Difference between revisions of "Os07g0495300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0495300| Description = Pentatricopeptide repeat containing protein| Version = NM_001066230.2 GI:297607251 GeneID:4343289| Length = 4171 bp|...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0495300|
 
GeneName = Os07g0495300|

Revision as of 20:36, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0495300

Description

Pentatricopeptide repeat containing protein

Version

NM_001066230.2 GI:297607251 GeneID:4343289

Length

4171 bp

Definition

Oryza sativa Japonica Group Os07g0495300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19196394..19200564

Sequence Coding Region

19196394..19196456,19198498..19200114,19200478..19200564

Expression

GEO Profiles:Os07g0495300

Genome Context

<gbrowseImage1> name=NC_008400:19196394..19200564 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19196394..19200564 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatctcgcccacgccggccaccaccacctccgattccaagctcaccgttgacttcttcatcctcccctccaactccaagcaggctgattgctacgggtcatggaggaggcaatccgctctggccatacatcaccttcccatgggcacgattgcagccaagattctgccgtgggaagcgccatctcgtgagaccctactgaggacaatcaatgctgctctcgatgacggcaatgtcgacgacgtgctgcaagcatttgccaattacaagaccctgcatggccttcctgagccgcgggtgttggacaggatgatcgtgtcgctgtcctatgcgtctagcaggagatggcttcagagggcattcgacatggtcttgtcagtttaccaatgcaatggcaaccttcttaattgtggctcgctgatgaagctagctctggcgcttgccagagatcagatgccgattccagcctccacagtggtgaggatcatattggagagcggcaagcttcctgatgttgatatgctgaccatggtgtacttgcatatggtgaagtcacaagtaggatcctatcttgctgctgatgttttgtgtgagacctgcgagtgtttcttggagcagattggagatagaaggcagctgaaaaaactggatccaataaagagtaatgttaccttgtttaatatggttttgaagtcatgtgtcgatttcaaatgcatgatcaaggcccaaagaataatggagcttatgtcgctggttggggttgtggccgatgtaaatacagtggctatcgctagccttgtctttgagatggttgggcagcaagttgaattggtgaacatgaaaagaagtatcgattcttttgcatctttgccgttcattcagcactatctatatttttatggaagtctgctgaacctgcatttcaaatataatgacatggatgccgctgctcagcttttggttgatctgtatcgacaacaaaagcctcgtgcttttgttggtgatagtgtccataaacaaggtgtaatacagataggctctggcaacctgaaaactggattcagaataatgtttgaccccataaaagtggacaaaggtttcgttttagatacagaaagtcaatttggccttcttgctgttattgatggaaatattcgtcctagtgagaaggctcttgctaaattcattgttggctgtttgaaagcaagtaaagtgcgtgcattgtctagctttcttattacattacacaaggaagatctaaaggggccatctcattcagatgtaattagtgcatgcattctgatgggatggttgcatgctgctcatgatatcctggatgatttagagtcagctgagattcctgttctaatctgtacttacatgtctcttttgagagcatatgagaaggagaataaaccggaagaagttaataggtttctccaacagatacaaaagaaagcatatacaatggctgattttcataccaatccatcctttaccataaaggatgttgccaaaatagtcaaggatgagatgcccctcagaaattcgtctttgctttccagtttggttcaagaaatagaacattatagctctcgagagcacttaacttttgagttcaataattcaattcttttcttctgcaaggcaaatatgatggacgatgctttgagcacatataagcggatgagagagcagaattctggttcagaaagaatgcgatcatcctcattgcaaacctctgctttgtattataacccataa</cdnaseq>

