Difference between revisions of "Os07g0551300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0551300| Description = Similar to KI domain interacting kinase 1| Version = NM_001066477.1 GI:115472686 GeneID:4343549| Length = 6482 bp| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0551300|
 
GeneName = Os07g0551300|

Revision as of 20:38, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0551300

Description

Similar to KI domain interacting kinase 1

Version

NM_001066477.1 GI:115472686 GeneID:4343549

Length

6482 bp

Definition

Oryza sativa Japonica Group Os07g0551300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22537049..22543530

Sequence Coding Region

22537255..22537563,22537657..22537807,22537885..22538122,22538206..22538416,22538526..22538746
,22539327..22539434,22539550..22539879,22540477..22540787,22542706..22543388

Expression

GEO Profiles:Os07g0551300

Genome Context

<gbrowseImage1> name=NC_008400:22537049..22543530 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22537049..22543530 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcttctcctcctcctcctcctcgtcccctgctgctgcttctcccgttgctgctcgtttggggcgtggtggttgcggcggcggcggcgacggatacgttgaggcagggggagtcgctgacgggggcggcgacgctggtgtcgtcgccgtcgggggtgttcgaggtggggttcttcgcgccggacccgaagctgccgtcgcggctctacctcggcatctggtaccgcagcatctcgccgagaaccgtcgtctgggtcgccaaccgcgccgcgccggccaccgcgccgtcgccgtcgctcacgctcgcggccaacggcgagctccgcgtgctcgacggctccgccgcggacgcggacgcgccgctcttgtggaggtcgaacgcgtccacgcagtccgcgccacgcggcgggtacaaggccgtcatccaggacaccggcagcctcgaggtgcgcagcgacgacggcacgctgtgggacagcttctggcacccgtcggacaccatgctgtccgggatgcgcatcaccgtgcgcacgcccgggaggggcccctccgagccgatgcgcttcacgtcgtggaccagcgagacggacccctcgccggggcggtacgcgctcggcctcgacccggccaactccggccaggcctacatctggagagatggcaatgtcaccatttggaggtcaggacaatggactgggcagaattttgtgggcattccttggagaccactgtacttgtatgggttcaagccagcaaatgatgcaaacttaggtgcatactacacttacactgcatcaaacacatctctgcaaaggtttgttgttatgccaaatggtacagacatctgttacatggttaagaagtcagcacaagagtgggagactgtctggatgcaaccatcaaatgagtgtgagtactatgctacgtgtggcgcaaatgctaaatgcactgccatgcaagatggcaaggcaaaatgtacctgcctaaaaggatttcagccaaagttgcttgatcagtggaatatgggaaattggagtcaaggttgtgtcaggagcccacctttgggttgtcaggtgaaccaaactggggatggatttctttctatcccaaacatcaagtggccggatttctcatactggccatctacggtgcaagatgagaatggatgcatgaatgcttgcctcagcaactgctcatgtggtgcctatgtctacatgactacaataggatgtctactgtggggtagcgacctgatcgacatgtaccagtttcagagtgggggatataccctaaacctcaaacttcctgcttctgagttacgctcacatcatgcagtttggaaaatagccacaatagtgtctgcagtggtgctatttgttttgctagcttgcctcttcctgtggtggaagcgtgggaggaatatcaaagatgtgatgcacaaaagttggaggtcaatgcatacgtctacacgatctcagcagaatagtggtatgctggacatctcgcagtcgattccttttgaagacgacacagaggatggaaaaagtcatgaactcaaagtatactcctttgaccggataaaagctgccacttgtaatttcagtgactccaacaagcttggagcaggaggatttggtcctgtatatatgggaaaattacctgggggagaagaagtagccgttaagaggctttgtaggaaatcaggtcaaggccttgaggagttcaagaatgaggtcatacttatcgcaaaactgcagcatcgcaatcttgtgagactattaggatgctgcatacagggagaagagaagatcttggtgtacgagtacatgcctaacaaaagtctagatgcattcctcttcaatcctgagaagcaagggctcctagactggaggaaacggtttgatataattgaagggattgctcgagggctgttatatctccaccgggactcaaggttgcgagttgttcatcgtgatctcaaggccagcaacattctcctggacaaagacatgaaccccaagatttcagattttggaatggccaggatgtttggaggggatcaaaaccaattcaacacgaatcgtgtggttggaacatttggctatatgtcgccggaatatgctatggaaggcattttctcagtaaagtccgatatttatagctttggagttctaatgttggagatcatcacaggaaagagggctttgagctttcatggtcaacaagactccctaaacattgcaggatttgcatggcgacaatggaatgaagacaagggcgaggaactgattgatccattgataagagcatcgtgctcacttcgacaagtcttgagatgcatccacattgcattgctatgtgttcaagatcatgcgcaagaacgtcctgatatccctgcggtcatactgatgttgagcagcgacagctccagccttcccatgccaagaccgcctaccctgatgctccatggtcgttcggctgagacgagcaaatcaagtgagaaggatcagagccactccatcggtactgtgtcaatgacacaattgcatggaagatag</cdnaseq>

