Difference between revisions of "BGIOSGA017401"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA017401| Description = cDNA clone:J033115O13, full insert sequencecDNA| Definition = Oryza sativa Indica Group BGIOSGA017401, complete gene.|...")
 
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA017401|
 
GeneName = BGIOSGA017401|

Latest revision as of 16:14, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017401

Description

cDNA clone:J033115O13, full insert sequencecDNA

Definition

Oryza sativa Indica Group BGIOSGA017401, complete gene.

LocusTag

H0814G11.18

Ensembl Transcript ID

BGIOSGA017401-TA

Ensembl Protein ID

BGIOSGA017401-PA

Length

2148

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34454386..34456533

Sequence Coding Region

34454386..34456533

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34454386..34456533 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34454386..34456533 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGATGCAGATGCAGTCGAGGTCTCGCATTCGCGGCCGCGACCCGCCCCCGGCCTCCTCGGGAGGACGATACCGCCGACGATCGCCCTCCCCGCGCCGCCACCACCGCGCTCCCCCCTCCAACCCCAACCCGCACAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCACGAGGACAGCCTCCCTCTCCATGTCCATCTCCCACCCCCACCCGACGCCCTACTCACCGCCGCCGCCGACCGCCGCTCCCGCGCTGACGTCCTTCTCGAGGCCGGCCGCCTCGCCGCCCGCTACCTCGTCGCCCAGGGCGTCATCCCCGAGCACCGTCTCCGCGCCAGGGAGGACCCCCTCCCTGCCGCCAGGAACCATGACGTCGACGACCCCAGGTCCCGCCGGAATGCCGACTTCCCCCGCGACAGAGGGGACGATGACAGGCTATCCCGTAGATCCGGCTGGGACAGGAGGAGCAACAGCTTTGACAGCAGGCGCAAGTACAATGATGCCGCCTCAGCCGATCGGAGTGCCCGCCGGAGCCACGACTACGACGACCAAAGGAGACCAACCATGTCACGCTCCTATTCACAAAACGACCGCCGTGTCTCCAGTGATAGCAGGCTGGATCGAAGACGGAGGAGCAGGAGCAGAAGCAGGAGCAGAAGCAGAAGCAGGAGCAGGAGCAGAACCAGGACAAGGAGCTATAACTATGGCAGCCGGAGGGATTCAGATTGGCGAGCATCTGGCGCCGATTTGGATCATTCCAAGGTGCCAGAGCCTGGCATTGTCCGTGACGGTGATGCTGATGTGGGATACGGTGATGCTGATGATGTGCCAAGAGATCTCAAGGCACCTCCCCGTTCAGTGGTTGTTATGGGGACAAAAGAGAGTGCCAGCCAAGCTGCAGCCAATGAAGACACAGCAGAGGTGGAGTCAGAGATCATAGAGGTCGATCAAGCTCAAGATATATATGGGGATGACGATGACGATGGTGACGATGCTGTTGCTGCCTTCAATTATCCAAGCGTTGCTGAAATAAATGTTACCCAATACAAGCTGTCCAATTCCAACGAGGATGTTGTTCATCCGTCACAGTCTGATGAGGAACCACTGCATAGGCAGTCCCAGTTCAGCGATGCTGAGGAGGGCATGGAGGGTCCGATCTCTCCCAGGGATTCATGCTTGGTAGAACCAGTGGCCGAGGAAGTCAGAGATGGAATGGAGGCTCCGCAGAGTGAAGTTGAAACTGATAACGCAGACCTTAGCAAAGATGAACAAGACCTGCCAGCTTGGTATGGGATTTTTGACCTCAATGTTGTGGAATCTCAAGAAAACTGTGAAATGGTTGAGATTTCCAATGATTCGCCTTTAGATAATGGTCGTGACTCTGTTCCTGATCAAGTTGGTCAGATGAGCCAAGGAGCAAACTGCGTCACTTCAGGAACTCAAGGTCAAGATGAACATGCATTTGACAACCACCAGTCGGAGGATGAACAAGTGCCTCTAAATCAAAGAAATGGTACGGATGATTTTAACAATGAACAAGGGGTTGGAAATCAGACAGGTGATGAACATGGACAGGATAATCACCAGTTGGAGGATGACCAGATGCATATAAATCATGTCATGGATGTGCATACTTTAGATAACGGCCTTATGAACGGTGAGGAAATGCTTCTAAAGCGGTGTGCAGATGAGCACACGGATCATGGACACCTGGTGGAAACTGAAGAAATGCTTCTGAATCAGGGGCAGAGTACCTCTGTACAAGTGTTGGAAAATTATAATATGAATGGAGAACAGGTGCAGCTCAATCATGATGCTGATGAACATTCAGGCGATGATCGCCCAATAAAGAATGAGCAAATGCTTTTGAATCATGTTATGGGTGTGCATGATTTGGATAATCATGACCAGAACAGTGAACAAATGCTTCTAAACAATGGCGCTGGTAAACAGGCTGCAGATAGTGCTCAGTTACAGGAAGACCAGATGCTTCTAGACCAGGCTGCAGATGGACAAGCTACGCTTCACGGTCAGAGCATTGGCCAAATGATTCCTGTAATCAATCTGGAAGATGATTATGAAGAGCAGTCTGATACCATAGAGTTTTCAGAATCCAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MQMQMQSRSRIRGRDPPPASSGGRYRRRSPSPRRHHRAPPSNPNPHRXXXXXXXXXXXXXXXXXHHEDSLPLHVHLPPPPDALLTAAADRRSRADVLLEAGRLAARYLVAQGVIPEHRLRAREDPLPAARNHDVDDPRSRRNADFPRDRGDDDRLSRRSGWDRRSNSFDSRRKYNDAASADRSARRSHDYDDQRRPTMSRSYSQNDRRVSSDSRLDRRRRSRSRSRSRSRSRSRSRTRTRSYNYGSRRDSDWRASGADLDHSKVPEPGIVRDGDADVGYGDADDVPRDLKAPPRSVVVMGTKESASQAAANEDTAEVESEIIEVDQAQDIYGDDDDDGDDAVAAFNYPSVAEINVTQYKLSNSNEDVVHPSQSDEEPLHRQSQFSDAEEGMEGPISPRDSCLVEPVAEEVRDGMEAPQSEVETDNADLSKDEQDLPAWYGIFDLNVVESQENCEMVEISNDSPLDNGRDSVPDQVGQMSQGANCVTSGTQGQDEHAFDNHQSEDEQVPLNQRNGTDDFNNEQGVGNQTGDEHGQDNHQLEDDQMHINHVMDVHTLDNGLMNGEEMLLKRCADEHTDHGHLVETEEMLLNQGQSTSVQVLENYNMNGEQVQLNHDADEHSGDDRPIKNEQMLLNHVMGVHDLDNHDQNSEQMLLNNGAGKQAADSAQLQEDQMLLDQAADGQATLHGQSIGQMIPVINLEDDYEEQSDTIEFSESK</aaseq>

