Difference between revisions of "BGIOSGA017541"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA017541| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017541, complete gene.| tag = OSJNBA0...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA017541|
 
GeneName = BGIOSGA017541|

Revision as of 16:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017541

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017541, complete gene.

LocusTag

OSJNBA0040E06.5

Ensembl Transcript ID

BGIOSGA017541-TA

Ensembl Protein ID

BGIOSGA017541-PA

Length

3225

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29652186..29655410

Sequence Coding Region

29654995..29655410,29654790..29654912,29653973..29654144,29653437..29653474,29653106..29653304
,29652867..29653019,29652344..29652478,29652186..29652263

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29652186..29655410 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29652186..29655410 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCTCCTCCTCTGCCGCCGCCTGCTTCCTCTCCCCGTCCCCTCCTCCCCCCCCGCGCCACCATTCCATCAAACACCTGGCGTGCGCCGCCTCCAGGTCGCCGTCGCCGGGGCCCTCCTCCTCCCGCTCCCTCGCCCTCCCTTCGCCTTCGGCTTCGGCTTCTCCGTCGCCGTGGCCGCGGCGGCTCCGCGACCTGCTCCCCGACGAGACCGGCCGGATCCTGTCGTCCGCCACGGGCTCCCTCATCGTCGCCCTCGCCTCGGCCGCGCTGATCCTCGGCGACGCCGGCTCCGCCTCCGCGTTCGTCGTCGCCACGCCGCGGAAGCTGCAGGCCGACGAGCTCGCCACCGTGCGCCTCTTCCAGGAGAACACGCCCTCCGTCGTCTACATTACCAACCTCGCCGTGAGGCAGGATGCCTTCACGCTGGACGTGCTCGAGGTGCCGCAGGGGTCCGGGTCGGGGTTCGTCTGGGACAAGAGCGGCCACATAGTCACCAATTTCCATGTCATCCGTGGCGCGTCAGATCTCAGGGTCACACTTGCTGATCAGACAGTGTATGAAGCGCAAGTTGTTGGATTTGACCAGGATAAGGATGTTGCTGTTTTGCGTATTAAAGCACCAACAGATAAATTAAGACCTATACCAGTTGGTGTGTCGGCAGACTTACTGGTCGGTCAGAAAGTATTTGCCATAGGGAACCCGTTTGGTCTTGACCACACTCTTACTACAGGAGTCATCAGTGGATTGCGTAGAGAAATCAGTTCAGCTGCAACAGGACGCCCTATACAGGATGTGATACAAACTGATGCTGCTATCAATCCTGGTAACAGTGGTGGGCCACTTCTTGATAGCTCAGGAAACTTGATAGGTGTAAACACTGCTATATACTCACCTTCAGGAGCATCATCCGGTGTTGGCTTTTCCATTCCAGTTGATACAGTTGGTGGTATTGTGGATCAGCTTATAAAGTTTGGTAAAGTAACAAGACCTATTCTAGGGATAAAATTTGCTCCAGATCAATCTGTAGAGCAGCTTGGATTAAGTGGAGTGCTTGTCTTGGATGCTCCTCCAAATGGACCAGCAGGCAAAGCGGGTCTGCAATCGACCAAGCGGGATTCCTATGGTCGGCTTATCCTAGGGGACATAATTACTTCTGTGAATGGAACAAAGGTAACAAATGGAAGCGACTTGTATAGGATTCTGGATCAGTGTAAAGTTGGAGAGAAGGTGACTGTGGAAGTATTGCGTGGAGATCAAAAGGAGAAGATACCCGTGATTCTTGAACCAAAGCCAGATGAATCATAA</cdnaseq>