Protein Sequence

<aaseq>MAASPPPPPRPLLLLLPLLLVWGVVVAAAAATDTLRQGESLTGA ATLVSSPSGVFEVGFFAPDPKLPSRLYLGIWYRSISPRTVVWVANRAAPATAPSPSLT LAANGELRVLDGSAADADAPLLWRSNASTQSAPRGGYKAVIQDTGSLEVRSDDGTLWD SFWHPSDTMLSGMRITVRTPGRGPSEPMRFTSWTSETDPSPGRYALGLDPANSGQAYI WRDGNVTIWRSGQWTGQNFVGIPWRPLYLYGFKPANDANLGAYYTYTASNTSLQRFVV MPNGTDICYMVKKSAQEWETVWMQPSNECEYYATCGANAKCTAMQDGKAKCTCLKGFQ PKLLDQWNMGNWSQGCVRSPPLGCQVNQTGDGFLSIPNIKWPDFSYWPSTVQDENGCM NACLSNCSCGAYVYMTTIGCLLWGSDLIDMYQFQSGGYTLNLKLPASELRSHHAVWKI ATIVSAVVLFVLLACLFLWWKRGRNIKDVMHKSWRSMHTSTRSQQNSGMLDISQSIPF EDDTEDGKSHELKVYSFDRIKAATCNFSDSNKLGAGGFGPVYMGKLPGGEEVAVKRLC RKSGQGLEEFKNEVILIAKLQHRNLVRLLGCCIQGEEKILVYEYMPNKSLDAFLFNPE KQGLLDWRKRFDIIEGIARGLLYLHRDSRLRVVHRDLKASNILLDKDMNPKISDFGMA RMFGGDQNQFNTNRVVGTFGYMSPEYAMEGIFSVKSDIYSFGVLMLEIITGKRALSFH GQQDSLNIAGFAWRQWNEDKGEELIDPLIRASCSLRQVLRCIHIALLCVQDHAQERPD IPAVILMLSSDSSSLPMPRPPTLMLHGRSAETSKSSEKDQSHSIGTVSMTQLHGR</aaseq>

