Difference between revisions of "Os07g0508000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0508000| Description = Similar to ADR224Wp| Version = NM_001066277.1 GI:115472286 GeneID:4343339| Length = 8172 bp| Definition = Oryza sat...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0508000|
 
GeneName = Os07g0508000|

Revision as of 20:36, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0508000

Description

Similar to ADR224Wp

Version

NM_001066277.1 GI:115472286 GeneID:4343339

Length

8172 bp

Definition

Oryza sativa Japonica Group Os07g0508000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19951081..19959252

Sequence Coding Region

19951310..19952906,19952995..19953147,19953242..19953303,19953592..19953840,19954190..19954369
,19954450..19954679,19955295..19955472,19956064..19956169,19956523..19956620
,19957420..19957550,19957645..19957824,19957916..19958180,19958294..19958364
,19958444..19958659,19958884..19959004,19959099..19959104

Expression

GEO Profiles:Os07g0508000

Genome Context

<gbrowseImage1> name=NC_008400:19951081..19959252 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19951081..19959252 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggggacatggacgcgacgatgacaaccctggggccggaggacgacacgggcgcgcaggggctgatcctgccgagcagggatagggtcatgtaccggccgccgccggggaagtccgccctaggtttggacctcctcgcgcacaggaaacgggaagcagaaggcggcaatgccttcaagccgccgcctcagaaggtagtggcagctgctacttcaatcgatgaagatgagaagccgggacctgcggagagtgatgagaagagcctgagcagtggccatcgtggcagtgtttctcgccgctatcgaggagccaactctgatgagagaacctctttcaaagaacctaccatcactgatgaggatggaaggggtccttcacccagtcaccgagatggatcttatcgacaagatacccacaaatctagaagttctcaaggttcccattctcgtagcactcctcgtagatatgatgactatgaggataggggatcccgtgataaacatggagaacgggaaagatctgcatccattggctatagtagcagtggaaggcggggacaccatgatgatagagaatcgcataataggcgtgatgaacgtgagagatctacatccgttgactacatgaacaagcgaagtcggcatgagcatagctcaagaagctcaagaacacctgcaagatctgattgggacagtggccgatgggaatgggaagatacacctcgtcgggagtaccgtgatgatcgctcaaattcccatagacaacatccttcaccatctcctatgcttgcagctgcatcccctgatgcacgcttagtgtctccttggctaggtgggaatacgccacgttatgcagcatccccatgggataacgtatctccatcacctgcaccaattcgcgcttctggttcatcaaaagggtcttcttatccacgttctggtggaagatcccaccagcttactttttcgtctacatctgcatcaaatgacagggaatctgatagaagcccctcagatgccgatggcaactatgagatatctgaagaaatgatgcaggagatggattataatgctgatcgtgcgtggtatgattgtgaagaacacaacaccatgtttgatggtgataattctatgtatcttgaagatgatagttcctacaaaaagagggaagcacaattaccaaagcggctgactcgtaaagatggcagtctgatgacccttgctcagagcaagaagttatcacagatgactgctgataatgctcaatgggaggatagacagttgttgagatctggagctgtcagaggaacagaggtgcagacagaatttgatgatgaggacgaaaggaaagtaatacttcttgttcatgacacaaaacccccattcctggatgggcgagttgtattcacaaaacaagcagaacctgtaatgccactgaaggacccaacctccgatatggcaatagttgcacgcaaaggttctgctttggtcagggaaattcgtgaaaaacagagcatgaataagtcacgccaacgcttttgggagctcgctggatctaagcttggaaatattttgggtgttgagaaaacggctgaacaggttgatgcagatactgctactgttggtgaccaaggtgagattgattttaaagaggaagcaaaattttcacagcacatgaaggtaaaagcagaagctgttagcgactttgcaaaatcaaaatctctttctcaacagaggcaatatcttccgatatttactgtacgggatgacttgctacaggttgtgcgtgaaaatcaagtagttgtggtggttggtgaaactggctctgggaagactacccagctgactcagtatctgcatgaggatggatataccaccaccggcattgttggctgtactcaacctagacgtgtggctgccatgagtgttgctaaaagagttagtgaagaaatggagactgagttgggacataaagttggatatgcaattcgatttgaggacatgactagtcccaacactataataaagtatatgacagatggagtgctgcttcgggaaaccttgaaagatgctgaccttgacaaatatcgtgttattgtcatggatgaagcacatgagagatcactcaatactgatgttttgtttggcatactgaagaaggttgttgcacgtcgacgagattttaagctaattgtcacatctgcaaccctaaatgcggacaaattctcaaaattttttggaggagtgcctgtcttccatattcctggcaggacatttcctgtaaatatcatgttcagcaaaacaccatgtgaagactatgtggaagcggcagtgaagcaggctatgacaatccacataaccagtggccctggggatatacttatatttatgacagggcaagaggaaattgaggctacctgctatgcgcttgctgagcgcctggagcagctgatatcatcatccaccaagactgtacccaagctctccatcttgcccatctactcgcagttgcctgctgacctgcaggccaaaatctttcagaaggcagaagagggcactcgcaaatgcattgttgctaccaacattgctgagacctcgctcactgtggatggtattttttatgtcattgatactgggtatggaaagatgaaggtgtacaatccacggatgggtatggatgctcttcaggtttttccagttagtcgagcagctgcagatcagcgtgcaggacgtgcaggaagaactggtcctggcacatgctacagactgttcacagaatcagcttaccagaatgagatgctacctaacccagtgcctgagatccaaaggaccaatctggggaatgtggttctgctactgaaatctctgaaagtcgaaaacttgcttgactttgacttcatggacccacccccgcaggagaacatcctcaactccatgtaccagctctgggtgttgggtgccttgaacaatgttggtgctcttacagtaataggttggaagatggttgaattcccgttggacccaactctagcaaagatgcttctcatgggagaacagctggagtgccttgatgaagtactgaccattgtgtcaatgctctcggtgccctcagtcttctttcgtcccaaagatcgagcagaggagagtgatgcagcaagggagaaattttttgttccagaatctgatcatttaactcttctgaatgtctacctgcaatggaagtcgaaccaatatcgtggagactggtgtaatgaccacttcctccatgtcaagggtctccgaaaggctcgagaagtaaggtcacagctattggacatactgaaaaccctgaagatcccactgacatcatgccatatggaatgggatgtggtgagaaaagccatctgctctgcatacttccataatgccgcgaggttgaagggtgtcggggagtatgtgaactgccggaacgggatgccatgccacctccaccccagcagtgcactctacggccttggttacacccctgactatgttgtctaccatgagcttgtcctgacgaccaaagagtacatgcagtgcgtcaccgctgttgacccgcagtggctggcagagttgggccctatgttcttctctgttaaggaaaccgacacctcgctcctcgaccataagaagaggcagaaggaggacaagaccgcgatggaggaggagatggagaagctgaggcaagaacaagccgaggccgcacggcttgagaaggagagggagcgagagaagagagctaagcagcagcagcaagtttctatgccgggcttgaagaaaggctcgacatacttgaggcccaaaaggatgggtctatag</cdnaseq>

