Difference between revisions of "Os07g0582100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0582100| Description = HAT dimerisation domain containing protein| Version = NM_001066642.1 GI:115473016 GeneID:4343727| Length = 3067 bp| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0582100|
 
GeneName = Os07g0582100|

Revision as of 20:39, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0582100

Description

HAT dimerisation domain containing protein

Version

NM_001066642.1 GI:115473016 GeneID:4343727

Length

3067 bp

Definition

Oryza sativa Japonica Group Os07g0582100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24226293..24229359

Sequence Coding Region

24226293..24226520,24226883..24227170,24227859..24228737,24229270..24229359

Expression

GEO Profiles:Os07g0582100

Genome Context

<gbrowseImage1> name=NC_008400:24226293..24229359 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24226293..24229359 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgacaatcctacctccgtcaactacgagttgaggactatggggatgcacagtgatgacgatgatgatgtggaggaggatcgtgtggaggtgttcggcaatacctccgacatcccgatccatgtgaatgtcgatgatgacgacccgccggtcgacgacagtggcaatgggatgccgactggctctagtgcgacttgtaccaacaagaagaccaaaacctccaagacaaactactaccagagatctaccagagatttttacaagatgcttaaggatcgtcgttctgttattatcgatcgtctcaattctgctagctctattgctttgacatctgatatatggtctggtcatgctaaggaagattatttgagtgttgtagctcactttgttaattctgattggcaattagaaaagagggtcttgggtcttaggctcattgatgagtcacatactggtgctaatattgctgagcgtgtgattgctgttgctgaagaatatggtattactgataagattgctggacatctaaacacatatggcaatgttcaaaaccttgcaaatgttgttggtcccatgaaaactaagtttatgaactactggtctaaaattccaattctttattcatttgcatttatcttggaccctagggccaagattagggggtttagtaaagtgcttcagattatggctcaactcattggtgatgattactctgcttatttaacaactgttagggcttcattgtctgatacttttgctaagtatgaaagaaagtttggttctgttggattgcgtagttccactattctaggcccttccactagtaagaaaaggactgcatgggggaagatttttggttctggtaatgcaggtgccagtctaggtgctgggcttggtgctggtaatgcaggtgctagtccaggtgctgggcttggtgctggtaatgctggtgtcagtccaggtgctgggcttggtgctggttcattatttaggatgacatctgctactgctttgcttcaggcagcttcttcaactgctaatctcaattcttctgaactgtctgcatatcttgacagtgacactgtcaaccaatatgatgatgacttcaatatccttagctggtggcaacaacacaaactaacttatcctgttctttcaatcttagctaaagatgttatgactgttcctatttctactatatcgtccgagtctacttttagcttaactggcaggatcatcgaggaccgtcggcggcgtctaaaccctaggctggtggaaattctagcagtgatcaaggactgggagctagcagatgcaaaaggtcagcatactactgagaatgtggagcttcaaaatgcttatgagaatatgtatcttgatgatgaaattgatggcgtgcctgggccggcacgggcacgatgggctggccgggccgtcgggccagcccggcacggcccgaggctactggggccgtggttgtag</cdnaseq>

Protein Sequence

<aaseq>MDDNPTSVNYELRTMGMHSDDDDDVEEDRVEVFGNTSDIPIHVN VDDDDPPVDDSGNGMPTGSSATCTNKKTKTSKTNYYQRSTRDFYKMLKDRRSVIIDRL NSASSIALTSDIWSGHAKEDYLSVVAHFVNSDWQLEKRVLGLRLIDESHTGANIAERV IAVAEEYGITDKIAGHLNTYGNVQNLANVVGPMKTKFMNYWSKIPILYSFAFILDPRA KIRGFSKVLQIMAQLIGDDYSAYLTTVRASLSDTFAKYERKFGSVGLRSSTILGPSTS KKRTAWGKIFGSGNAGASLGAGLGAGNAGASPGAGLGAGNAGVSPGAGLGAGSLFRMT SATALLQAASSTANLNSSELSAYLDSDTVNQYDDDFNILSWWQQHKLTYPVLSILAKD VMTVPISTISSESTFSLTGRIIEDRRRRLNPRLVEILAVIKDWELADAKGQHTTENVE LQNAYENMYLDDEIDGVPGPARARWAGRAVGPARHGPRLLGPWL</aaseq>