Gene Sequence

<dnaseqindica>5968..6276#5724..5874#5409..5646#5115..5325#4785..5005#4097..4204#3652..3981#2744..3054#143..825#agcgccgccactaaacaaatccgcgacacaatcctccgccattaaactctctctctcctctcgacaccacatcacagcagtgaggtggttgttggcggaggagggaggctggctgctgctgctgctgccgccgcctccatccatggcggcttctcctcctcctcctcctcgtcccctgctgctgcttctcccgttgctgctcgtttggggcgtggtggttgcggcggcggcggcgacggatacgttgaggcagggggagtcgctgacgggggcggcgacgctggtgtcgtcgccgtcgggggtgttcgaggtggggttcttcgcgccggacccgaagctgccgtcgcggctctacctcggcatctggtaccgcagcatctcgccgagaaccgtcgtctgggtcgccaaccgcgccgcgccggccaccgcgccgtcgccgtcgctcacgctcgcggccaacggcgagctccgcgtgctcgacggctccgccgcggacgcggacgcgccgctcttgtggaggtcgaacgcgtccacgcagtccgcgccacgcggcgggtacaaggccgtcatccaggacaccggcagcctcgaggtgcgcagcgacgacggcacgctgtgggacagcttctggcacccgtcggacaccatgctgtccgggatgcgcatcaccgtgcgcacgcccgggaggggcccctccgagccgatgcgcttcacgtcgtggaccagcgagacggacccctcgccggggcggtacgcgctcggcctcgacccggccaactccggccaggcctacatctggagagatggcaatgtcaccatttggaggtcagtttctcgattcgctctggttgctagtatcatttgattcggatttgattgatactaatatcttaagactgtagggcctagaataatgaatagttcaaatcaaatctgacccgcaattatgcttagaataaaatttggggttattaatgtatacttcaacttcaagtggttgctgttggagtgttggtcataggaatttcttaagttcgagtacagttttacacaaatctaagcatcttccttgttattcacggggcaatccaagatctatatttaatttttgaaaatattgctcagcttcaattaatgttgcttggtaggtagcctagtttggtttggctttggttgctcatcctctattatactttggagtttggatcacaagttttgagcatctccttttcatgggtgatgtaaacatcgttttcattgtgatgtggaatggttggtgaggggctatcagaaacattaagtttagcaattggaatgggcaaaatagccatgtggggaacgttacctcctacttgcaatccatcaataatcattactcactagttcatgattagtgctagtatattggtaggctattctaacagatttaacctctgttttttgacacactgaatgttttctgcacttaagttttatgagtatggtgttaagttacaaataagacatttagcccggtcgcaaataagttttgtaattgacatgacctccaaacatagctctgatgaatgatttctgttgcatcgcgacctgtcaggtgcggttttaaatatctttttcagtcaaatctatgcttatcactttcatatgtttggtttaaatttccacaaaacatattgaggtccaaatttaaaggaagctagaaacaacatgcctaaacatcatttattttttactggagggagtagtaattgctcccttttttttatgctgttttagaaagttatttttgttatcaaattgtatcggtcttctagttagcgtttacccaaataggtcctagtaatagtcattgtaagctgaaaattggaattgaatgagcaagataggtggaggctattgattgcagcttagaacatttaagagggcgaacatgtcaaaacatgggcattgcttagctccttggtttgttgatatctaaaaagaacagagggaatacatgtgagcagaccgtttgagaaaactctttcaacaaacagatttgtattttttctctctttctccatgaagtaatccaataaatccagtcactaacaaaaagaaaaaaaaaatcctctatggcactcttgagtttgtgaaatgtaggttcagcttcttactttgtgtattgtcttatctgccaatggaaacatatgaacactaacttttggtatggagaaggaaaagaccatatatccttgttctttaccatttccactgtccaaatggagataagctcaagcaatagaaacctggagtcatgtgctgtattttggacagtgaaagtagcatgtaacaagagtatattacccccccccccccaactgttaagtgttaacctctgaaagtggcgtaaaacatcagtacaatatgtttctggtgacaaaatactactataataaataaactcaggtgtcagattcaagtgtgtcatataagaaaattttccttttcggtattgcatggcatgcttcgatgaattctcagttcctgcaagctgaacatcagcctgatggatccacagaaaacaagtcaatacctatgaaatatgtaatgcaagtgtgcaaaagctagtattcaagatgaaatgggatttgaattgtgttattgaaataattaatgacaacttaactgatttaatatataatatcagaaaaaatggattctcaatttaagatatgccataactttaattgactctttacaggtcaggacaatggactgggcagaattttgtgggcattccttggagaccactgtacttgtatgggttcaagccagcaaatgatgcaaacttaggtgcatactacacttacactgcatcaaacacatctctgcaaaggtttgttgttatgccaaatggtacagacatctgttacatggttaagaagtcagcacaagagtgggagactgtctggatgcaaccatcaaatgagtgtgagtactatgctacgtgtggcgcaaatgctaaatgcactgccatgcaagatggcaaggcaaaatgtacctgcctaaaaggtatctccttgaccattagtttagaaattgaattccttttgtagtagtgagagaagtgtaactgacatcaaatttggtttgtgtttatactgatggtcatagagattaaggccattttttgagtccaggaattcatattaatcttgtggaaattatgtcagttacttaactattaattcattccaaagtcaaaacattagttcttcctgctcctttatctgaaagtttcttatataacttcacagttccacatgctatagttgcggcgtggacatagattcttccaatcatggtggccataacactaccaaaggaaaagaaaactgaccttcagtcgttgtatgtaaacttttgaaaatgttaaagttgagtggttactttaagggattttatcaacccagtcaaaaattgttgtcttaactgaatgggtgttcttccttttccgttcacccacagtaaaacacattagcaccctaaaatacaaatatgtggtgtgctatctctggttgctttgataccttcactatcatttttacatgcttacaaacaaatactggctgcaacagtgggtttaaatttttttgctgacttctataggatttcagccaaagttgcttgatcagtggaatatgggaaattggagtcaaggttgtgtcaggagcccacctttgggttgtcaggtgaaccaaactggggatggatttctttctatcccaaacatcaagtggccggatttctcatactggccatctacggtgcaagatgagaatggatgcatgaatgcttgcctcagcaactgctcatgtggtgcctatgtctacatgactacaataggatgtctactgtggggtagcgacctgatcgacatgtaccagtttcagagtgggggatataccctaaacctcaaacttcctgcttctgagttacgtaagtgatgatgattatctaatacaagtacacaacagtgtacatatgcacttccatatctcctcgcatgaaaaatatgatgtttatgatgacttcagcttcactctattatcaggctcacatcatgcagtttggaaaatagccacaatagtgtctgcagtggtgctatttgttttgctagcttgcctcttcctgtggtggaagcgtgggaggaatatcaaaggtaaggttctgttgcacacatccaaatttagctgaccatgcgatgctagtaatactgtaagtaaatatgtcatcatgctcaggaatgttcccccacaagccttaaaaataagattagaccaacaaaactggacgatttaatgttctaagagaagatagtgggtagggctgaatgtagagctgtcttgttcaacgtgtaactaatcatgacaagaccatgtcttgtgtaatgcgactccgggaagatattgtcattgtcagcatttgaaagtattctaatgtcatggtaacatagatcatgcatttttactccacagagtgttgattcactgattgaaacatagtaaatgttcacttctatgagttctcatacaaaaatcttttgtatagtgatcatgtatttttgaagtgatgattatttcttagtagttggtattatggttaagtatcccagttagattcatggtctgtcatgcttgccaagagatttgcacaaaccgttaaatttgctattcatctttcaacatgaattcatggaggtatgcataatattaacttataactgccattttatggagcagatgtgatgcacaaaagttggaggtcaatgcatacgtctacacgatctcagcagaatagtggtatgctggacatctcgcagtcgattccttttgaagacgacacagaggatggaaaaagtcatgaactcaaagtatactcctttgaccggataaaagctgccacttgtaatttcagtgactccaacaagcttggagcaggaggatttggtcctgtatatatggtacgttttattttttgatgaaatatatggtatgtttttatatcatagatgagtatattttttatgtaatattgagatcaggtttatcatgtcaatgaaatgactgtagggaaaattacctgggggagaagaagtagccgttaagaggctttgtaggaaatcaggtcaaggccttgaggagttcaagaatgaggtcatacttatcgcaaaactgcagcatcgcaatcttgtgagactattaggatgctgcatacagggagaagagaagatcttggtgtacgagtacatgcctaacaaaagtctagatgcattcctcttcagtacgtaccatttccgcacatcaccattccctttatgaatgagcagatgaattgattgaattgtgtttactgtggatgaatagatcctgagaagcaagggctcctagactggaggaaacggtttgatataattgaagggattgctcgagggctgttatatctccaccgggactcaaggttgcgagttgttcatcgtgatctcaaggccagcaacattctcctggacaaagacatgaaccccaagatttcagattttggaatggccaggatgtttggaggggatcaaaaccaattcaacacgaatcgtgtggttggaacattgtatgcgtaattcagaatatacctcagaatatctctaacattgccactgttatgataagttgatttcctttttgcagtggctatatgtcgccggaatatgctatggaaggcattttctcagtaaagtccgatatttatagctttggagttctaatgttggagatcatcacaggaaagagggctttgagctttcatggtcaacaagactccctaaacattgcaggatttgtaagcacaagcctgtctcccttatataccgaacttatcctaatattttgttttttttaatcttcatggcttgattttacaacaatttttcaggcatggcgacaatggaatgaagacaagggcgaggaactgattgatccattgataagagcatcgtgctcacttcgacaagtcttgagatgcatccacattgcattgctatgtgttcaagatcatgcgcaagaacgtcctgatatccctgcggtcatactgatgttgagcagcgacagctccagccttcccatgccaagaccgcctaccctgatgctccatggtcgttcggctgagacgagcaaatcaagtgagaaggatcagagccactccatcggtactgtgtcaatgacacaattgcatggaagatagcttagcagggacaacattgtgaaaatcattaacagcttggttgttctttttttccccttttctctgctattacaaaggtattgtcttgtgtagattagtattcaggggccttcactcatgctaatttgtaaaataacatttatgtcatatataaaatggcatgtaagttttgtgaaatgaagcatgtgtagatgattgtggttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0551300, RefSeq:Os07g0551300