Difference between revisions of "Os07g0212400"

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(Created page with "{{JaponicaGene| GeneName = Os07g0212400| Description = Conserved hypothetical protein| Version = NM_001065714.1 GI:115471160 GeneID:4342716| Length = 5580 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0212400|
 
GeneName = Os07g0212400|

Revision as of 20:33, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0212400

Description

Conserved hypothetical protein

Version

NM_001065714.1 GI:115471160 GeneID:4342716

Length

5580 bp

Definition

Oryza sativa Japonica Group Os07g0212400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:6179122..6184701

Sequence Coding Region

6179367..6179387,6179797..6179844,6180014..6180079,6180189..6180248,6180411..6180476
,6180562..6180624,6180703..6180750,6180868..6180933,6181031..6181096
,6181230..6181295,6181510..6181575,6181663..6181746,6181839..6181907
,6181998..6182342,6182426..6182521,6182615..6182707,6182817..6183020
,6183117..6183385,6183492..6183753

Expression

GEO Profiles:Os07g0212400

Genome Context

<gbrowseImage1> name=NC_008400:6179122..6184701 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:6179122..6184701 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaggagtagaaaaaggcgtattgttcagagcaatgaggaatatttgtcagaggaacagactgaagaagaaaatacccttccacagcttgccacaccatctgaacaaaaaactgtatgtgatgattctggagaaggcaatgaagacactgatgacgattttaatatcaatgatggagaaggcaatgaagacactaatgacgatgttgatattgatgatgaaggcaatgaagatactgatgttgatattaatgttcgagttgaaaatggagcacctgaaacacgtggcaagacaaaactgaaagatgtttggaaccttccgaaagggcttagaattgtggtacaatgcaatgatctcaatcaggcggtaggggaagaagatggaattttgggtaaatttcttggaatgatatctaggaatggtagtctgtgtagcttaggctacacagactggagatatgtaataggaaagagagagaaaaatacaaatgaactaaaagttaaaaaggacatacttaagcaagtaaagatgagattcctttatgctcctcggatggaagagttcatattaaaaaaaattggagaaagatggcggcaatataaagcaaaactaaaagatttgtattttgatgtgaatgagactaaggaagctaattgcaacaatgtcccagaaggtgtgctttctgaccagtggattgctcttgtcaatcattggatgaacgagaaatcgaagagaataagtgagcagaataagaaaaactgccaaaagaagaaggcaattcacacagcagggacaaagagttttgctcgcacaagagaagagatgagacaaaaagatcctgcaaagaagaacccacatagagctgttgtttatgtccacacacacaagcgcaaaagtgacaagaatataaatgggcatgtggataatttgaagagacttatagctgaacaaccagctttagcggatgctagtaaaggaaagactgcttggaaaggagatgcattgaaccaaatactaggagatgacaagcctgggcgtgtgcatggtcttggactagttccaaagcctaaacaagtgcttgatgtgccaacttcccgacgtttgcagaatataaatcttactacagtggaggataactccagtgaagatgtaatggctattagactgcagatggaaaagttagaacgccatgttgagaataatgatgctgaacttttacaattaaaagagaaggcaaccaagttggaaaaggcacaaaagaatcagggaggtttagatggagcatctacaaataaaaaagctatttgtgatgacgtacctaattcaaaaaggaggagagtgtatggtgacaacccctcgcaagaaatttgtatgtttgaggagggaaacattatggatcagcaggacaacagtttgatgaatacacaaagccatgtgcacgatgagaatttgcaaccaccaaccaagcattctactgtttacaagcgcaaaggaaatttggaccataatgagcttatgcaaccagggaagagtatttctagtgcatacaagaacaataaacctgacaaccaggacaactatatggtgaatgcacacaaagttacaagtacacacaagaacaaagagaaccttacccgcaagcttgttagaccaagcctaaacaagtatagtactgcttctaagaaacggcaatgcaacacaatagactttttaactgacaattcaacagtgaaagtgtatggtgacggtcccttgcaagaaatttgtcatgttgaacaggaaaacattgtgatgaattcacaaagccatgctcaagatgaggataagacaccaccaaccaagcatgctactgcacacaagaacaaacgaacctttggcctaaatgaccatgggaaacagatggagattatttgtgccaagaacaagaaacctgacaatcaggacagccatatggtacatgcacataaagttggtggtgcatacaagaaacaacagtgcagcaaaatggactttatcactgacaattcaatggaggttgacaagataaatgggtga</cdnaseq>

