Difference between revisions of "BGIOSGA017782"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA017782| Description = cDNA, clone: J100029H20, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA017782, complete gene.| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA017782|
 
GeneName = BGIOSGA017782|

Revision as of 16:16, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017782

Description

cDNA, clone: J100029H20, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA017782, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA017782-TA

Ensembl Protein ID

BGIOSGA017782-PA

Length

3550

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26053946..26057495

Sequence Coding Region

26057250..26057495,26056513..26056560,26056309..26056368,26055608..26055694,26055405..26055509
,26054647..26054760,26054399..26054499,26054202..26054313,26053946..26054071

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26053946..26057495 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26053946..26057495 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCGGCCGCCGACGGCGAGGGCGGGGGCTACGAGGACGCGTCGGAGTTCGCCGACGCGGAGACGGGCGGGGGAGAGGTGGTGCGGGGGGAGGGGGAGGGGGAGAGGGAGAGGAAGGAGCTGCCCGAGGAGCTCGCCAAGGGGGTGGTGTGCCTCGAGTGCGAGACGTCGCCCGAGGCGGAGGCGGCGGGGGCGGGCGGGACCTGCCGCGTCTACGTCGTCGGCACCGCCCATGTTTCACAGGAATCATGTGACCAAGTAAAAGCCGTCATCGACTACCTGAAACCTCAGGCTGTTTTCTTGGAGCTCTGTGCCAGCAGAGTCGCCATTCTGACACCACAAAACCTTCAGGTTCCTACCATGAACGAAATGATTGACATGTGGAAGAAAAAGAAGATGAACACTTTTGGAATACTCTACAGCTGGTTTCTTGCAAAGGTTGCTAGCCAACTTGATGTGTTACCTGGGGCCGAATTCCGAGTGGCATTTGAGGAAGCAATGAGTTATGGCGGCAAAGTTATCCTTGGAGATCGCCCTGTCCAGATCACTTTGAGAAGGACTTGGGGGAGAATGTCATTATGGCACAGGGCAAAGTTTTTGTACTACATTGTTTTCCAGTCCATATTTTTACCAAGCCCGGAGGAACTTAATAAAATGCTGAAGGACATGGAGGATGTTGACATGCTAACACTTGTTATTCAAGAGATGAGTAAGGCATTTCCTACCTTGATGGAGACACTCCTACATGAACGTGATATGTATATGTCCTCCAAATTATTGAAGGTAGCAAAGGAACATTCCTCGGTGGTGGCAGTTGTAGGAAAAGGGCATGTTTCTGGAATAAAGAAAAATTGGGAACAACCAATCGAGATAGAAAGTTTACTGGTATTACCAGTGACTAAGCAAGGTGCTTCAAAGATGAAAATTTTGGCATCCATTGGAGCATTAGGTGGTGTAGTAATAGCAACCGGAATCTACATATGGAGTAGAAAATAA</cdnaseq>

Protein Sequence

<aaseq>MDPAADGEGGGYEDASEFADAETGGGEVVRGEGEGERERKELPEELAKGVVCLECETSPEAEAAGAGGTCRVYVVGTAHVSQESCDQVKAVIDYLKPQAVFLELCASRVAILTPQNLQVPTMNEMIDMWKKKKMNTFGILYSWFLAKVASQLDVLPGAEFRVAFEEAMSYGGKVILGDRPVQITLRRTWGRMSLWHRAKFLYYIVFQSIFLPSPEELNKMLKDMEDVDMLTLVIQEMSKAFPTLMETLLHERDMYMSSKLLKVAKEHSSVVAVVGKGHVSGIKKNWEQPIEIESLLVLPVTKQGASKMKILASIGALGGVVIATGIYIWSRK</aaseq>