Protein Sequence

<aaseq>MAISPTPATTTSDSKLTVDFFILPSNSKQADCYGSWRRQSALAI HHLPMGTIAAKILPWEAPSRETLLRTINAALDDGNVDDVLQAFANYKTLHGLPEPRVL DRMIVSLSYASSRRWLQRAFDMVLSVYQCNGNLLNCGSLMKLALALARDQMPIPASTV VRIILESGKLPDVDMLTMVYLHMVKSQVGSYLAADVLCETCECFLEQIGDRRQLKKLD PIKSNVTLFNMVLKSCVDFKCMIKAQRIMELMSLVGVVADVNTVAIASLVFEMVGQQV ELVNMKRSIDSFASLPFIQHYLYFYGSLLNLHFKYNDMDAAAQLLVDLYRQQKPRAFV GDSVHKQGVIQIGSGNLKTGFRIMFDPIKVDKGFVLDTESQFGLLAVIDGNIRPSEKA LAKFIVGCLKASKVRALSSFLITLHKEDLKGPSHSDVISACILMGWLHAAHDILDDLE SAEIPVLICTYMSLLRAYEKENKPEEVNRFLQQIQKKAYTMADFHTNPSFTIKDVAKI VKDEMPLRNSSLLSSLVQEIEHYSSREHLTFEFNNSILFFCKANMMDDALSTYKRMRE QNSGSERMRSSSLQTSALYYNP</aaseq>