Protein Sequence

<aaseq>MAAASSSAAACFLSPSPPPPPRHHSIKHLACAASRSPSPGPSSSRSLALPSPSASASPSPWPRRLRDLLPDETGRILSSATGSLIVALASAALILGDAGSASAFVVATPRKLQADELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKSGHIVTNFHVIRGASDLRVTLADQTVYEAQVVGFDQDKDVAVLRIKAPTDKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGNLIGVNTAIYSPSGASSGVGFSIPVDTVGGIVDQLIKFGKVTRPILGIKFAPDQSVEQLGLSGVLVLDAPPNGPAGKAGLQSTKRDSYGRLILGDIITSVNGTKVTNGSDLYRILDQCKVGEKVTVEVLRGDQKEKIPVILEPKPDES</aaseq>

Gene Sequence

<dnaseqindica>1..416#499..621#1267..1438#1937..1974#2107..2305#2392..2544#2933..3067#3148..3225#ATGGCCGCCGCCTCCTCCTCTGCCGCCGCCTGCTTCCTCTCCCCGTCCCCTCCTCCCCCCCCGCGCCACCATTCCATCAAACACCTGGCGTGCGCCGCCTCCAGGTCGCCGTCGCCGGGGCCCTCCTCCTCCCGCTCCCTCGCCCTCCCTTCGCCTTCGGCTTCGGCTTCTCCGTCGCCGTGGCCGCGGCGGCTCCGCGACCTGCTCCCCGACGAGACCGGCCGGATCCTGTCGTCCGCCACGGGCTCCCTCATCGTCGCCCTCGCCTCGGCCGCGCTGATCCTCGGCGACGCCGGCTCCGCCTCCGCGTTCGTCGTCGCCACGCCGCGGAAGCTGCAGGCCGACGAGCTCGCCACCGTGCGCCTCTTCCAGGAGAACACGCCCTCCGTCGTCTACATTACCAACCTCGCCGTGAGGTAGAAATCCGCCGCGTTCGTCCTCCTCGGCTTGCCTTTTTTTTTTTTTCACGCGTACTGATGCGAATTCGGGTTGCTATAGGCAGGATGCCTTCACGCTGGACGTGCTCGAGGTGCCGCAGGGGTCCGGGTCGGGGTTCGTCTGGGACAAGAGCGGCCACATAGTCACCAATTTCCATGTCATCCGTGGCGCGTCAGATCTCAGGTTTGTTAAAATGACATGCTGCTGTCGCCCACTTAGAGCTGAATTCGAATCATACTTCACAATTCTGATAGATTTTTTTGGGTGCATGAAGATTTGTATAGGAGTGTAAATTGCTCTAGACTTCTAGAACTTGAAATGGATGGAGTAATGCAAATAGATGTTGGTTAGCTGCAGTAATGTGGTTACAGTGACAACTGACAACGGTTCAGTGAACTGTAAACACTTCCTACTAGTGACTCATTATTCAATGGCTTCCTTTTTCTTAGTTTAATATGTTCAAAGGTGCTATGATATAGATTAGTCATAGTTTCTGACAGGATTGTGTGTTTGAAGCTTTAAAACGATTATATTTTGCATATCATTTTCATTATGTACTTAAATGCTACACTTGAGTATTTGGTGCACAATAATTCATTCCCGAGCCCAACAATAACTTGCGTTTTGGTTTCTTCTAAGCCGCATATACTAGTATGCTGTGTACACTGTTCTGCTAATGCTACATGGTGCCAACTTATTGACAATGCATTATTGCATATAGAGCTAAAACATCCATCCATCTAAGATACTGTTTTGATGAATTCTTATGACATAATAACCTCCAACGGTATCATTGCGAAGTGAAGTTACCACGCTAGTTTTATGCAGGGTCACACTTGCTGATCAGACAGTGTATGAAGCGCAAGTTGTTGGATTTGACCAGGATAAGGATGTTGCTGTTTTGCGTATTAAAGCACCAACAGATAAATTAAGACCTATACCAGTTGGTGTGTCGGCAGACTTACTGGTCGGTCAGAAAGTATTTGCCATAGGGAACCCGGTGAGTGTTTCTTACACCAACTGTTCGGTGTATTACCCATTCATGACAACTGGCTCATAAGCTTAATAAAATGTATTCTAACATAGTCTCAAAAAAACACTATCCAGTTCTTTACTTGTGATGTGCACCCCTGAATAATTTATTTCCATAGTTTCAATGTACTTTTCTGTTCAGAGCTGAAACAACCTTAGAAATCCCCCTAGCTGTTCATGAATATGTCTGACATTGTAATGAAAATACAATATATGCTAGAGAATATTGTACACAAAAAAATACAATTAATCACTATGCAAACAACCAATATATCAAAATGATCTTATGCCACTAAGACTATGTATCGCGTGTTTTGGTGATATCTTTAGGCTTTTAGCACGTATTGATTCCTGGATAGAAAAATATGCTTACAACACTTGATTATTCTGAGTTATTTTCTATCATGCTTGCATTAACTTACTGATCACTAACAGTCTGTAACATGTTATGTCTATGTTTATGCAGTTTGGTCTTGACCACACTCTTACTACAGGAGTCATCAGGTGTAATGTTGTTTGAGTAAACAGATTCTGTCTTTTGCTGATTCATAATGCAATACATGTCTTTTGCTGATTCATAATGCAATACACTGAGACACCTCTGTTTTGTTTTTCTGTTGACCCCCTTCCCTGCAGTGGATTGCGTAGAGAAATCAGTTCAGCTGCAACAGGACGCCCTATACAGGATGTGATACAAACTGATGCTGCTATCAATCCTGGTAACAGTGGTGGGCCACTTCTTGATAGCTCAGGAAACTTGATAGGTGTAAACACTGCTATATACTCACCTTCAGGAGCATCATCCGGTGTTGGCTTTTCCATTCCAGTTGATACAGTATGCAACTTGACATAAATACAAAACTCAGAGTTTCAGAATTTTTTATTTTCTATTCTATTAACATCTCTTTTGAACACATCCAGGTTGGTGGTATTGTGGATCAGCTTATAAAGTTTGGTAAAGTAACAAGACCTATTCTAGGGATAAAATTTGCTCCAGATCAATCTGTAGAGCAGCTTGGATTAAGTGGAGTGCTTGTCTTGGATGCTCCTCCAAATGGACCAGCAGGCAAAGCGGTATTGTCCATAGATCTTATTTATTGGTTTCCTGTAAATTGCAGTCAGTCTTAAAAGCACTGGTTTTCTTGCACTAGGCATGTTCCAATTACGTGTCAATTTGAGTTTACTGGGAGAACACCTGAGTTATTACTCCATAACATCATATGCTATGTTGATTGATGTCCTCTCGTGTGTTTTCAATCGTCACTAGGACTAAGGACAGCTGAACAGACATAACAGTGATAATTCATTTAGCATAAAGGCTAACCTTATGTGATTGATAGAACAAATCCTTTTTATTGCAGACACTGTATTTTCTTTGAACATGTTCGTGTAATAGAAGACTAGCTGCTTGCTTTGAAAATGACTGGTGCAACTAAAACTTATACATCTTGTTGTATGCTAGGGTCTGCAATCGACCAAGCGGGATTCCTATGGTCGGCTTATCCTAGGGGACATAATTACTTCTGTGAATGGAACAAAGGTAACAAATGGAAGCGACTTGTATAGGATTCTGGATCAGTGTAAAGTTGGAGAGAAGGTAAGCTTTCACACGTTTTTGTAAGGAAGAAATTGCTGTGATTGATAATAGCTCAGGTACTTATGCATATTGTGTTATAGGTGACTGTGGAAGTATTGCGTGGAGATCAAAAGGAGAAGATACCCGTGATTCTTGAACCAAAGCCAGATGAATCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017541