Protein Sequence

<aaseq>MEGDMDATMTTLGPEDDTGAQGLILPSRDRVMYRPPPGKSALGL DLLAHRKREAEGGNAFKPPPQKVVAAATSIDEDEKPGPAESDEKSLSSGHRGSVSRRY RGANSDERTSFKEPTITDEDGRGPSPSHRDGSYRQDTHKSRSSQGSHSRSTPRRYDDY EDRGSRDKHGERERSASIGYSSSGRRGHHDDRESHNRRDERERSTSVDYMNKRSRHEH SSRSSRTPARSDWDSGRWEWEDTPRREYRDDRSNSHRQHPSPSPMLAAASPDARLVSP WLGGNTPRYAASPWDNVSPSPAPIRASGSSKGSSYPRSGGRSHQLTFSSTSASNDRES DRSPSDADGNYEISEEMMQEMDYNADRAWYDCEEHNTMFDGDNSMYLEDDSSYKKREA QLPKRLTRKDGSLMTLAQSKKLSQMTADNAQWEDRQLLRSGAVRGTEVQTEFDDEDER KVILLVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIVARKGSALVREIREKQSMN KSRQRFWELAGSKLGNILGVEKTAEQVDADTATVGDQGEIDFKEEAKFSQHMKVKAEA VSDFAKSKSLSQQRQYLPIFTVRDDLLQVVRENQVVVVVGETGSGKTTQLTQYLHEDG YTTTGIVGCTQPRRVAAMSVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMTDG VLLRETLKDADLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNA DKFSKFFGGVPVFHIPGRTFPVNIMFSKTPCEDYVEAAVKQAMTIHITSGPGDILIFM TGQEEIEATCYALAERLEQLISSSTKTVPKLSILPIYSQLPADLQAKIFQKAEEGTRK CIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAG RTGPGTCYRLFTESAYQNEMLPNPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPP QENILNSMYQLWVLGALNNVGALTVIGWKMVEFPLDPTLAKMLLMGEQLECLDEVLTI VSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQYRGDWCNDHF LHVKGLRKAREVRSQLLDILKTLKIPLTSCHMEWDVVRKAICSAYFHNAARLKGVGEY VNCRNGMPCHLHPSSALYGLGYTPDYVVYHELVLTTKEYMQCVTAVDPQWLAELGPMF FSVKETDTSLLDHKKRQKEDKTAMEEEMEKLRQEQAEAARLEKEREREKRAKQQQQVS MPGLKKGSTYLRPKRMGL</aaseq>