Protein Sequence

<aaseq>MARSRKRRIVQSNEEYLSEEQTEEENTLPQLATPSEQKTVCDDS GEGNEDTDDDFNINDGEGNEDTNDDVDIDDEGNEDTDVDINVRVENGAPETRGKTKLK DVWNLPKGLRIVVQCNDLNQAVGEEDGILGKFLGMISRNGSLCSLGYTDWRYVIGKRE KNTNELKVKKDILKQVKMRFLYAPRMEEFILKKIGERWRQYKAKLKDLYFDVNETKEA NCNNVPEGVLSDQWIALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEM RQKDPAKKNPHRAVVYVHTHKRKSDKNINGHVDNLKRLIAEQPALADASKGKTAWKGD ALNQILGDDKPGRVHGLGLVPKPKQVLDVPTSRRLQNINLTTVEDNSSEDVMAIRLQM EKLERHVENNDAELLQLKEKATKLEKAQKNQGGLDGASTNKKAICDDVPNSKRRRVYG DNPSQEICMFEEGNIMDQQDNSLMNTQSHVHDENLQPPTKHSTVYKRKGNLDHNELMQ PGKSISSAYKNNKPDNQDNYMVNAHKVTSTHKNKENLTRKLVRPSLNKYSTASKKRQC NTIDFLTDNSTVKVYGDGPLQEICHVEQENIVMNSQSHAQDEDKTPPTKHATAHKNKR TFGLNDHGKQMEIICAKNKKPDNQDSHMVHAHKVGGAYKKQQCSKMDFITDNSMEVDK ING</aaseq>

