Difference between revisions of "BGIOSGA009474"
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[[Category:Indica Chromosome 3]] | [[Category:Indica Chromosome 3]] | ||
[[Category:Chromosome 3]] | [[Category:Chromosome 3]] | ||
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Revision as of 00:54, 24 October 2012
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA009474 |
|---|---|
| Description |
No apical meristem proteinPutative uncharacterized |
| Definition |
Oryza sativa Indica Group BGIOSGA009474, complete gene. |
| LocusTag |
OSJNBA0075M12.16 |
| Ensembl Transcript ID |
BGIOSGA009474-TA |
| Ensembl Protein ID |
BGIOSGA009474-PA |
| Length |
3199 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:39736297..39739495 |
| Sequence Coding Region |
39738731..39739495,39736297..39736683 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome03:39736297..39739495 source=RiceIndica03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome03:39736297..39739495 source=RiceIndica03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGACGACGACGAGATCGCTCTGGAGCCAGGCTACGCCTTCCGCCCTTCCGACGACGGCCTCATCACCCTCTTCCTCCGCCCCAAGATCGCCAAGATCCCCTTCGAGCACCGCCTCATCAACCACGCCGACGTCTACTCCGCCGATCCGGCGGAGCTCGTCGGCGAGCACAGACCGGCGCCGGGAACCCATGGGAGCGGCAGCGTCTGGTACTTCTTCTGCTCCCCGCGCTACACCAGCAAGCGCAAGGCCTCCGGGAGGCGGCAGCGCGCGGTCGGCGGCGAGAGCGTGTGGAAGTCGGAGGGCGGCAAGAAGGCCGTGATCGGCGCCGATGGCCGCCGCGTCGGGTACCTCCAGAAGTTCTCCTATGGCGTCTACGAGTCGTCGTCGTCGTCGGGGTCGGCACGCAGCTTCACGAGGCTTGGGTGGTGCATGACCGAGTACGGCCTCGACGACGACGCCACCGACGGAGCAGACAAGCAGGTGCTCTGCAAGGTCTACCGCTCGCCGCGCGCGGTCTGCGCGGAGGCGCGCACGGCGGCGGCAAAGTGCTCCGGCTCCAAGAGGAAGGCGGACGACGGCGTGGATCACCCGGAGGCGCCGCCGCCCAGCGCGCTGCCGCGGCAAGAGGAGGCCGGGAGCGAGCACGACGAGCAGTCATCGGAGCTCCTGCCGGAGNTTGGACCTGGACGCGCTGCTGTCGGCGCCGATGGACGAGAACCTGGAGAGCACGTTCAGCACGGCCGCCACGGAACAATACATGAGGGCTTTGAGCTTACTTGCGACACCACCAGCAAACCTTTGAAGCTCTTCTTGGGAAACACTATGACTCAGGTGATTAGCCTCTATCCTTCAGGAACTGTCCTTGCCTCTATCATGTACACTATCCCCATGATTCATGGAGTTGACACCTACAACTTGTCATGGGACTCTCCTGGGAGGAATCTCAACGTTGAGACCTACAATTACTTGGCGTTCCTCGGTTGTGGGATCGGGGTTTACCTGTTCCATCCAGATACTGGTAACCTTGTGGGTCATTGCACGATCAAGTGTGCCTCCATGGGGGAAATGCACATGGCAAACCGAAGGAGGGATTTGCAATGGCATGGGTTGCTGCACTGTCACATTCCCGGTGTTATTTCGAGGTTTTAG</cdnaseq> |
