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| Line 20: |
Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{IndicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Indica Group]][[Category:Indica Chromosome 3]] |
| − | GeneName = BGIOSGA009600|
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| − | Description = cDNA clone:J023059I02, full insert sequence|
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| − | Definition = Oryza sativa Indica Group BGIOSGA009600, complete gene.|
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| − | tag = |
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| − | tid = BGIOSGA009600-TA|
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| − | pid = BGIOSGA009600-PA|
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| − | Length = 5189|
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| − | Source = Oryza sativa Indica Group
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| − | | |
| − | ORGANISM Oryza sativa Indica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Indica Chromosome 3|Chromosome 3]]|
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| − | AP = Chromosome 3:38147686..38152874|
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| − | CDS = 38152863..38152874,38152543..38152729,38151960..38152210,38151758..38151857,38151493..38151679<br>,38150931..38151197,38150492..38150837,38150266..38150403,38150058..38150183<br>,38149760..38149972,38149345..38149600,38148947..38149149,38148353..38148703<br>,38147686..38148270|
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| − | GCID = <gbrowseImage1>
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| − | name=IndicaChromosome03:38147686..38152874
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| − | source=RiceIndica03
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=IndicaChromosome03:38147686..38152874
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| − | source=RiceIndica03
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>ATGGACGGTGCGAAATCGGGGAAGCAATGCCATGTCTGCCAGATCTGCGGCGACGGCGTGGGCACGGCGGCGGACGGCGAGCTCTTCACCGCCTGCGACGTCTGCGGGTTCCCGGTGTGCCGGCCATGCTACGAGTACGAGCGCAAGGACGGCAGCCAGGCGTGCCCGCAGTGCAAGACCAAGTACAAGCGCCACAAGGGGAGCCCGCCGATACTTGGGGATGAAAGCGATGATGTTGATGCGGATGATGCTAGTGATGTGAACTATCCAACATCCGGCAACCAGGACCATAAGCACAAGATTGCCGAGAGGATGCTCACCTGGCGCATGAACTCTGGGAGGAATGATGATATTGTCCATTCTAAGTATGATAGTGGTGAGATTGGTCATCCCAAGTATGACAGTGGTGAAATCCCTCGCATATATATCCCATCGCTCACTCACAGCCAGATCTCAGGTGAAATTCCTGGAGCGTCCCCTGATCATATGATGTCTCCCGTTGGGAACATTGGCAGACGTGGGCATCCATTTCCCTATGTGAACCATTCACCAAACCCATCAAGGGAGTTTTCTGGTAGCCTTGGCAATGTTGCATGGAAAGAGAGAGTAGATGGCTGGAAAATGAAGGATAAAGGTGCAATTCCCATGGCTAATGGTACTAGCATTGCTCCTTCAGAAGGTCGTGGGGTTGGTGACATTGATGCATCTACTGACTATAACATGGAGGACGCCTTACTGAATGATGAAACACGCCAACCTCTATCGAGAAAAGTGCCAATTTCGTCATCCAGAATAAATCCGTACAGGATGGTTATTGTGCTCCGATTGATTGTCCTATGTATATTCTTGCACTACCGTATCACAAATCCTGTGCGTAATGCATACCCGCTATGGTTGCTCTCTGTCATATGTGAGATTTGGTTTGCTCTATCCTGGATTCTGGATCAGTTCCCCAAGTGGTCCCCAATCAACCGTGAAACTTACCTGGATAGGCTGGCTTTAAGGTATGACCGGGAAGGTGAACCATCTCAATTGGCTCCTGTTGACATTTTTGTCAGTACTGTGGATCCTATGAAAGAACCTCCTCTTGTCACTGCCAATACTGTGCTCTCCATCCTTGCTGTGGATTACCCTGTTGATAAGGTATCTTGCTATGTGTCTGATGATGGAGCTGCAATGTTAACATTTGATGCGCTTGCTGAGACTTCAGAATTTGCTAGAAAATGGGTACCGTTCTGTAAAAAGTACAGCATAGAACCCAGAGCTCCAGAGTGGTACTTTGCACAGAAAATTGATTACTTGAAAGACAAAGTTCAGGCTTCTTTTGTTAAAGATCGTCGTGCCATGAAGAGGGAATATGAAGAATTTAAAGTTCGTGTTAATGCTCTCGTCGCCAAGGCACAGAAAGTTCCTGAGGAAGGATGGATTATGCAAGATGGCACACCTTGGCCTGGTAACAATACCAGAGACCATCCTGGAATGATTCAGGTTTTCCTTGGTCATAGTGGAGGCCTTGATACCGAAGGCAATGAGCTTCCTCGTTTAGTCTATGTGTCTCGTGAGAAACGTCCTGGATTCCAACACCATAAAAAGGCTGGTGCTATGAATGCACTTGTTCGTGTATCAGCTGTCCTTACTAATGGACAATACTTGTTGAATCTTGACTGTGATCACTACATCAACAATAGCAAAGCTCTCCGAGAGGCTATGTGCTTCCTTATGGATCCAAACCTAGGAAGGCGTGTCTGTTATGTCCAATTCCCTCAGAGGTTTGACGGTATCGATAGAAATGATCGATATGCAAACAGGAACACCGTGTTTTTCGATATTAATTTGAGAGGTCTCGATGGTCTCCAAGGACCAGTTTATGTGGGAACCGGTTGTGTGTTCAACAGAACAGCTCTTTATGGTTATGAACCCCCCATTAAGCAGAAGAGGCCAGGTTACTTCTCTTCGCTTTGTGGGGGACGAAAGAAGACAAAAAAGTCGAAGGAGAAGAGCACGGAAAAGAAAAAGTCACACAAACATGTGGACAGTTCTGTGCCAGTTTTTAATCTTGAAGATATAGAGGAAGGGATTGAAGGTTCTGGATTTGATGATGAGAAATCACTACTGATGTCTCAAATGAGCTTAGAGAAAAGATTTGGTCAATCTAGTGTTTTTGTAGCCTCCACTCTGATGGAATATGGTGGTGTTCCTCAATCCGCAACTCCAGAATCTCTTCTGAAAGAGGCCATACATGTTATCAGCTGTGGCTATGAAGACAAAAGTGACTGGGGAACTGAGATTGGATGGATCTATGGTTCTGTTACAGAAGATATTCTCACTGGATTCAAGATGCATGCACGTGGCTGGCGGTCAATCTACTGCATGCCTAAGCGACCAGCATTCAAGGGGTCTGCCCCAATTAATCTTTCGGATCGTCTGAACCAGGTGCTTCGGTGGGCTCTTGGTTCTGTGGAAATTCTTTTTAGCAGGCATTGTCCCATATGGTATGGGTACGGAGGACGGCTTAAGTTCCTGGAGAGATTTGCTTACATCAACACCACTATTTATCCACTCACATCGATTCCACTCCTCTTGTACTGCATATTGCCAGCTATCTGTCTTCTCACTGGGAAGTTCATCATACCAGAGATTAGCAACTTTGCGAGTATTTGGTTTATCTCTCTCTTTCTGTCAATCTTTGCTACTGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGCATCGATGAATGGTGGAGGAATGAGCAGTTTTGGGTTATTGGAGGTATTTCCGCTCATCTATTTGCGGTCTTCCAGGGTCTGCTGAAGGTGCTTGCTGGAATTGATACCAGCTTCACTGTCACCTCAAAGGCCTCTGATGAAGAAGGCGATTTCGCTGAGCTCTACATGTTCAAGTGGACAACCCTTCTGATCCCACCGACCACTATTTTGATCATCAACCTGGTCGGTGTTGTTGCTGGTATCTCCTACGCTATCAACAGTGGCTACCAGTCATGGGGTCCGCTCTTTGGGAAGCTCTTCTTTGCCTTCTGGGTGATTGTCCACCTGTACCCCTTCCTTAAGGGTCTCATGGGTCGGCAGAACCGTACACCGACCATTGTTGTTGTTTGGGCCATCCTCCTTGCATCGATCTTCTCCTTGCTGTGGGTTCGTATCGATCCATTCACCACCCGTGTCACAGGCCCTGATACCCAAAAATGTGGTATCAACTGCTAG</cdnaseq>|
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| − | AA = <aaseq>MDGAKSGKQCHVCQICGDGVGTAADGELFTACDVCGFPVCRPCYEYERKDGSQACPQCKTKYKRHKGSPPILGDESDDVDADDASDVNYPTSGNQDHKHKIAERMLTWRMNSGRNDDIVHSKYDSGEIGHPKYDSGEIPRIYIPSLTHSQISGEIPGASPDHMMSPVGNIGRRGHPFPYVNHSPNPSREFSGSLGNVAWKERVDGWKMKDKGAIPMANGTSIAPSEGRGVGDIDASTDYNMEDALLNDETRQPLSRKVPISSSRINPYRMVIVLRLIVLCIFLHYRITNPVRNAYPLWLLSVICEIWFALSWILDQFPKWSPINRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVQASFVKDRRAMKREYEEFKVRVNALVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGQYLLNLDCDHYINNSKALREAMCFLMDPNLGRRVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYGYEPPIKQKRPGYFSSLCGGRKKTKKSKEKSTEKKKSHKHVDSSVPVFNLEDIEEGIEGSGFDDEKSLLMSQMSLEKRFGQSSVFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQKCGINC</aaseq>|
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| − | DNA = <dnaseqindica>1..12#146..332#665..915#1018..1117#1196..1382#1678..1944#2038..2383#2472..2609#2692..2817#2903..3115#3275..3530#3726..3928#4172..4522#4605..5189#ATGGACGGTGCGGTGAGTCGCATTTTCGGGGGGAAAGATTCAAAGATTGGTTAATTTGTTGCGTGGATGTTTGGGTTGGTCTGAGCTCTGAAGCTTTTGCCTTTGTTTGTTTGTTTCGTTTGGTGTTGTTGTATGCGCGGCGAAGAAATCGGGGAAGCAATGCCATGTCTGCCAGATCTGCGGCGACGGCGTGGGCACGGCGGCGGACGGCGAGCTCTTCACCGCCTGCGACGTCTGCGGGTTCCCGGTGTGCCGGCCATGCTACGAGTACGAGCGCAAGGACGGCAGCCAGGCGTGCCCGCAGTGCAAGACCAAGTACAAGCGCCACAAGGGTATAAGTTGCACATTATCCATTCATCCTTCTCTTGGATTTCACCTAAATACTTCATCTTTGGTTAAGAACAGCTACATTGGACTGAACATCTCGTGAACCCAATCAGGTTGTTGCATATTGCATTTAGACAATAATAGTAGAGAAGATATATATATGCTTAGTGAATATGCTGAGTTAATAGCACAGAGTCCTGTTCTTTAGTGAGCTGTATTCGAAGTTGGTAGTGACCAGTGACAACATAATTTCTTTCCTGTATGGGTTATTTCCATTGAGAGAAGCAAATGTGAGTGAATTTGTTGAGCTTAACAAGATATTTAATCTTTGCTTCAGGGAGCCCGCCGATACTTGGGGATGAAAGCGATGATGTTGATGCGGATGATGCTAGTGATGTGAACTATCCAACATCCGGCAACCAGGACCATAAGCACAAGATTGCCGAGAGGATGCTCACCTGGCGCATGAACTCTGGGAGGAATGATGATATTGTCCATTCTAAGTATGATAGTGGTGAGATTGGTCATCCCAAGTATGACAGTGGTGAAATCCCTCGCATATATATCCCATCGCTCACTCACAGCCAGGTTTGTTAGAATTTTTGTTGATAGCGTGAAGTCGTTAACCCTTCAGGGTATGTGCAAAGATTGAACTAATATTTAGTTTCTTCCTCTCGATTAATTCTATAGATCTCAGGTGAAATTCCTGGAGCGTCCCCTGATCATATGATGTCTCCCGTTGGGAACATTGGCAGACGTGGGCATCCATTTCCCTATGTGAACCATTCACGTAAGTTTATCTATCATCAAGATCTCATGTTTCGTTGCATCGACTGGGAAAATTTAATTATTCTTTGTTGCTCAACAGCAAACCCATCAAGGGAGTTTTCTGGTAGCCTTGGCAATGTTGCATGGAAAGAGAGAGTAGATGGCTGGAAAATGAAGGATAAAGGTGCAATTCCCATGGCTAATGGTACTAGCATTGCTCCTTCAGAAGGTCGTGGGGTTGGTGACATTGATGCATCTACTGACTATAACATGGAGGACGCCTTACTGTGAGTTCTGATATGCTTTTGTCCACCGTTAGTCATCTATGAATTCTACCAGTAATTAATATTCCTTGTATCTGGTGTACTAACTTGCACTAGTTTGTACTTGGAAGAACATAGGAAAAATTCTTGCATAATTCGAAATATAATTATTTTGTGTTTACAAGTATACCTTGCTATTAAGCAAGGCAATATGCACATTTAATGGATCAGATTCTAAATGGTTGTACATCTCTGAACCTTATAATGCGGACTTATCATATAGCTTGCCACTATAAATGTTGTGCTATCTGTATTACAGGAATGATGAAACACGCCAACCTCTATCGAGAAAAGTGCCAATTTCGTCATCCAGAATAAATCCGTACAGGATGGTTATTGTGCTCCGATTGATTGTCCTATGTATATTCTTGCACTACCGTATCACAAATCCTGTGCGTAATGCATACCCGCTATGGTTGCTCTCTGTCATATGTGAGATTTGGTTTGCTCTATCCTGGATTCTGGATCAGTTCCCCAAGTGGTCCCCAATCAACCGTGAAACTTACCTGGATAGGCTGGCTTTAAGGTGATGTACAATATTTACCTCTGATACACCATTCCTGCGTTAGCACTGTAGTACTGATTACTGACAATAACAAAATATCACTTGCACTCTCAGGTATGACCGGGAAGGTGAACCATCTCAATTGGCTCCTGTTGACATTTTTGTCAGTACTGTGGATCCTATGAAAGAACCTCCTCTTGTCACTGCCAATACTGTGCTCTCCATCCTTGCTGTGGATTACCCTGTTGATAAGGTATCTTGCTATGTGTCTGATGATGGAGCTGCAATGTTAACATTTGATGCGCTTGCTGAGACTTCAGAATTTGCTAGAAAATGGGTACCGTTCTGTAAAAAGTACAGCATAGAACCCAGAGCTCCAGAGTGGTACTTTGCACAGAAAATTGATTACTTGAAAGACAAAGTTCAGGCTTCTTTTGTTAAAGATCGTCGTGCCATGAAGGTAAATTTGGTTTATATGTGTGTACTTTTTTGTTGTTTTTTTTTTGGTGTAATCTCGCATTAATGTCTGTTGCAAAACCAAAATCCAGAGGGAATATGAAGAATTTAAAGTTCGTGTTAATGCTCTCGTCGCCAAGGCACAGAAAGTTCCTGAGGAAGGATGGATTATGCAAGATGGCACACCTTGGCCTGGTAACAATACCAGAGACCATCCTGGAATGATTCAGGTAAATATCACTTAGATATTGCCATTGTGGTGTGGTTATTGATCCAGCAATTTTCTTACTCTTGACGTCTGGTCATGCTCAGGTTTTCCTTGGTCATAGTGGAGGCCTTGATACCGAAGGCAATGAGCTTCCTCGTTTAGTCTATGTGTCTCGTGAGAAACGTCCTGGATTCCAACACCATAAAAAGGCTGGTGCTATGAATGCACTTGTGAGTAGCAGCTAGAGTGGTGTTGCTTAAGTGAGAAGTATCTTGTTTAATTCATTTACTTGATATGTGGAATTTGAAACTGCAGGTTCGTGTATCAGCTGTCCTTACTAATGGACAATACTTGTTGAATCTTGACTGTGATCACTACATCAACAATAGCAAAGCTCTCCGAGAGGCTATGTGCTTCCTTATGGATCCAAACCTAGGAAGGCGTGTCTGTTATGTCCAATTCCCTCAGAGGTTTGACGGTATCGATAGAAATGATCGATATGCAAACAGGAACACCGTGTTTTTCGATGTAAGCTTGGTTCCCTTTAAGATTCTTGGATGCTTCACTTCACGCTTTAGCAAACATCAATAACTGTTGATGGATCAGCAATATTTATGTTTCTATGTGATGGATTTGAACATTTCTGGAGTTTGTCAAGTAACTTATCTGCATTTCTGCTTGCTGCAGATTAATTTGAGAGGTCTCGATGGTCTCCAAGGACCAGTTTATGTGGGAACCGGTTGTGTGTTCAACAGAACAGCTCTTTATGGTTATGAACCCCCCATTAAGCAGAAGAGGCCAGGTTACTTCTCTTCGCTTTGTGGGGGACGAAAGAAGACAAAAAAGTCGAAGGAGAAGAGCACGGAAAAGAAAAAGTCACACAAACATGTGGACAGTTCTGTGCCAGTTTTTAATCTTGAAGATATAGAGGAAGGGATTGAAGGTACCATCGAGTCTGGTTTTTGTTCAATTACATGTTTTTGCTCTTAGATTTTTAGTGATATTTGGCCACCACCATTGCATTGCACCCCACAACTTTTTTCGCAGTATTTCTGTATATGCTTAGGAAGGGAGGGACACTAGGCTTAACTTTTCTCTTACACTATATATTTGACCTGGCACATCATTTTTGTGGCAGGTTCTGGATTTGATGATGAGAAATCACTACTGATGTCTCAAATGAGCTTAGAGAAAAGATTTGGTCAATCTAGTGTTTTTGTAGCCTCCACTCTGATGGAATATGGTGGTGTTCCTCAATCCGCAACTCCAGAATCTCTTCTGAAAGAGGCCATACATGTTATCAGCTGTGGCTATGAAGACAAAAGTGACTGGGGAACTGAGGTAATAAAGCTATGGCATTCATGCTCTGCATTACATGCTACTAGCCTACCAGTACAAATTATACAATGTAACAGAAAATGTCGAGATATCAAGTGGTCTTTCTTGTACAAAATTAAGGACGCAATTTGATTTCTGTTCTGATTCGCACAAGTACTTCTGAGTTCATGCGAAGAAACTTGACTAAATTGGCATCTCCTCTCAGTTGCCATTATAACTTTGTTTATGATGCTATGTGACTTGCAGATTGGATGGATCTATGGTTCTGTTACAGAAGATATTCTCACTGGATTCAAGATGCATGCACGTGGCTGGCGGTCAATCTACTGCATGCCTAAGCGACCAGCATTCAAGGGGTCTGCCCCAATTAATCTTTCGGATCGTCTGAACCAGGTGCTTCGGTGGGCTCTTGGTTCTGTGGAAATTCTTTTTAGCAGGCATTGTCCCATATGGTATGGGTACGGAGGACGGCTTAAGTTCCTGGAGAGATTTGCTTACATCAACACCACTATTTATCCACTCACATCGATTCCACTCCTCTTGTACTGCATATTGCCAGCTATCTGTCTTCTCACTGGGAAGTTCATCATACCAGAGGTAAATATGTAGAATTGTTTTTCCTCTTCTGCAGACGAAATCGCAGAACAGCATGCGCTGACTGACTTATTTTGGACTGCAGATTAGCAACTTTGCGAGTATTTGGTTTATCTCTCTCTTTCTGTCAATCTTTGCTACTGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGCATCGATGAATGGTGGAGGAATGAGCAGTTTTGGGTTATTGGAGGTATTTCCGCTCATCTATTTGCGGTCTTCCAGGGTCTGCTGAAGGTGCTTGCTGGAATTGATACCAGCTTCACTGTCACCTCAAAGGCCTCTGATGAAGAAGGCGATTTCGCTGAGCTCTACATGTTCAAGTGGACAACCCTTCTGATCCCACCGACCACTATTTTGATCATCAACCTGGTCGGTGTTGTTGCTGGTATCTCCTACGCTATCAACAGTGGCTACCAGTCATGGGGTCCGCTCTTTGGGAAGCTCTTCTTTGCCTTCTGGGTGATTGTCCACCTGTACCCCTTCCTTAAGGGTCTCATGGGTCGGCAGAACCGTACACCGACCATTGTTGTTGTTTGGGCCATCCTCCTTGCATCGATCTTCTCCTTGCTGTGGGTTCGTATCGATCCATTCACCACCCGTGTCACAGGCCCTGATACCCAAAAATGTGGTATCAACTGCTAG</dnaseqindica>|
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| − | Link = [http://plants.ensembl.org/Oryza_indica/Gene/Summary?g=BGIOSGA009600 EnsemblPlants:BGIOSGA009600]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Indica mRNA]]
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| − | [[Category:Oryza Sativa Indica Group]] | |
| − | [[Category:Indica Genes]] | |
| − | [[Category:Indica Chromosome 3]]
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| − | [[Category:Chromosome 3]]
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Annotated Information
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Structured Information