Gene Sequence

<dnaseqindica>1..2148#ATGCAGATGCAGATGCAGTCGAGGTCTCGCATTCGCGGCCGCGACCCGCCCCCGGCCTCCTCGGGAGGACGATACCGCCGACGATCGCCCTCCCCGCGCCGCCACCACCGCGCTCCCCCCTCCAACCCCAACCCGCACAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCACGAGGACAGCCTCCCTCTCCATGTCCATCTCCCACCCCCACCCGACGCCCTACTCACCGCCGCCGCCGACCGCCGCTCCCGCGCTGACGTCCTTCTCGAGGCCGGCCGCCTCGCCGCCCGCTACCTCGTCGCCCAGGGCGTCATCCCCGAGCACCGTCTCCGCGCCAGGGAGGACCCCCTCCCTGCCGCCAGGAACCATGACGTCGACGACCCCAGGTCCCGCCGGAATGCCGACTTCCCCCGCGACAGAGGGGACGATGACAGGCTATCCCGTAGATCCGGCTGGGACAGGAGGAGCAACAGCTTTGACAGCAGGCGCAAGTACAATGATGCCGCCTCAGCCGATCGGAGTGCCCGCCGGAGCCACGACTACGACGACCAAAGGAGACCAACCATGTCACGCTCCTATTCACAAAACGACCGCCGTGTCTCCAGTGATAGCAGGCTGGATCGAAGACGGAGGAGCAGGAGCAGAAGCAGGAGCAGAAGCAGAAGCAGGAGCAGGAGCAGAACCAGGACAAGGAGCTATAACTATGGCAGCCGGAGGGATTCAGATTGGCGAGCATCTGGCGCCGATTTGGATCATTCCAAGGTGCCAGAGCCTGGCATTGTCCGTGACGGTGATGCTGATGTGGGATACGGTGATGCTGATGATGTGCCAAGAGATCTCAAGGCACCTCCCCGTTCAGTGGTTGTTATGGGGACAAAAGAGAGTGCCAGCCAAGCTGCAGCCAATGAAGACACAGCAGAGGTGGAGTCAGAGATCATAGAGGTCGATCAAGCTCAAGATATATATGGGGATGACGATGACGATGGTGACGATGCTGTTGCTGCCTTCAATTATCCAAGCGTTGCTGAAATAAATGTTACCCAATACAAGCTGTCCAATTCCAACGAGGATGTTGTTCATCCGTCACAGTCTGATGAGGAACCACTGCATAGGCAGTCCCAGTTCAGCGATGCTGAGGAGGGCATGGAGGGTCCGATCTCTCCCAGGGATTCATGCTTGGTAGAACCAGTGGCCGAGGAAGTCAGAGATGGAATGGAGGCTCCGCAGAGTGAAGTTGAAACTGATAACGCAGACCTTAGCAAAGATGAACAAGACCTGCCAGCTTGGTATGGGATTTTTGACCTCAATGTTGTGGAATCTCAAGAAAACTGTGAAATGGTTGAGATTTCCAATGATTCGCCTTTAGATAATGGTCGTGACTCTGTTCCTGATCAAGTTGGTCAGATGAGCCAAGGAGCAAACTGCGTCACTTCAGGAACTCAAGGTCAAGATGAACATGCATTTGACAACCACCAGTCGGAGGATGAACAAGTGCCTCTAAATCAAAGAAATGGTACGGATGATTTTAACAATGAACAAGGGGTTGGAAATCAGACAGGTGATGAACATGGACAGGATAATCACCAGTTGGAGGATGACCAGATGCATATAAATCATGTCATGGATGTGCATACTTTAGATAACGGCCTTATGAACGGTGAGGAAATGCTTCTAAAGCGGTGTGCAGATGAGCACACGGATCATGGACACCTGGTGGAAACTGAAGAAATGCTTCTGAATCAGGGGCAGAGTACCTCTGTACAAGTGTTGGAAAATTATAATATGAATGGAGAACAGGTGCAGCTCAATCATGATGCTGATGAACATTCAGGCGATGATCGCCCAATAAAGAATGAGCAAATGCTTTTGAATCATGTTATGGGTGTGCATGATTTGGATAATCATGACCAGAACAGTGAACAAATGCTTCTAAACAATGGCGCTGGTAAACAGGCTGCAGATAGTGCTCAGTTACAGGAAGACCAGATGCTTCTAGACCAGGCTGCAGATGGACAAGCTACGCTTCACGGTCAGAGCATTGGCCAAATGATTCCTGTAATCAATCTGGAAGATGATTATGAAGAGCAGTCTGATACCATAGAGTTTTCAGAATCCAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017401