| Protein Sequence |
<aaseq>MDDDEIALEPGYAFRPSDDGLITLFLRPKIAKIPFEHRLINHADVYSADPAELVGEHRPAPGTHGSGSVWYFFCSPRYTSKRKASGRRQRAVGGESVWKSEGGKKAVIGADGRRVGYLQKFSYGVYESSSSSGSARSFTRLGWCMTEYGLDDDATDGADKQVLCKVYRSPRAVCAEARTAAAKCSGSKRKADDGVDHPEAPPPSALPRQEEAGSEHDEQSSELLPEXGPGRAAVGADGREPGEHVQHGRHGTIHEGFELTCDTTSKPLKLFLGNTMTQVISLYPSGTVLASIMYTIPMIHGVDTYNLSWDSPGRNLNVETYNYLAFLGCGIGVYLFHPDTGNLVGHCTIKCASMGEMHMANRRRDLQWHGLLHCHIPGVISRF</aaseq> |
| Gene Sequence |
<dnaseqindica>1..765#2813..3199#ATGGACGACGACGAGATCGCTCTGGAGCCAGGCTACGCCTTCCGCCCTTCCGACGACGGCCTCATCACCCTCTTCCTCCGCCCCAAGATCGCCAAGATCCCCTTCGAGCACCGCCTCATCAACCACGCCGACGTCTACTCCGCCGATCCGGCGGAGCTCGTCGGCGAGCACAGACCGGCGCCGGGAACCCATGGGAGCGGCAGCGTCTGGTACTTCTTCTGCTCCCCGCGCTACACCAGCAAGCGCAAGGCCTCCGGGAGGCGGCAGCGCGCGGTCGGCGGCGAGAGCGTGTGGAAGTCGGAGGGCGGCAAGAAGGCCGTGATCGGCGCCGATGGCCGCCGCGTCGGGTACCTCCAGAAGTTCTCCTATGGCGTCTACGAGTCGTCGTCGTCGTCGGGGTCGGCACGCAGCTTCACGAGGCTTGGGTGGTGCATGACCGAGTACGGCCTCGACGACGACGCCACCGACGGAGCAGACAAGCAGGTGCTCTGCAAGGTCTACCGCTCGCCGCGCGCGGTCTGCGCGGAGGCGCGCACGGCGGCGGCAAAGTGCTCCGGCTCCAAGAGGAAGGCGGACGACGGCGTGGATCACCCGGAGGCGCCGCCGCCCAGCGCGCTGCCGCGGCAAGAGGAGGCCGGGAGCGAGCACGACGAGCAGTCATCGGAGCTCCTGCCGGAGNTTGGACCTGGACGCGCTGCTGTCGGCGCCGATGGACGAGAACCTGGAGAGCACGTTCAGCACGGCCGCCACGGAACAATACATGAGGTATCTGTTGAACGACGAGCCTTTGCCGTGGGCTCCGACGACGGAGCTTGTCGACGGCGGCGGCGGCGGCGGAGACGAGTTCATCCAGACGGCGAACGGACCTTGCATGGATGGCGAGGTCTTCGCGCGCCTGGCTGCCGGAGAAACGCTCGACGACATTCTTGGCTCGACGAGTTCTTGATTGATCTCTATTGTCAGCGGCTGTTCCTCTAGCACTAGTAGTGTAGTTCTTTCGATCGAATCCGATCGAAGTAGGTTTAGTTAGAGAGATTCATGGATTAGGTATTTGTTTGATCCGTGAATAGACACTGAGCTGCATGAAGATATGCATTGCTCGATCGATCGATCTGTAATTTGATGAGAAGAGTTGAATTGATTCTTTCTGTAAAGCGTGATGATGTAGTGCCCTTTTGTGAAGTGAACTAATGAAATTCATCTTCATCAGAGGTTCGGAGTGTTTTTTTTTTCTTTTTGATCGAATTGAAGCAGAGGTTATGCATATGCGTTGCTTGTTTCCTCGATCGATCTGTAATTAATGAAGAGAGTTGAATCGATACTTTTCTGTAAAGTCTGATGTAATTCTCTTTTTTTGCTGCTGTAAGAAATTATAATACGAATGTTTTTCTTCGCTTCAGATGTCCTACATGCTCACATGCATTCACGCTGGCTTTCTCGGTGTTCATCATGATGAGCCCACCTTATATTGGGCCGTGTCGGCCCACCTAGATCCGTATCGGCCCTATTTTCGGTGATCCGGGTTCATGATGGGCCAATTCCGTAACGTGTAGTGGGCTCGTCTCACAGAAAGCCCTGTGACGGTGTGTACCTATCTCGCTCGTCGCCGTCGTTGGGTTCGCGAGACCGCGGCGGCGGCGGGCGGCGAGGGGCCGCCGGCGCCGAGGCATCCGCGACCGCGAGGCGGGGGATGGCGCGCGGCGACGACGGCGAGCGGCTGCCTGTCGCTGTTGGCGTGCTTCCATGGCAGCAGCAGCAGCAACAACAACCTACGGTTTCTGTTTCTCCCCCAAATTCCAAGGCATATCCTCTCCCTGATATTTGAGTTCGCCATCGTAGGAATTTCTTCAGTAGTTCAGTTCCAACCGAAGTGCTTGTCTTTTTTTTTTTAATCTCTAATTGTCTCATGTGCAATTGCATGGAAGAGGAACTAGGGAGAGTCTTGCTATGGAATTGGATGGTATTTTCCAGCGCTCTAGATGGATAGGCAACATGAATTTCCCTAGGATTTGGTTTACTGTGACCTCCGTACGGATATCCTTAAAACCAACTGTCCTTTTAGTTTTAGACCTTTTGTATGCTGATGTAGTGATGTGGTTCCATTGATCAACGCCTTCTTTTGCAAGTTAGTATGTTCATAAATCCACACAGCATGTACACACTAGACAGCTTTGATACTGCATTGACCAGAGTTGGATTTGGTAGTCGTTGTCACAATTGGGCATCAGATTCAAACAGATCTTCTACCTGCTCACACAGAGACTAACTCTTGTCTCATACTACAACAGAAGTCAAACATAACTTTAGTTGTACATGATGATGTGTTTCGTTCTGGTGGACTACAATATGTTCAACCAAAAAGAAAGGAAATTTGTCTCCACCACAAGTCTTACATGTCGTCAAGAGAGTGGCGAAGAGTCTTAAAAGCATCCCAAGATCATCTGCAAATTCCCCCATGGCTAGCCTTGGTTGACCCGGCAAGGTTACAGAAATTGTTTTCTTTTCCTTCTTTTAATGAATGGGAGAACTTCTGCTCTGGTCGATATTGGTTATCCACATTTCCATTCCTCTCAGAGGATGTATACTATATAATATTGGGTACCTTCTTGTTTCCCATCTTATGGGTTCAACAAAAGAAACTATAATATCTAGCATGCAGCTGGTTTTGCTATCGATCATAGCATCCACTGTCATGTTGGTGGCATCTGGAGCACCTCCTCCCACTGCTGCTAGTCTTGCTCCCTGCCCCAAAACATGTGGAGAAGTGAACATCTGGTATCCTTATGGTATCGGGCCTGGTTGCTTTCGGCAGGGCTTTGAGCTTACTTGCGACACCACCAGCAAACCTTTGAAGCTCTTCTTGGGAAACACTATGACTCAGGTGATTAGCCTCTATCCTTCAGGAACTGTCCTTGCCTCTATCATGTACACTATCCCCATGATTCATGGAGTTGACACCTACAACTTGTCATGGGACTCTCCTGGGAGGAATCTCAACGTTGAGACCTACAATTACTTGGCGTTCCTCGGTTGTGGGATCGGGGTTTACCTGTTCCATCCAGATACTGGTAACCTTGTGGGTCATTGCACGATCAAGTGTGCCTCCATGGGGGAAATGCACATGGCAAACCGAAGGAGGGATTTGCAATGGCATGGGTTGCTGCACTGTCACATTCCCGGTGTTATTTCGAGGTTTTAG</dnaseqindica> |
| External Link(s) |
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