Gene Sequence

<dnaseqindica>1..246#936..983#1128..1187#1802..1888#1987..2091#2736..2849#2997..3097#3183..3294#3425..3550#ATGGATCCGGCCGCCGACGGCGAGGGCGGGGGCTACGAGGACGCGTCGGAGTTCGCCGACGCGGAGACGGGCGGGGGAGAGGTGGTGCGGGGGGAGGGGGAGGGGGAGAGGGAGAGGAAGGAGCTGCCCGAGGAGCTCGCCAAGGGGGTGGTGTGCCTCGAGTGCGAGACGTCGCCCGAGGCGGAGGCGGCGGGGGCGGGCGGGACCTGCCGCGTCTACGTCGTCGGCACCGCCCATGTTTCACAGGTGAATTGGCCTCCTCGTCAGCTCGATATATGATGTAGCCTCGAACTTTTTGGAGAACACCTAGGGGACGATCTGGTCTCGATTTATTTGGATTGCGGGTTCGCATTAGTCCAAATTTTAAGTTTTCACTAGTAACTTAGTTCAAATTTCGTTAGTAACTTATTTAGGAAGTGAAGAACTTGCAGGGTTGAGATTACCAGTGAAAAAAAAGAAAAAACTGGAGAGCGAAACACAGCAAACATGTAGGGCCTGTTTGGTAGAGCTCCAACTCATAAATTTAACTCCAGGAGTTGGGTCTGGAGTAGAGTTGTGGAGCTGCCTAAACCAGGTTCTACATCTCTAGTTCATTTTGTGAGAGCGCTCCACCTAGCCCCGCTCCCATTTTAGGTGGAACTAAAACTGTTTGGCTGAGCTCCAACTCTAGAAGAGAGGTGGAGCTGAAGCTGAAGCTGTGCCAAACAGGCTCGTAAAATCCTCATGAACACGAACTGTACCAACAAAAGACTACCCTTTTTTCCTTTATAGTAATTTATATAGACGTGTATTTGTAGTGGTAGTGGTAGCGCTATGACCGATGCAAATTTAGTTAACTGTTGTTGTGTCCTGTACTTTCAACTTATATGCATCAAAGTCGCGCTTACTATGATTATACTGTGGATTGAATATTCGTATGTTGATTCACTTTGTAGGAATCATGTGACCAAGTAAAAGCCGTCATCGACTACCTGAAACCTCAGGTTCTTCCTCTTTTTACTCATCACCGATAATTTACCAGTTGGTGAATCATTTGGCAGGTTGGCTGCCTTCTTGTGGAGTGCTTATTGATAATTGATCCGGAACACCTTATACTAATTATTTTAACACCTCTTTAACAAATGTAGGCTGTTTTCTTGGAGCTCTGTGCCAGCAGAGTCGCCATTCTGACACCACAAAACCTTCAGGTATGATCATGCAGAATTTACTTCATTTTGGGTTGTCATGTTTGTTACCTATGTACATTGCACGAGGAAGGGAACACTTTCCTCTTTTTTTTGTTTGAGGTTATTGTACATGTAAAAACTGAATGAATTATGAACCATGAGAATACACTATGAGAGTGCTGAAGTCTATTGTCGTCTGATTTTTGTCTGTTATATTCCCTCAAATAGTGAATACAAACTATTTAGAGTGATAATGTGGTTCTATACTTCATGGAATTAAGCTCAACTGGGAAAAGATATCTCTTGTGGATATATCTCTTACAACACTGGTTAAGATTTATTTACGCGAGAGAATTAGAAGTTGGAATTATGGCAGTGGCATTGTATTGCATTTTCGTATTGGCAATTGGCATGGATGGCCATGCCAAAGACTATCTGATCAATCATAAATAGGAGCCAGTGCTGACATGCCTTCTATCAGTATTTGATTAAGTGCATATAACTTATAGCACTATGCTAGTGTGTAGCAACAGACTTTAGCCTTATTAATGGTTTACAGCCATCATTGACATAAGTGTTCGAGATGTTATATCTACTCGTAGTTAACTTGTTTTATCATTCTGTTATCATCATAGGTTCCTACCATGAACGAAATGATTGACATGTGGAAGAAAAAGAAGATGAACACTTTTGGAATACTCTACAGCTGGTTTCTTGCAAAGGTATGCCTTGATGCTTGTTTTGCAGTTCGTACTTATTGTTAGGTAAGTTTTTTAAAAAAAAAAAATTTACATGGTGGTCTATGTTTTTGGCATCCAAGGTTGCTAGCCAACTTGATGTGTTACCTGGGGCCGAATTCCGAGTGGCATTTGAGGAAGCAATGAGTTATGGCGGCAAAGTTATCCTTGGAGATCGCCCTGTCCAGGTATGCAACCTACTTATCTAGTGGTTGAATTTGGTTGTCTATAACCTCCATACAGGTTATAGATAGATGCAAGAAGAAGAAGGGAGAGGATATTCATAACAGCTGACTGGCTGTGCCAATTTAAGGTTCATACGTGGATAAATATGATAAACTTTTAGTGTGGATTTTTTTGTGAACCTAGTACAAACAAATGATAACAGTTTATTATGTTACCTCAAGTTAAGCAACCACGTATTCATGCTATTGACTTTTTCACTTGTCATTATTTTGAATTGTGATGAGATATTTTTATCATAATGGTGCATCTTTTGACATGACATCTGGAAAAAAACTACATATTTTTCAAATGTTCATCACATCTGGCTGATTGGATGGAATAAAAGATAGTTGCCACTGTTTGCTTGCGTCTTAATCTTTTGCTATATGATATGGACTAATGAGGTTAGATATTTTGTTATTTAACTCAAAAGTTGAGATGTACTCCATATCTTGTTACAATGATCTCTATCATATAGAAGATTTGATTAATAGAATATGAATCTTGATATCGTTAGAACTTTCTACAGAATAAACAATAGTTTGGTCAGTACTTATATTTCATTAGCAGTGGTGCCATCTTATCATCGTCTTTATCTGTTTCGAAGATCACTTTGAGAAGGACTTGGGGGAGAATGTCATTATGGCACAGGGCAAAGTTTTTGTACTACATTGTTTTCCAGTCCATATTTTTACCAAGCCCGGAGGAACTTAATAAAATGGTATGATGTCTTCCTGGATGACTTGAAATGTACAGTTCTAGTGTGTGATTTCATATAACTCAATATACTTTCTAGACTTTAGTATAGATAGACAATTAACCAGACTTTACTCCATTTGCATAGCAATGACAATGCTTGTCTATACAGCTGAAGGACATGGAGGATGTTGACATGCTAACACTTGTTATTCAAGAGATGAGTAAGGCATTTCCTACCTTGATGGAGACACTCCTACATGAACGTGATATGTGAGTTACTTAAAAAAGTTTGTGTTGATATTCTCGATTACCACCACAATCTTTTGTGCTTGAATTATTGAAATTGTGTTTGCAGGTATATGTCCTCCAAATTATTGAAGGTAGCAAAGGAACATTCCTCGGTGGTGGCAGTTGTAGGAAAAGGGCATGTTTCTGGAATAAAGAAAAATTGGGAACAACCAATCGAGGTTAGATATTTTTAAACAGTGATATGCTTCGTACCAATAGGAAATCCATCATCCATCTAGGTAGTTATTCAACAGAAAAGTTCTGCAGGTTTTAATTTTATATGCACCATTTTTTCAACTTTTCCTGCAGATAGAAAGTTTACTGGTATTACCAGTGACTAAGCAAGGTGCTTCAAAGATGAAAATTTTGGCATCCATTGGAGCATTAGGTGGTGTAGTAATAGCAACCGGAATCTACATATGGAGTAGAAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017782