Gene Sequence

<dnaseqindica>6347..7943#6106..6258#5950..6011#5413..5661#4884..5063#4574..4803#3781..3958#3084..3189#2633..2730#1703..1833#1429..1608#1073..1337#889..959#594..809#249..369#149..154#gattcggaggggccaaaatcaaaatccacccgccgacctcttcccctcccccctctctttccctctcgccgccgccgccgccgattcccagtcgaaccggcgccgcccggtgctcggaggccgccctccgctccgcccgccggcgaccatggaggtgagtaatctgtttcgagcgcgttggggttttggggtagtcagcgagcttttggtctcacgccgagatggcgcttcctctctctttgttccagggggacatggacgcgacgatgacaaccctggggccggaggacgacacgggcgcgcaggggctgatcctgccgagcagggatagggtcatgtaccggccgccgccggggaagtccgccctaggtatggtggtgcttggttttacttctgcttctgtatttgacgagacttcaggaaattttgattttaagtggatttctagagttgctagggagttcgatttccgcgagcgagattagtgtgtaaaacttgatgagcagatcccaatttgaatttgactcagaaatcgtcgaggcctgcaaaatctagagctcgggtgagctgattctgagatgtggtttttgcaggtttggacctcctcgcgcacaggaaacgggaagcagaaggcggcaatgccttcaagccgccgcctcagaaggtagtggcagctgctacttcaatcgatgaagatgagaagccgggacctgcggagagtgatgagaagagcctgagcagtggccatcgtggcagtgtttctcgccgctatcgaggagccaactctgatgagagaacctctttcaaaggtcctatatatatacactcttgtatgttacaaatgcaaatgattgtccattgtaactaaagcgttatcgccattttcagaacctaccatcactgatgaggatggaaggggtccttcacccagtcaccgagatggatcttatcgacaagatgttagtgattacttgtgtcccatattactttgggaacttcataaagaatctggctgttttattttctcttcaccttactaaccaagtctgtttctgttcatgtcgttttacagacccacaaatctagaagttctcaaggttcccattctcgtagcactcctcgtagatatgatgactatgaggataggggatcccgtgataaacatggagaacgggaaagatctgcatccattggctatagtagcagtggaaggcggggacaccatgatgatagagaatcgcataataggcgtgatgaacgtgagagatctacatccgttgactacatgaacaagcgaagtcggcatgagcatagctcaagaagctcaagaacacctggtatcatgtttgttatcttattcttttcatgcttaggctaattggcttgtcacttgctgataaaattgtggctgtgattgcaaattgttagcaagatctgattgggacagtggccgatgggaatgggaagatacacctcgtcgggagtaccgtgatgatcgctcaaattcccatagacaacatccttcaccatctcctatgcttgcagctgcatcccctgatgcacgcttagtgtctccttggctaggtgggaatacgccacgttatgcaggtaacaaaagctcagctattcaatgttgtttgcacttttcttctttaatttaaatcaaataaatcatacttctattgttgttttgaatatccagcatccccatgggataacgtatctccatcacctgcaccaattcgcgcttctggttcatcaaaagggtcttcttatccacgttctggtggaagatcccaccagcttactttttcgtctacatctgcatcaaatgtaagtcaggattctgttttcacaaaacatgcctttatgtaggaaaaatcaaaacatgcctttatacaggaaaaatcaggtgttttttttttttgcattcatctcatatgttgcaagttcggtatgattattttaagacatccatacacccaggaggtgaagtagagtagacgaagattgtagtcctatgggctatatacattgtagagagttggaagccccattcatacattcctaaacactatcacatctattgagaaattaatcctccttttagcacgacagtcttttaatgttgaatctcctggaatgccgatttttagaagtggtaactctgctggtaatttaattcaaccatttagaccagtgctcgaaacaatgataaatgtaatgaagcatgtattttgttcacttttttctctctatctgtgtttttagaataattgtcattggatgttcgatatttatttctatgaactgaacgtgtgtatagcattacttaaactataactgaagtaatgttacgaaattaccatgtgactgatctaagttgctttaatttttctgcctctttctgtctgaagagtattacagttaggctactatgtaattcatttaattatttcatgtactttcaatcaaacaatagacttgattgagtctatttggtatttactgacagaagtctaactaactttaagtttcatgttgtttgtggatcactttatagtatattgcaagttctcattttgtttcttcactggtcattctgacaataacctctaccctgttatctcaggacagggaatctgatagaagcccctcagatgccgatggcaactatgagatatctgaagaaatgatgcaggagatggattataatgctgatcgtgcgtggtacttttctttcctcataaaatttccctggtttttgtattcaaaaggatgatgtaggtgtctgatagaaaaaaaatatatttgcaaaccaagtgatcaacaaagcctttcaattgctgctgttgcatttattggctccatttataatagctaaaaatggtaatggcatctgaagtaagttggcacaatgatgtttttcatatatctgtaacaaaattctgattttatgccatagttctatccagacatggtagtgtagagatatgaaagtacaatgatttttgacattctcttatcattatacaacaacaaattgattacacattcttctaacctttacaaatatactccaggtatgattgtgaagaacacaacaccatgtttgatggtgataattctatgtatcttgaagatgatagttcctacaaaaagagggaagcacaattaccaaagcggctggtaagttccttgcttgtttacatctcccgtgcttccatgcacttcgtgttagccttcataagttcttatttgttctgagtaattgagtagaacttattgcagctacagcctctatgaaaccatgaatatatctgattaattagtaaatgataaggtcgtgctattgtggcgctggactgaatgtatggatctgatacttctatcttctagcaagactccgcctttgtaaaaatgtcttgcattttgtgatttactgtaaacatccgataatttgtactcagacatgtaaaagtgcaccggtaagaagtaaagtaaggcttgagaataccaccaaattagatgtatgttttttccttgttcaagttccttatgtatattatgaaaattgcatcatcattaggaaattgtattcatttaacttttttcaagactgccaaacccatgtgcagcaagacctgcaaaaaattggatggtcaagaattatccacttagtttttcagtaaatatagttattttgtaataatttttcatatctttaacttgtagagaatgtcttgtattctgatttcttactatttttattgggtgcagactcgtaaagatggcagtctgatgacccttgctcagagcaagaagttatcacagatgactgctgataatgctcaatgggaggatagacagttgttgagatctggagctgtcagaggaacagaggtgcagacagaatttgatgatgaggacgaaaggaaagtaatacttcttgttcatggtacgttcttcgaatatcgcagcctcttatcgatgttatagttgtcactaaacaagctacgaaaatgtttggaaagcatctatctatttctcatgtaatggtgtatatgcaattttacttatgaaaataatagacactatttatgttggtaaggtaagctcgcagttgtactaactgatgaggtccttgcatctatttatcttattatgcatttactattacgtgcatttgctagtagatgtggctgcttcatgtgatccttcttgtagatactctcggaacttctatgtcgcagaaagaatgaaacaagcagatattgaattaatagcggttatgagctgtgaacatatgtaggagaggtgttatgtaccattttcagggcacatatttccacctttcctgtctatgtcagtctgaaacttctaacctgcattaggagttatctatgttctctgttttctctgttgtacatgctacattgtatcgaattttgaagagaatagaacattacctagcgtgctgcatacttgtttcacaaagtttttttactactacttgtttacaatatattgatgctgttgaacttaaaaatgctgacggtataattttttgcagacacaaaacccccattcctggatgggcgagttgtattcacaaaacaagcagaacctgtaatgccactgaaggacccaacctccgatatggcaatagttgcacgcaaaggttctgctttggtcagggaaattcgtgaaaaacagagcatgaataagtcacgccaacgcttttgggagctcgctggatctaagcttggaaatattttgggtgttgagaaaacggctgaacaggtagattatttgccataatatatatagtcctaatagtgtttagctggtacgctttacttattttttttttgaaaaatcaggttgatgcagatactgctactgttggtgaccaaggtgagattgattttaaagaggaagcaaaattttcacagcacatgaaggtaaaagcagaagctgttagcgactttgcaaaatcaaaatctctttctcaacagaggcaatatcttccgatatttactgtacgggatgacttgctacaggtttgtaactaaagtttataaactcattttcagtattttatttgcagttttcattttgttttcctatgctagtttacagcatttgttatgtttgaggtatgttgcttttctatagtgtaaattattcaaaaacaaatcggtagaatattttgaatatggttttgatgattgtagtacacctatgcagctatcctcaaggagaaaggtcaagataataattcttgcccttcagaaaattgtaattaatttgaaaatcaagtttcctttggaagatgttgatttttagtttctttcaaaaggatgcagtggtacaagttcttgattaccttgttttgatttcattgagcaggttgtgcgtgaaaatcaagtagttgtggtggttggtgaaactggctctgggaagactacccagctgactcagtatctgcatgaggatggatataccaccaccggcattgttggctgtactcaacctagacgtgtggctgccatgagtgttgctaaaagagttagtgaagaaatggagactgagttgggacataaagttggatatgcaattcgatttgaggacatgactagtcccaacactataataaaggtatattgcttcttgtgttttgatactccttggttgatgacttgtcttttcacttggtagtaggaagtttcctaaaactagaatatgcttaggttagtagcctagtttgggtgcagcattagctattaggttgttagcattatgaattttacatcaaatgaacacaacacacttcatgccagaacaatgttatgccatttaggaaattaaaaaaattgattgatgctttgttgtagtaatggagatctaacatggtttctgcttctgtttgggattttttttgggcagtatatgacagatggagtgctgcttcgggaaaccttgaaagatgctgaccttgacaaatatcggtatgctgatagctctcttaccgttgatagaactaaatacagtatcaaaatactgcttcccaaatgctaaagcacctttccttactttttttagtgttattgtcatggatgaagcacatgagagatcactcaatactgatgttttgtttggcatactgaagaaggttgttgcacgtcgacgagattttaagctaattgtcacatctgcaaccctaaatgcggacaaattctcaaaattttttggagggtaagataacttgctctgtttctttttcctagtaagatttgaatccattttctattttgctaatcttgtaacatttctttatccgcagagtgcctgtcttccatattcctggcaggacatttcctgtaaatatcatgttcagcaaaacaccatgtgaagactatgtggaagcggcagtgaagcaggctatgacaatccacataaccagtggccctggggatatacttatatttatgacagggcaagaggaaattgaggctacctgctatgcgcttgctgagcgcctggagcagctgatatcatcatccaccaagactgtacccaagctctccatcttgcccatctactcgcagttgcctgctgacctgcaggccaaaatctttcagaaggcagaagagggcactcgcaaatgcattgttgctaccaacattgctgagacctcgctcactgtggatggtattttttatgtcattgatactgggtatggaaagatgaaggtgtacaatccacggatgggtatggatgctcttcaggtttttccagttagtcgagcagctgcagatcagcgtgcaggacgtgcaggaagaactggtcctggcacatgctacagactgttcacagaatcagcttaccagaatgagatgctacctaacccagtgcctgagatccaaaggaccaatctggggaatgtggttctgctactgaaatctctgaaagtcgaaaacttgcttgactttgacttcatggacccacccccgcaggagaacatcctcaactccatgtaccagctctgggtgttgggtgccttgaacaatgttggtgctcttacagtaataggttggaagatggttgaattcccgttggacccaactctagcaaagatgcttctcatgggagaacagctggagtgccttgatgaagtactgaccattgtgtcaatgctctcggtgccctcagtcttctttcgtcccaaagatcgagcagaggagagtgatgcagcaagggagaaattttttgttccagaatctgatcatttaactcttctgaatgtctacctgcaatggaagtcgaaccaatatcgtggagactggtgtaatgaccacttcctccatgtcaagggtctccgaaaggctcgagaagtaaggtcacagctattggacatactgaaaaccctgaagatcccactgacatcatgccatatggaatgggatgtggtgagaaaagccatctgctctgcatacttccataatgccgcgaggttgaagggtgtcggggagtatgtgaactgccggaacgggatgccatgccacctccaccccagcagtgcactctacggccttggttacacccctgactatgttgtctaccatgagcttgtcctgacgaccaaagagtacatgcagtgcgtcaccgctgttgacccgcagtggctggcagagttgggccctatgttcttctctgttaaggaaaccgacacctcgctcctcgaccataagaagaggcagaaggaggacaagaccgcgatggaggaggagatggagaagctgaggcaagaacaagccgaggccgcacggcttgagaaggagagggagcgagagaagagagctaagcagcagcagcaagtttctatgccgggcttgaagaaaggctcgacatacttgaggcccaaaaggatgggtctatagatgagaaaacttgatgaaagtattcaatgtactgtgattttgttatatcgagggctcttgtacaaatacagctacgctgactcctgagctattgtagtatgtaccattctgcatgtataacacatggatgaatgtaacgattacgccacatttggcaagtctgcaatgctgtaatgatccttgtcttctgtgttgttgaaacgaagactgttatccttgtttatggttc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0508000, RefSeq:Os07g0508000