttgtctatatgaagcatgtagtcaattactttatttcatgagtcggataatttgtactttttctgtattagccaggtttgacactaactgttaatcgagttcaaccttattttgtttcaggttggagctgataataatctgctagtgaaggagcatacccatacatttgtaaataaaggaggcacgattggtggtatgttcagttatcctatacccatgtgcctaacagttgtaggagttgtggtgtttttttacttgtcgtgctgaaatcattcttcattacttttgagctacctttcatagaaagttaaaccgttgctaatatttaaagtttacaaagtgtaaattactatgagacgatttgctagaacactaattgttcttttgtgggcggcaaaaaaaaagtgctctggcgtgttattttcttgatcttgcattaggccaatactgataagacaacttgccatatttctactaagtgtgctaaactaactcaagtgtattttgctatgtatttatattccacttattttctaaactttcatactatttgctttgctaattgctatacagaacttgattttcggtttcctgtgggagctccgttacatggtatccaagcattcctacgaactaaccaactcaaggtaattactctaaattcatgtccggtaactaggatatcaaactttgactatctttattgaccatgtttaatcacaatattttgactttccaacttattgtaatattcttgctttgaactctgtcaaagtcatgcccacgcttctaacagtatcctcatttttatactctgtattcataccttttagtcacacgccattactttttgaatatagtgcttggcgctttggggcacaatgtaatcagctgagttgagtgtaaatattccttgaaagctcctaaaagtgattggtctgtttaatattccttgcagactgtgataatctactaaagatgtggctttctgtgatatttgtattgtcatgaatcaaagcattgtaatgtcttcctacctgtctatatatgcaaattgcatagctagttcttgattgccatgtcaccagatagaatgtgatatggattcttctaaatcttgttataattcataattgaaagattctataagggtgataagcatatttgttaaggattctataaggattcataaaccttcaactttgcccatctattttatacagtacatatttgttagatggattcaatatatggactaattaaaatatttgaatcatgtttcaggtttatgataaagcaagaaatgccgttgctcttgctctaagcccagttgttcgagctcttgttgatccagatggtgcattgcagcaagtacgggatttggatgatgtatgtatctctctcctcttatttaagtgtcattaggagtgtatatctactgtctaggcaatgcatcattatatctcgaatctggaacataggttactagtgcacttccttctgtttcattctcatcacaattagttatataaacatatgcactataaatatcgtagaactgttattaatgaaaaatcagaggtagatagcttctatctaaaggttaatttgcaagtgtacttttttcaggtaagtttcagcgattggttcttgtcgaaaggtggtactcgagagagcatcacaaggatgtgggatcctgttgcctatgctcttggtttcattgactgtgataatatcagtgcacgttgcatgcttaccattttcactctgtttgccacaaaaacagaggcatctttattacgcatgctaaagggttcacctgatgtttatctgagtggtccaataaagaagtacataacagacaggggtggtaggtatgatggcaaagaccgaaatttgttttgcattagtatgtactgcaccgttgaaagcttacatcatttaacaaatccttcaggtttcacctgaggtggggatgtagggaggttctctatgataagtcacctgatggggaaacctatgttaaaggccttctcctatccaaggttagcaccattatctatgaagtgtggttatcctttgcatgactgtacagctagattatggttgataataatgtgcattgctgtaggcttagcttaacccttttcttgatactttaattgacacttttgccatgcctggacatttttaggctacaagtagagagataatcaaagcagatgcatatgtcgcaggttctttctcttccattttgtctttgactaccacgtcctaccatgcaagattaaattggaattgttgattgtagcttgtgatgtcccggggatcaaaagacttttaccttctgaatggaggcaatgggatacatttgacaacatctacaagttagatggtgttcctgtagtcacagtacagcttcgttataatggatgggttacagaacttcaagatttggagaaatcaaggtaactccagtctcccctccccagttagcccaatatttttatcaatgcccgtgatgcacacattatattttttcataaagagtgcatttgtttgtactgaacaatggccgtacaaatgcagtctgcttttttgcatgatgctgaatgatacctctgtttatctttgatgtagacaactgaaaaaggcagttggcttggataatcttctctacactccagatgcagatttttcatgtttttcagaccttgcactttcatctcctgctgactactacattgaaggacaaggttccttgatccagtaaggctactttctcttccatgttctttgcttttgtggtctggaattaagtttgaccattcagtgttcttgacatttgatatcattcactattgtagctgttagtttgtaattatggtttatttttacacaagcagcttacttggtgactagtgtagtagaactgttgaatttcatgcatcaaattgataactgttgcaattaaaatcaccgtgtgctactacttcatttgtagagctgtgctaacccctggcgatccttacatgccattgccgaatgaggagataattagcaaggttcaaaagcaggtgggtttgtaaataccactctgttgatcaaattattcttgtattccattaccaaaattctagaactggttgttagagatccattgcaaataatgaagcgtgttaattttaaatcaggataatttcttctgcttttgttaattatttcattctttcaaaactcacttcagtgcaaatccatttatgattcatgcaggtcttagaattgttcccgtcatcacaaggcttggaacttacatggtcgagtgtggtgaaaatcggtcaatcattgtaccgcgagtcaccaggaaatgatccatttagacctgatcaaaagacaccagttaaaaacttcttcctgtctggctcttacacaaaacaggtatctaaaccattgacttagtcactgtcaccagtaatcaatcagcgctcatcaaatacaattgttttgattctgtaaatttagattttaagcaggaaggttcgtttggtagatattcgtaatattggatgaaacatatataactgctcctgtaaaagcatgatcgacgatcccatgaactcataatctgctatcttgtttgcaggactacattgacagcatggaaggggcaactctctcaggcaggagaaccgcggcctacatctgtggtgcaggagaggagctgctcgccctccgaaagaagctcattgtcgacgacagcgagaaggccaggggtaaggtcgaggcccttcagacaagctgagcttcctcaaatgacacatgctggagtgagtggattgctatgcccaaaacaaaaacagcttcctgggtgtagtaggcgatttccgcagcgactctcatgtaaatcctacttgattgagcatttaggtccaatctgctgctgccctttttgccttgacacgatcgttcgttcgcccgtcaatggtgtgttcttcgttattgtgaatttgtgattgggaaccaaaggtggcatacgggattacatcaggcagcgtgtgttttgttcagcttaaccgatcattgaacccattgatgatgatgatgatgtttatatagtgcacacatcacttaaaatcttgtgagagatggtgcttaaatttggtgagtactgctgtactttataaggcagctttagagtttttataaggagtatattttgaacattgtgagatgagaaattttagatacttaaaagtacgagttacttaaatttt</dnaseqindica> 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