Gene Sequence

<dnaseqindica>4109..4171#451..2067#1..87#atggccatctcgcccacgccggccaccaccacctccgattccaagctcaccgttgacttcttcatcctcccctccaactccaagcaggtatggcgcagccttcttgctgctttcctaaaatctactctctccgtttcttttagttcaacttttccttttaagtttgatcaagtttgtagaaaaatataacaacatttccaatataaaacaaatatattataaaaatatattccgtgttatatttaatgaaactaatttggttttgtagatgttgctaatttttttataaacttagtcaaacctatagaagtttgactaagaaaaaaacaaatcaacttataatatgaaacagagggagtataagataaatggatatattttcctttactaaaatctgtaaaaaaaaatgaaaatagttctcctttagttcatatagtttcttgttattaggctgattgctacgggtcatggaggaggcaatccgctctggccatacatcaccttcccatgggcacgattgcagccaagattctgccgtgggaagcgccatctcgtgagaccctactgaggacaatcaatgctgctctcgatgacggcaatgtcgacgacgtgctgcaagcatttgccaattacaagaccctgcatggccttcctgagccgcgggtgttggacaggatgatcgtgtcgctgtcctatgcgtctagcaggagatggcttcagagggcattcgacatggtcttgtcagtttaccaatgcaatggcaaccttcttaattgtggctcgctgatgaagctagctctggcgcttgccagagatcagatgccgattccagcctccacagtggtgaggatcatattggagagcggcaagcttcctgatgttgatatgctgaccatggtgtacttgcatatggtgaagtcacaagtaggatcctatcttgctgctgatgttttgtgtgagacctgcgagtgtttcttggagcagattggagatagaaggcagctgaaaaaactggatccaataaagagtaatgttaccttgtttaatatggttttgaagtcatgtgtcgatttcaaatgcatgatcaaggcccaaagaataatggagcttatgtcgctggttggggttgtggccgatgtaaatacagtggctatcgctagccttgtctttgagatggttgggcagcaagttgaattggtgaacatgaaaagaagtatcgattcttttgcatctttgccgttcattcagcactatctatatttttatggaagtctgctgaacctgcatttcaaatataatgacatggatgccgctgctcagcttttggttgatctgtatcgacaacaaaagcctcgtgcttttgttggtgatagtgtccataaacaaggtgtaatacagataggctctggcaacctgaaaactggattcagaataatgtttgaccccataaaagtggacaaaggtttcgttttagatacagaaagtcaatttggccttcttgctgttattgatggaaatattcgtcctagtgagaaggctcttgctaaattcattgttggctgtttgaaagcaagtaaagtgcgtgcattgtctagctttcttattacattacacaaggaagatctaaaggggccatctcattcagatgtaattagtgcatgcattctgatgggatggttgcatgctgctcatgatatcctggatgatttagagtcagctgagattcctgttctaatctgtacttacatgtctcttttgagagcatatgagaaggagaataaaccggaagaagttaataggtttctccaacagatacaaaagaaagcatatacaatggctgattttcataccaatccatcctttaccataaaggatgttgccaaaatagtcaaggatgagatgcccctcagaaattcgtctttgctttccagtttggttcaagaaatagaacattatagctctcgagagcacttaacttttgagttcaataattcaattcttttcttctgcaaggcaaatatgatggacgatgctttgagcacatataagcggatgagagagcagaatgtaagacccagtctgcataccttttgccacatactgtgtggatattcttcactaggcatgcatagggagattgccatgctgtggggagaaataaagcgcagactcgaatatggagagctaactgtggatagagacttgcttgactgcttgattttgaatttcctaaacgctggctattttgcaagagtcatggaggttttaagttacatggcaaaccgtaaaatgtactgtgacaagtggaaatacaagcaagtttttctaaagctacacaagaatctgtatagaaatttgaatttgctgcatgaaaaaacagaacaacagagtaaaagaatagaagatgtcagagctttcagatcctgggcaggcgtcaaataggtaaaatgactgcagcactgtaatccttttgcatttagagaacactcttcttgtgcatgcacatctgtacagaattcttccgatgtaacatcatccgcatctgttgtataattctgtattgtcctttcaagtctttccatttattcttgatggttagttccaattccttagtactcactgtaacatcttacatgcatggattttctcttctttgacctctaaatccactttcaaggcttctaaatcaactttcaaggcttcaactatcgattttttttttatataaattgcccgtcttttctttcatctgttttggcatggatcatgaatctcatagcagcacatatttcctcttcaggttccaggtggttgctaattcttacatttaaatatgttgaccattgataatcttattgataatcttattgtagtactggccttgtggcaatcttagactactgtcttaccaacagtaatgtttctttcttgtgatattctacaaagaggctatgctgatacagaagatcatgctgttgcttcaagttgtcaagtaattatttttgtgggaaaccgactccttgaccttacgtcacaagcaagatcaattgcatagaccacaaatggtatttattattttgaaacagttgtacactttgacatctctgacaatcatttattaccgatttcaagtttttaatgaaactgatgaacttgtaggcctgatgggagtttgatagagcacttgcagtccagaccttactggctactaaggtttgccatcactaataccagaattgtccagtactaccatgtggggtacacaacttgaacagtaactttttttagaggaacttgaacagtaacttggcatgcttaactagttgctgtggttctagaggacacagttatgaagttgaggcagatattctaattgtgatattctttttaatatagtcatatgacataagtcctggaaactctctatttcctaaatatgtgcagataatagagcaaaaacaggaaaaatgtttcaataacacagttgatgttcgtgcttaatgattccaacttttacctaaaaacgctcacatgttgaaggatgccatattgctatgaatactaattttaggaagtttttccttttagttgagcatagctgtccatcagctgctcaattacaagaaatattttacttctaatagtttttaggctttaagcatatattgcatttgactttgcacgttaaaaactgatgctaagtttccacatatcaatttctttactgttggtgtgttcattatttgattcggtgcctctttggaagcacgggtaattggtttggcttctttcttaactttagggctgacatcattgttggggatttctgcaggtgctgtgtttataaaacccaaaggatagttggattgatcagttggttctttgtaattttagttaaatgcaggactatggctatgtcacagtatttatctagtaccaggttgatgtaagcaggtgcattctgtagatcgtgtctttccgaaatacctagcttggttgctcttatgctaaatataatcaattatgatgtgtctatgctttctgggtgcactatcattttgccatgaacttgtgattgttcccatccaaaacgtggctatttgtgtagtctggttcagaaagaatgcgatcatcctcattgcaaacctctgctttgtattataacccataa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0495300, RefSeq:Os07g0495300