Gene Sequence

<dnaseqindica>5315..5335#4858..4905#4623..4688#4454..4513#4226..4291#4078..4140#3952..3999#3769..3834#3606..3671#3407..3472#3127..3192#2956..3039#2795..2863#2360..2704#2181..2276#1995..2087#1682..1885#1317..1585#949..1210#aaaaatctctttcctctatcctgactccctgagtaaatctctttcctctgttgtgggattcccctttcctacgaactctcctgtcgttctacggttctcctcctcgtcttcatcggtgttgatctgtaggtaagatgccgggcgctttactgacccaccgccccaagcaggcgctcctagatcttccaccgctccgctccgtcggctgctgtaccagccatcactgctgccgcaccttcctgccgattaacagccacgagcaggcgacccccatgccccatggatgatgtagggcatgcggcgggccggagacgcccccagccgatgtgccgggtgaccggggcactgcaattgatgcgggttatacctcccgacaccggctgtccacttcgctctgctccacgctgcgcggctggcggcaatgtttccaagccccggaatctctgcctccctctgcacatcttactacctctctgagtcgccaaattgcaatggaggctaattcccttccaggactacaatacttaccaatttgatatgttgtattttcaggtttggagtcagatgcactgaccgtccatagctgaaggagcctggtctacgtacagctaggcttcacacaactgtaagcaataaatatgtgatctagttttaccttgcagccaattaaattttgttatttctacccattacttgtttcaaattgttggcctataaaatggacaaatgaattagtgagtatgacaaacagatccatattatagcattacttttgggacaacagtactctgttgttcttcaaaaacaaatccaaaatggctcagggtataatcaattctgaaattattctttttgaaactatgtacagcacagtcctacttctgaaatgagaatgatatactttcgatgccataaatgacagataggttttttttgggtgcaagagatatggcaaggagtagaaaaaggcgtattgttcagagcaatgaggaatatttgtcagaggaacagactgaagaagaaaatacccttccacagcttgccacaccatctgaacaaaaaactgtatgtgatgattctggagaaggcaatgaagacactgatgacgattttaatatcaatgatggagaaggcaatgaagacactaatgacgatgttgatattgatgatgaaggcaatgaagatactgatgttgatattaatgttcgaggtaactgctaagtttaatagtcctaatggtaacaaataatgacattattactcgtatccctgattactaaggatcacttttgtcttcgcaatttaacaccgaacagttgaaaatggagcacctgaaacacgtggcaagacaaaactgaaagatgtttggaaccttccgaaagggcttagaattgtggtacaatgcaatgatctcaatcaggcggtaggggaagaagatggaattttgggtaaatttcttggaatgatatctaggaatggtagtctgtgtagcttaggctacacagactggagatatgtaataggaaagagagagaaaaatacaaatgaactaaaagttaaaaaggacatacttaagcaagtaaaggtaattccttttcagatcaacatttttgctaacttcttgtattatgttatgcatatccccatatggccatatgagtttctgtgttgctatatgtagatgagattcctttatgctcctcggatggaagagttcatattaaaaaaaattggagaaagatggcggcaatataaagcaaaactaaaagatttgtattttgatgtgaatgagactaaggaagctaattgcaacaatgtcccagaaggtgtgctttctgaccagtggattgctcttgtcaatcattggatgaacgagaaatcgaaggtacatataccatattcatttctgtaatggtcttacaaattagaactctgtactaaacaaaacaatgcaatattcttttttgattgctaactctacgagaccataacagagaataagtgagcagaataagaaaaactgccaaaagaagaaggcaattcacacagcagggacaaagagttttgctcgcacaagagaagagatggtaaaacatgtcttgaatagtattcatctatttccatttcaagcatgtatagctactattaggactttactgatttggtcatgtgttccatagagacaaaaagatcctgcaaagaagaacccacatagagctgttgtttatgtccacacacacaagcgcaaaagtgacaagaatataaatgggcatgtggtatactattaacactcaaccatagatatttttcagttattctcatatgttgttttattcgtattaatttttcatatgtttaggataatttgaagagacttatagctgaacaaccagctttagcggatgctagtaaaggaaagactgcttggaaaggagatgcattgaaccaaatactaggagatgacaagcctgggcgtgtgcatggtcttggactagttccaaagcctaaacaagtgcttgatgtgccaacttcccgacgtttgcagaatataaatcttactacagtggaggataactccagtgaagatgtaatggctattagactgcagatggaaaagttagaacgccatgttgagaataatgatgctgaacttttacaattaaaagagaaggcaaccaagttggaaaaggcacaaaagaatcaggtgaatttaagggagttgagtcttaaaaaaattatatgaacttgtgtgtgacccaatgaatgcatctaacttacctaattgaagttacagggaggtttagatggagcatctacaaataaaaaagctatttgtgatgacgtacctaattcaaaaaggagggtatgtatctttatggaagaaatatcataacattttctgcattatctcataaactgtggtatagatctctgttcattttctgttatggacagagagtgtatggtgacaacccctcgcaagaaatttgtatgtttgaggagggaaacattatggatcagcaggacaacagtttgatggtaatgtgatatagcaccatcttataactgggaatagctgtgtttttttacttgggaatagcatttattttctctcttttacaatagaatacacaaagccatgtgcacgatgagaatttgcaaccaccaaccaagcattctactgtttacaaggtccttgcctttgcatttaaaatattattatatatatattcactattatttacatagcattcattataatcatatgccttcttttactctagaatacacagtctttgggccagaatcacagtgggaagcaaaggaagattacttcctgtgcaaacataaacaaataattggaacattatagtttgtgccaattttatgacctattccattgcagcgcaaaggaaatttggaccataatgagcttatgcaaccagggaagagtatttctagtgcatacaaggtgagttgattaagttctctctttatcctttcaaactcaatgccatagtcaataagtgtttgaaagtagtttaatttcgatatataaatgtatatatagatttgtaaaatttatttgttaccttccactgtagaacaataaacctgacaaccaggacaactatatggtgaatgcacacaaagttacaagtacacacaaggttattttttcatcactttaagtcaccatgtctacagatataagctctttgaaactataacacacatgatttactagttataataattgtattgcagaacaaagagaaccttacccgcaagcttgttagaccaagcctaaacaagtatagtactgcttctaaggttagtctaattgtttcaagttcaaaatgctatttctgtttattgaacactacacaacaactaaaatagcacacacagcatgttggtttttactgtaaattctctctattttttcagaaacggcaatgcaacacaatagactttttaactgacaattcaacagtggtaaaccttgctaacattttagtctaaatagtttaataaaatctggtcttaatgtccttttattttccactgtgatagaaagtgtatggtgacggtcccttgcaagaaatttgtcatgttgaacaggaaaacattgtgatggtaatatacataaatttcattgttttatacatgggaatagttgcactattttgtaactgggaatatatgctctctttgacaacagaattcacaaagccatgctcaagatgaggataagacaccaccaaccaagcatgctactgcacacaaggtccttgtctttcaatttatatttttattctgaactcaccatggttgcatcctattatatggttatcatggatacatagcattatattatttggtattgtttgtaactaactatgaatgtttactatagttcatgacaatgtgatgtattcttttattctagaacaaacgaacctttggcctaaatgaccatgggaaacagatggagattatttgtgccaaggttagttttcacttcttattgagttcaaaaattatttgatagaaaagtttgaaagtaaaatttcttaatatatataattttagcactaatttgttgccctcccctatagaacaagaaacctgacaatcaggacagccatatggtacatgcacataaagttggtggtgcatacaaggttgtttttttattcaccatgtttacaaatatcagtccattcaaactataacatgcatgattcactagtattatgattgaattggagaacaataattggctctgtttggtctttctttctttctatcttgtggttaaattgcaaaccatgatccaatttttttttatagaaacaacagtgcagcaaaatggactttatcactgacaattcaatggaggtattttactgtgaaattatttatgatacttgaatttcttaaagtatattgataatattgatggatgtattatgcacttcaggttggaactaaagtattcttaaaaagttggaaaaatcggaatacaaacgtggctcttgccactattgtaagctgtgatccaacacgcagagttggaggtgttgagctaggaaatgaatttttaatggttcatgtcgatcttgcattggcaaaatccgaagatttgattaggccatacaaaggctacaaaattgttggtcatgttgtaggacttgaaattgcgtggcctgcaatttttatatgttcctatctcttacttcttacttcggagatgtgcttttcgtcttcataatggtatattaatgcttatatattttttctattataggttgacaagataaatgggtgaagatgtgggggaaattttgtgactgctagtacgcaactaggtcacctgtacatgtcacggaatgatgatggctgcaaggtggagaatgggggcaacaagatgtgttttttttatatactttagattctattttctgcattaatgttctgaacaaaggtttaatgccatgaattatactgatgattgtctatgtaatgcaaaatactatatttaatatataatcgattatcatgattgattggact</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0212400, RefSeq:Os07g0212400