Gene Sequence

<dnaseqindica>1..228#591..878#1567..2445#2978..3067#atggacgacaatcctacctccgtcaactacgagttgaggactatggggatgcacagtgatgacgatgatgatgtggaggaggatcgtgtggaggtgttcggcaatacctccgacatcccgatccatgtgaatgtcgatgatgacgacccgccggtcgacgacagtggcaatgggatgccgactggctctagtgcgacttgtaccaacaagaagaccaaaacctccaaggtatgggatgactttgaggaactttatgaaacgaccattggaaatagggttcaagtctctgctaaatgcaattactatcataaaactttgagtgctcgttcttctgctggcactggacatttgcttaggcatattaagtcatgcaaacctagaaagcttgggtctaatgctttgcctcagtccatgcttagatttagtgcagatggttctgttattccatgggaatatagtcctgaagttgctaggtttgaattgtgtagattgattgctagagaggatcttccaatcagttttggtcaatctcctgcttttgtgaactatattaaggctgctcataaccctagatttgttcttgtctctagacaaactactaccagagatctaccagagatttttacaagatgcttaaggatcgtcgttctgttattatcgatcgtctcaattctgctagctctattgctttgacatctgatatatggtctggtcatgctaaggaagattatttgagtgttgtagctcactttgttaattctgattggcaattagaaaagagggtcttgggtcttaggctcattgatgagtcacatactggtgctaatattgctgagcgtgtgattgctgttgctgaagaatatggtattactgataaggttttctctattacattagacaatgcttttgctcattctaaagctatggaaacccttactcttgctctgtctggttatgttggtgatttattttggaaaaattgtaaccatgccattataattttgtaaaatttaagatatgtcatcctgacccacatgtcattgactcgtgtgggtcctacatgtcattgagataccgatggcatatctcaaactttgaaaaattataatggcatggttccaaattacccatttatttttgcatcaacgctgtgcatgtcatatcatcaatttgattgttaaggctggacttgacaagttcaagcccatgctaaatgacattagagctgccatttcattcttgaatgcatctaatcagcgtattgctacatataaaaatgtttgcattgctgcgggttatcgtcctcgtatgtttggtttggacatggatgttagatggaattcaacttatctaatgcttaagcatctcataccacatagggaaccattcatagtatttattagtacacaacatccttttgttaatggccatccattactcacagacttacattgggcatgtgctgaatctgttttgtgtttccttgaacaattttatgattcaactgttgttttgtctggtgtttattatccaacatctccattaatcatgtatcacattttaaagattgctggacatctaaacacatatggcaatgttcaaaaccttgcaaatgttgttggtcccatgaaaactaagtttatgaactactggtctaaaattccaattctttattcatttgcatttatcttggaccctagggccaagattagggggtttagtaaagtgcttcagattatggctcaactcattggtgatgattactctgcttatttaacaactgttagggcttcattgtctgatacttttgctaagtatgaaagaaagtttggttctgttggattgcgtagttccactattctaggcccttccactagtaagaaaaggactgcatgggggaagatttttggttctggtaatgcaggtgccagtctaggtgctgggcttggtgctggtaatgcaggtgctagtccaggtgctgggcttggtgctggtaatgctggtgtcagtccaggtgctgggcttggtgctggttcattatttaggatgacatctgctactgctttgcttcaggcagcttcttcaactgctaatctcaattcttctgaactgtctgcatatcttgacagtgacactgtcaaccaatatgatgatgacttcaatatccttagctggtggcaacaacacaaactaacttatcctgttctttcaatcttagctaaagatgttatgactgttcctatttctactatatcgtccgagtctacttttagcttaactggcaggatcatcgaggaccgtcggcggcgtctaaaccctaggctggtggaaattctagcagtgatcaaggactgggagctagcagatgcaaaaggtcagcatactactgagaatgtggagcttcaaaatgcttatgagaatatgtatcttgatgatgaaattgatgtaaacccttgaactagatgattgtaattgatgtgaacattttagctgtgggttgtactcttttcctttctagggttttctcacgaggtgtgagtttttacctataaaggtttttaacgaggcagccattgcacaatcacagcttatataaaccccttttatattctaactttctgaggtttgtttatgattatgtgatttctgtaagtctgattgtctgagactctgagatggacttgatggaaaatagtagatgacttgatgtatgcatttgatgaattgatttgaactgattgtaaatctgtgagactgtgacttgatgaattggtgacttgaataattgttcatttgtttgtaaatctgtgattgtaaatctgtgacttgatatatgcatgatttgatgaactggtgacttgatgaattgtttgtgattctttgacttatttgatgaattacatgtgaatttcttgaatttgaggtgttatgtcaatttgttgtgttgaattgaacttttgaaggggttttttgccagggcgtgcctgggccggcacgggcacgatgggctggccgggccgtcgggccagcccggcacggcccgaggctactggggccgtggttgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0582100, RefSeq:Os07g0582100