Difference between revisions of "BGIOSGA017949"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA017949| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017949, complete gene.| tag = OSJNBB0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA017949|
 
GeneName = BGIOSGA017949|

Revision as of 16:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017949

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017949, complete gene.

LocusTag

OSJNBB0012G21.7

Ensembl Transcript ID

BGIOSGA017949-TA

Ensembl Protein ID

BGIOSGA017949-PA

Length

1567

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23279926..23281492

Sequence Coding Region

23280264..23281492,23279926..23280151

Genome Context

<gbrowseImage1> name=IndicaChromosome05:23279926..23281492 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:23279926..23281492 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCCTCCAGGTCGCGGCCGTCGCGCCATCCCCGTGCGCGCGCTCCTCCGCCTCGTCTTCGCCGCCCTCGACATCCTCCTCGCGTCCCGCCCTCGGCGGTGCGGGGCTCGCGAGATCCCGCGCCCCGGTTAATTGGGGCGCCGGTGTTATGGCGCGGCGCCGCGGGTTGCGGCAGCCGGCGAGGTGCGCCCTGAGCGCCAGTTTGGATGGCGTGGGGGGCGGGGACGCGGAGTTCTTGCGGCGGATCGAGGAGCTCGCGGCGGCGGTGGGTGTGCAGCCCACGGGTTGCGGGTGGCCGGCGAGCGTAGAGCGCAGCGCGAGCAGCGCCGGGATGCCTCTGTCGCTCCGGATGCTGAAGCGGAAGAAGCAGCAGCAGCAGCTGGTGGCGCGGCAGACGCGGTGGGACGAGCGGCTGCTGGGCTCCGCCGGCGACTCGGTGGGGCGCGCCTTCTCGTCGATGGTGCTCATCGTGCGGGAGCTGCAGAGCTTCGCGCTGCAGCAGATGCGGGAGGCAATGCTGGGCGACGACCTGCAGAGCGTCCTGGCGCGAGTCCATGGCGAGATGCACGCCTCCTTCGTCTGGCTCTTCCAGCACATCTTCGCCGGCACCCCGGCTCTCATGGTCTCCCTCATGCTCCTCCTCGCCAACTTCACCGTCCACTCCATGGGTCACAGTGTCGCCGCCGCCGCAGCCATCCCTCCCGCTCCGCCTACCTCCGCGGCTGTCGCGGTGGTCGACACCCAGCACGCCGACCCATCCCTCCCGCGGTTCGACGCGGCCTCGGTCAAGACGTTCTCTATTGGGCGTGCCGCCTCGGTCGGCGGGAGCAGCGGCGGTGGCGGGAAGGTTCGGCCCGTCGCGGGCGCCACTGGCGACGACCGGTGGGACGAATCCCTAGCTCGGCTGAGCGGTGTCGCGCCGCAGCAACCAGCGCCGCCGGCGGGAACGGGAGCTGGTATGGCCGAGGACGAGCAGGCCATCTGGGAAAGGATGGTGGCGGAGGCCTCGAACATGCAGGAGAACGCGCGTGCAGAGGAGCTGAGCGACCCGGACGTGCTCGGCAACCTCGTCGCACCGGTGGAGGCGGAGATCGAGACGGAGGGCCACGCTGAGTACACGCGGACGGAGCAGCGGTACGAGCTCGCCGTGTCCGAGGAGCCCAATAACCCGCTCATCCTGGCCAACTTCGCGCAGTTCCTCTACCTCGTGCAGAACGACCACGACCGGGCGGAGCAGTACTTCGAGAGGGCGGTGCGCGCGGAGCCGGCGGACGCGGAGGTGCTGAGCCGGTACGCGACGTTCCTGTGGAAGGCGAGGAACGACCTCGCGGCGGCGGAGGACACCTACCAGGAGGCCATCGCGGCCGACCCCGGCAACGCGCACCATGCCGCCGCCTACGCGCATTTCCTCTGGAACACCGGAGGTGAGGACACATGTTTCCCCCTCGATTGA</cdnaseq>

Protein Sequence

<aaseq>MGLQVAAVAPSPCARSSASSSPPSTSSSRPALGGAGLARSRAPVNWGAGVMARRRGLRQPARCALSASLDGVGGGDAEFLRRIEELAAAVGVQPTGCGWPASVERSASSAGMPLSLRMLKRKKQQQQLVARQTRWDERLLGSAGDSVGRAFSSMVLIVRELQSFALQQMREAMLGDDLQSVLARVHGEMHASFVWLFQHIFAGTPALMVSLMLLLANFTVHSMGHSVAAAAAIPPAPPTSAAVAVVDTQHADPSLPRFDAASVKTFSIGRAASVGGSSGGGGKVRPVAGATGDDRWDESLARLSGVAPQQPAPPAGTGAGMAEDEQAIWERMVAEASNMQENARAEELSDPDVLGNLVAPVEAEIETEGHAEYTRTEQRYELAVSEEPNNPLILANFAQFLYLVQNDHDRAEQYFERAVRAEPADAEVLSRYATFLWKARNDLAAAEDTYQEAIAADPGNAHHAAAYAHFLWNTGGEDTCFPLD</aaseq>

Gene Sequence

<dnaseqindica>1..1229#1342..1567#ATGGGCCTCCAGGTCGCGGCCGTCGCGCCATCCCCGTGCGCGCGCTCCTCCGCCTCGTCTTCGCCGCCCTCGACATCCTCCTCGCGTCCCGCCCTCGGCGGTGCGGGGCTCGCGAGATCCCGCGCCCCGGTTAATTGGGGCGCCGGTGTTATGGCGCGGCGCCGCGGGTTGCGGCAGCCGGCGAGGTGCGCCCTGAGCGCCAGTTTGGATGGCGTGGGGGGCGGGGACGCGGAGTTCTTGCGGCGGATCGAGGAGCTCGCGGCGGCGGTGGGTGTGCAGCCCACGGGTTGCGGGTGGCCGGCGAGCGTAGAGCGCAGCGCGAGCAGCGCCGGGATGCCTCTGTCGCTCCGGATGCTGAAGCGGAAGAAGCAGCAGCAGCAGCTGGTGGCGCGGCAGACGCGGTGGGACGAGCGGCTGCTGGGCTCCGCCGGCGACTCGGTGGGGCGCGCCTTCTCGTCGATGGTGCTCATCGTGCGGGAGCTGCAGAGCTTCGCGCTGCAGCAGATGCGGGAGGCAATGCTGGGCGACGACCTGCAGAGCGTCCTGGCGCGAGTCCATGGCGAGATGCACGCCTCCTTCGTCTGGCTCTTCCAGCACATCTTCGCCGGCACCCCGGCTCTCATGGTCTCCCTCATGCTCCTCCTCGCCAACTTCACCGTCCACTCCATGGGTCACAGTGTCGCCGCCGCCGCAGCCATCCCTCCCGCTCCGCCTACCTCCGCGGCTGTCGCGGTGGTCGACACCCAGCACGCCGACCCATCCCTCCCGCGGTTCGACGCGGCCTCGGTCAAGACGTTCTCTATTGGGCGTGCCGCCTCGGTCGGCGGGAGCAGCGGCGGTGGCGGGAAGGTTCGGCCCGTCGCGGGCGCCACTGGCGACGACCGGTGGGACGAATCCCTAGCTCGGCTGAGCGGTGTCGCGCCGCAGCAACCAGCGCCGCCGGCGGGAACGGGAGCTGGTATGGCCGAGGACGAGCAGGCCATCTGGGAAAGGATGGTGGCGGAGGCCTCGAACATGCAGGAGAACGCGCGTGCAGAGGAGCTGAGCGACCCGGACGTGCTCGGCAACCTCGTCGCACCGGTGGAGGCGGAGATCGAGACGGAGGGCCACGCTGAGTACACGCGGACGGAGCAGCGGTACGAGCTCGCCGTGTCCGAGGAGCCCAATAACCCGCTCATCCTGGCCAACTTCGCGCAGTTCCTCTACCTCGTGCAGAACGACCACGACCGGTAGGCCCCCTCACCCTACGCCCACCACCTGTTCGACGAATTGACCGTCGTGCTCATCTCATCCGAGCCGCGCCACGGTGATCCATTTTGTCTAACCTCCCGTTAATCGCAGGGCGGAGCAGTACTTCGAGAGGGCGGTGCGCGCGGAGCCGGCGGACGCGGAGGTGCTGAGCCGGTACGCGACGTTCCTGTGGAAGGCGAGGAACGACCTCGCGGCGGCGGAGGACACCTACCAGGAGGCCATCGCGGCCGACCCCGGCAACGCGCACCATGCCGCCGCCTACGCGCATTTCCTCTGGAACACCGGAGGTGAGGACACATGTTTCCCCCTCGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017949